Portsclean doesnt like my upgrade from 6.3 > 7.0

[David Southwell]

On Thursday 17 July 2008 06:39:26 Kris Kennaway wrote:
> David Southwell wrote:
> > It looks as though I have missed something!!
> > FreeBSD dns1.vizion2000.net 7.0-STABLE FreeBSD 7.0-STABLE #0: Wed Jul 16
> > 09:27:38 PDT 2008    
> > root at dns1.vizion2000.net:/usr/obj/usr/src/sys/GENERIC amd64
> >
> > [root at dns1 ~]# portsclean
> > FFaattaall  eerrrroorr  ''Thread is not system scope.
> > Thread is not system scope.
> > ''  aatt  lliinnee  331199  iinn
> > ffiillee 
> > /usr/src/lib/libpthread/thread/thr_sig.c/usr/src/lib/libpthread/thread/th
> >r_sig.c ((eerrrrnnoo  ==  22))
> >
> > Segmentation fault: 11 (core dumped)
> >
> > Ok where do I go from here??
>
> Find out which port(s) you didnt recompile as part of the upgrade (e.g.
> check mtime in /usr/local), and do that now.  You may need to also
> recompile the ports that depend on them to undo the damage.
>
> Kris
> _______________________________________________
Thanks Kris
I have been unable to find instructions in the manual about  recompiling ports 
as part of a system upgrade process. There seems to be no reference to it. 
The upgrade from 6.1 to 6.3 seemed to work OK once I sorted out a problem 
with perl. However 6.3 to 7.0 seems to produce more difficulties than I 
bargained for!!!

How can I best reconfigure and recompile all th installed ports?

As you can see from below:
[root at dns1 ~]# portupgrade -a
Fatal error 'Thread is not system scope.
' at line 319 in file /usr/src/lib/libpthread/thread/thr_sig.c (errno = 2)
Segmentation fault: 11 (core dumped)

I have definitely omitted a vital step