Portsclean doesnt like my upgrade from 6.3 > 7.0

[David Southwell]

On Thursday 17 July 2008 07:32:11 Andrew D wrote:
> David Southwell wrote:
> > On Thursday 17 July 2008 06:39:26 Kris Kennaway wrote:
> >> David Southwell wrote:
> >>> It looks as though I have missed something!!
> >>> FreeBSD dns1.vizion2000.net 7.0-STABLE FreeBSD 7.0-STABLE #0: Wed Jul
> >>> 16 09:27:38 PDT 2008
> >>> root at dns1.vizion2000.net:/usr/obj/usr/src/sys/GENERIC amd64
> >>>
> >>> [root at dns1 ~]# portsclean
> >>> FFaattaall  eerrrroorr  ''Thread is not system scope.
> >>> Thread is not system scope.
> >>> ''  aatt  lliinnee  331199  iinn
> >>> ffiillee
> >>> /usr/src/lib/libpthread/thread/thr_sig.c/usr/src/lib/libpthread/thread/
> >>>th r_sig.c ((eerrrrnnoo  ==  22))
> >>>
> >>> Segmentation fault: 11 (core dumped)
> >>>
> >>> Ok where do I go from here??
> >>
> >> Find out which port(s) you didnt recompile as part of the upgrade (e.g.
> >> check mtime in /usr/local), and do that now.  You may need to also
> >> recompile the ports that depend on them to undo the damage.
> >>
> >> Kris
> >> _______________________________________________
> >
> > Thanks Kris
> > I have been unable to find instructions in the manual about  recompiling
> > ports as part of a system upgrade process. There seems to be no reference
> > to it. The upgrade from 6.1 to 6.3 seemed to work OK once I sorted out a
> > problem with perl. However 6.3 to 7.0 seems to produce more difficulties
> > than I bargained for!!!
> >
> > How can I best reconfigure and recompile all th installed ports?
> >
> > As you can see from below:
> > [root at dns1 ~]# portupgrade -a
> > Fatal error 'Thread is not system scope.
> > ' at line 319 in file /usr/src/lib/libpthread/thread/thr_sig.c (errno =
> > 2) Segmentation fault: 11 (core dumped)
>
> I saw this not too long ago, The culprit was ruby.
>
> Go into each of these ports and
> 'make clean && make && make deinstall reinstall' them
>
> lang/ruby18 (I assume)
> databases/ruby-bdb
> ports-mgmt/portupgrade
>
> you might have blow away /var/db/pkg/pkgdb.db a couple of times for it
> to work.
>
> Then portupgrade should work fine :)
>
Right on the nail
!!

I now have portupgrade -af fulfilling its magic

Thank you and everyone else.

David