portupgrade issue
Joe Kelsey
joe at zircon.seattle.wa.us
Mon May 26 18:17:32 PDT 2003
I am running 4.8-STABLE.
I recently did a cvsup (repeatedly, most recently today). Ever since,
portupgrade dies with the following messages:
zircon# portupgrade -r pkgconfig
/usr/local/lib/ruby/site_ruby/1.6/pkgdb.rb:310:in `deorigin': failed to
convert nil into String (PkgDB::DBError)
from /usr/local/lib/ruby/site_ruby/1.6/pkgdb.rb:903:in
`tsort_build'
from /usr/local/lib/ruby/site_ruby/1.6/pkgdb.rb:902:in `each'
from /usr/local/lib/ruby/site_ruby/1.6/pkgdb.rb:902:in
`tsort_build'
from /usr/local/lib/ruby/site_ruby/1.6/pkgdb.rb:894:in `each'
from /usr/local/lib/ruby/site_ruby/1.6/pkgdb.rb:894:in
`tsort_build'
from /usr/local/lib/ruby/site_ruby/1.6/pkgdb.rb:916:in
`sort_build'
from /usr/local/lib/ruby/site_ruby/1.6/pkgdb.rb:920:in
`sort_build!'
from /usr/local/sbin/portupgrade:674:in `main'
from /usr/local/sbin/portupgrade:207:in `initialize'
from /usr/local/sbin/portupgrade:207:in `new'
from /usr/local/sbin/portupgrade:207:in `main'
from /usr/local/sbin/portupgrade:1846
I have removed INDEX and INDEX.db, run make INDEX, run portsdb -Uu more
times than I cancount, yet nothing works.
Last time I ran portsdb -Uu, this is wat it produced:
zircon# portsdb -Uu
Updating the ports index ... zh-bg5pdf-1.0.0:"/usr/ports/print/pdflib3"
non-existent -- dependency list incomplete
"Makefile", line 17: Could not find
/usr/ports/chinese/kde2-i18n/../../misc/kde2-i18n/Makefile: malformed
entry: "Makefile", line 17: Could not find
/usr/ports/chinese/kde2-i18n/../../misc/kde2-i18n/Makefile
make: fatal errors encountered -- cannot continue: malformed entry:
make: fatal errors encountered -- cannot continue
*** Error code 1: malformed entry: *** Error code 1
zh-libtabe-0.2.2:"/usr/ports/databases/db" non-existent -- dependency
list incomplete
zh_TW-netscape-communicator-linux-4.77:"/usr/ports/www/linux-netscape47-communicator" non-existent -- dependency list incomplete
zh_TW-netscape-navigator-linux-4.77:"/usr/ports/www/linux-netscape47-navigator" non-existent -- dependency list incomplete
zh_TW-netscape-navigator-4.76:"/usr/ports/www/libxpg4-ns" non-existent
-- dependency list incomplete
zh_TW-netscape-communicator-4.76:"/usr/ports/www/libxpg4-ns"
non-existent -- dependency list incomplete
zh-xcin-2.5.2.3_1:"/usr/ports/databases/db" non-existent -- dependency
list incomplete
"Makefile", line 21: Could not find
/usr/ports/chinese/xmms/../../audio/xmms/Makefile: malformed entry:
"Makefile", line 21: Could not find
/usr/ports/chinese/xmms/../../audio/xmms/Makefile
make: fatal errors encountered -- cannot continue: malformed entry:
make: fatal errors encountered -- cannot continue
*** Error code 1: malformed entry: *** Error code 1
`all' not remade because of errors.: malformed entry: `all' not remade
because of errors.
"Makefile", line 17: Could not find
/usr/ports/french/kde2-i18n/../../misc/kde2-i18n/Makefile: malformed
entry: "Makefile", line 17: Could not find
/usr/ports/french/kde2-i18n/../../misc/kde2-i18n/Makefile
make: fatal errors encountered -- cannot continue: malformed entry:
make: fatal errors encountered -- cannot continue
*** Error code 1: malformed entry: *** Error code 1
fr-koffice-i18n-1.2.1:"/usr/ports/hebrew/koffice-i18n" non-existent --
dependency list incomplete
fr-koffice-i18n-1.2.1:"/usr/ports/chinese/koffice-i18n-zh_TW"
non-existent -- dependency list incomplete
`all' not remade because of errors.: malformed entry: `all' not remade
because of errors.
"Makefile", line 17: Could not find
/usr/ports/german/kde2-i18n/../../misc/kde2-i18n/Makefile: malformed
entry: "Makefile", line 17: Could not find
/usr/ports/german/kde2-i18n/../../misc/kde2-i18n/Makefile
make: fatal errors encountered -- cannot continue: malformed entry:
make: fatal errors encountered -- cannot continue
*** Error code 1: malformed entry: *** Error code 1
de-koffice-i18n-1.2.1:"/usr/ports/hebrew/koffice-i18n" non-existent --
dependency list incomplete
de-koffice-i18n-1.2.1:"/usr/ports/chinese/koffice-i18n-zh_TW"
non-existent -- dependency list incomplete
`all' not remade because of errors.: malformed entry: `all' not remade
because of errors.
ja-ghostscript-gnu-cjk-6.52:"/usr/ports/print/ghostscript-gnu-cjk"
non-existent -- dependency list incomplete
"Makefile", line 15: Could not find
/usr/ports/japanese/gp/../../print/gp/Makefile: malformed entry:
"Makefile", line 15: Could not find
/usr/ports/japanese/gp/../../print/gp/Makefile
make: fatal errors encountered -- cannot continue: malformed entry:
make: fatal errors encountered -- cannot continue
*** Error code 1: malformed entry: *** Error code 1
"Makefile", line 17: Could not find
/usr/ports/japanese/kde2-i18n/../../misc/kde2-i18n/Makefile: malformed
entry: "Makefile", line 17: Could not find
/usr/ports/japanese/kde2-i18n/../../misc/kde2-i18n/Makefile
make: fatal errors encountered -- cannot continue: malformed entry:
make: fatal errors encountered -- cannot continue
*** Error code 1: malformed entry: *** Error code 1
"Makefile", line 23: Could not find
/usr/ports/japanese/kdeaddons/../../misc/kdeaddons/Makefile: malformed
entry: "Makefile", line 23: Could not find
/usr/ports/japanese/kdeaddons/../../misc/kdeaddons/Makefile
make: fatal errors encountered -- cannot continue: malformed entry:
make: fatal errors encountered -- cannot continue
*** Error code 1: malformed entry: *** Error code 1
"Makefile", line 22: Could not find
/usr/ports/japanese/kdebase2/../../x11/kdebase2/Makefile: malformed
entry: "Makefile", line 22: Could not find
/usr/ports/japanese/kdebase2/../../x11/kdebase2/Makefile
"Makefile", line 22: Could not find
/usr/ports/japanese/kdelibs2/../../x11/kdelibs2/Makefile: malformed
entry: "Makefile", line 22: Could not find
/usr/ports/japanese/kdelibs2/../../x11/kdelibs2/Makefile
make: fatal errors encountered -- cannot continue: malformed entry:
make: fatal errors encountered -- cannot continue
*** Error code 1: malformed entry: *** Error code 1
make: fatal errors encountered -- cannot continue: malformed entry:
make: fatal errors encountered -- cannot continue
*** Error code 1: malformed entry: *** Error code 1
"Makefile", line 25: Could not find
/usr/ports/japanese/kdenetwork2/../../net/kdenetwork2/Makefile:
malformed entry: "Makefile", line 25: Could not find
/usr/ports/japanese/kdenetwork2/../../net/kdenetwork2/Makefile
make: fatal errors encountered -- cannot continue: malformed entry:
make: fatal errors encountered -- cannot continue
*** Error code 1: malformed entry: *** Error code 1
ja-koffice-i18n-1.2.1:"/usr/ports/hebrew/koffice-i18n" non-existent --
dependency list incomplete
ja-koffice-i18n-1.2.1:"/usr/ports/chinese/koffice-i18n-zh_TW"
non-existent -- dependency list incomplete
ja-netscape-communicator-linux-4.79:"/usr/ports/www/linux-netscape47-communicator" non-existent -- dependency list incomplete
ja-netscape-navigator-linux-4.79:"/usr/ports/www/linux-netscape47-navigator" non-existent -- dependency list incomplete
ja-lookup-xemacs21-mule-1.3:"/usr/ports/editors/xemacs-games-packages"
non-existent -- dependency list incomplete
ja-lookup-xemacs21-mule-1.3:"/usr/ports/editors/xemacs-games-packages"
non-existent -- dependency list incomplete
ja-mypaedia-fpw-package-1.0.6:"/usr/ports/graphics/xanim" non-existent
-- dependency list incomplete
ja-netscape-3.04:"/usr/ports/www/netscape3" non-existent -- dependency
list incomplete
ja-netscape-communicator-4.08:"/usr/ports/www/netscape4-communicator"
non-existent -- dependency list incomplete
ja-netscape-navigator-4.08:"/usr/ports/www/netscape4-navigator"
non-existent -- dependency list incomplete
ja-netypesv-0.1.0:"/usr/ports/java/jdk12-beta" non-existent --
dependency list incomplete
ja-rbnamazu-0.4:"/usr/ports/devel/ruby-optparse" non-existent --
dependency list incomplete
"Makefile", line 15: Could not find
/usr/ports/japanese/xemacs21-sumo-canna/../../editors/xemacs21-sumo/Makefile: malformed entry: "Makefile", line 15: Could not find /usr/ports/japanese/xemacs21-sumo-canna/../../editors/xemacs21-sumo/Makefile
make: fatal errors encountered -- cannot continue: malformed entry:
make: fatal errors encountered -- cannot continue
*** Error code 1: malformed entry: *** Error code 1
"Makefile", line 15: Could not find
/usr/ports/japanese/xemacs21-sumo-canna+freewnn/../../editors/xemacs21-sumo/Makefile: malformed entry: "Makefile", line 15: Could not find /usr/ports/japanese/xemacs21-sumo-canna+freewnn/../../editors/xemacs21-sumo/Makefile
make: fatal errors encountered -- cannot continue: malformed entry:
make: fatal errors encountered -- cannot continue
*** Error code 1: malformed entry: *** Error code 1
"Makefile", line 15: Could not find
/usr/ports/japanese/xemacs21-sumo-canna+wnn6/../../editors/xemacs21-sumo/Makefile: malformed entry: "Makefile", line 15: Could not find /usr/ports/japanese/xemacs21-sumo-canna+wnn6/../../editors/xemacs21-sumo/Makefile
make: fatal errors encountered -- cannot continue: malformed entry:
make: fatal errors encountered -- cannot continue
*** Error code 1: malformed entry: *** Error code 1
"Makefile", line 15: Could not find
/usr/ports/japanese/xemacs21-sumo-wnn6/../../editors/xemacs21-sumo/Makefile: malformed entry: "Makefile", line 15: Could not find /usr/ports/japanese/xemacs21-sumo-wnn6/../../editors/xemacs21-sumo/Makefile
make: fatal errors encountered -- cannot continue: malformed entry:
make: fatal errors encountered -- cannot continue
*** Error code 1: malformed entry: *** Error code 1
"Makefile", line 15: Could not find
/usr/ports/japanese/xemacs21-sumo-freewnn/../../editors/xemacs21-sumo/Makefile: malformed entry: "Makefile", line 15: Could not find /usr/ports/japanese/xemacs21-sumo-freewnn/../../editors/xemacs21-sumo/Makefile
make: fatal errors encountered -- cannot continue: malformed entry:
make: fatal errors encountered -- cannot continue
*** Error code 1: malformed entry: *** Error code 1
`all' not remade because of errors.: malformed entry: `all' not remade
because of errors.
ko-ghostscript-gnu-cjk-6.52:"/usr/ports/print/ghostscript-gnu-cjk"
non-existent -- dependency list incomplete
"Makefile", line 17: Could not find
/usr/ports/korean/kde2-i18n/../../misc/kde2-i18n/Makefile: malformed
entry: "Makefile", line 17: Could not find
/usr/ports/korean/kde2-i18n/../../misc/kde2-i18n/Makefile
make: fatal errors encountered -- cannot continue: malformed entry:
make: fatal errors encountered -- cannot continue
*** Error code 1: malformed entry: *** Error code 1
ko-netscape-communicator-linux-4.79:"/usr/ports/www/linux-netscape47-communicator" non-existent -- dependency list incomplete
ko-netscape-navigator-linux-4.79:"/usr/ports/www/linux-netscape47-navigator" non-existent -- dependency list incomplete
ko-netscape-3.04:"/usr/ports/www/netscape3" non-existent -- dependency
list incomplete
ko-netscape-communicator-4.08:"/usr/ports/www/netscape4-communicator"
non-existent -- dependency list incomplete
ko-netscape-navigator-4.08:"/usr/ports/www/netscape4-navigator"
non-existent -- dependency list incomplete
`all' not remade because of errors.: malformed entry: `all' not remade
because of errors.
pmail-0.5.3_2:"" non-existent -- dependency list incomplete
pmail-0.5.3_2:"/usr/ports/devel/pop3lite-0.2.4a" non-existent --
dependency list incomplete
libglade gal.23:/usr/ports/x11-toolkits/gal
glibwww.1:/usr/ports/www/glibwww gtkhtml-1.1.3:/usr/ports/www/gtkhtml
panel_applet.5:/usr/ports/x11/libpanel: malformed entry: libglade
gal.23:/usr/ports/x11-toolkits/gal glibwww.1:/usr/ports/www/glibwww
gtkhtml-1.1.3:/usr/ports/www/gtkhtml
panel_applet.5:/usr/ports/x11/libpanel|/usr/local/lib/python2.2/site-packages/gtk-1.2/_gnomemodule.so:/usr/ports/x11-toolkits/py-gnome /usr/local/bin/python2.2:/usr/ports/lang/python /usr/X11R6/share/gnome/.keep_me:/usr/ports/misc/gnomehier |
"/usr/ports/mail/sendmail-ldap/../sendmail/Makefile", line 196: Could
not find /usr/ports/security/openssl/Makefile.ssl: malformed entry:
"/usr/ports/mail/sendmail-ldap/../sendmail/Makefile", line 196: Could
not find /usr/ports/security/openssl/Makefile.ssl
make: fatal errors encountered -- cannot continue: malformed entry:
make: fatal errors encountered -- cannot continue
*** Error code 1: malformed entry: *** Error code 1
"/usr/ports/mail/sendmail-sasl/../sendmail/Makefile", line 196: Could
not find /usr/ports/security/openssl/Makefile.ssl: malformed entry:
"/usr/ports/mail/sendmail-sasl/../sendmail/Makefile", line 196: Could
not find /usr/ports/security/openssl/Makefile.ssl
make: fatal errors encountered -- cannot continue: malformed entry:
make: fatal errors encountered -- cannot continue
*** Error code 1: malformed entry: *** Error code 1
`all' not remade because of errors.: malformed entry: `all' not remade
because of errors.
kde-i18n-3.1.2:"/usr/ports/japanese/kde3-i18n" non-existent --
dependency list incomplete
kde-i18n-3.1.2:"/usr/ports/french/kde3-i18n" non-existent -- dependency
list incomplete
kde-i18n-3.1.2:"/usr/ports/german/kde3-i18n" non-existent -- dependency
list incomplete
kde-i18n-3.1.2:"/usr/ports/hebrew/kde3-i18n" non-existent -- dependency
list incomplete
kde-i18n-3.1.2:"/usr/ports/korean/kde3-i18n" non-existent -- dependency
list incomplete
kde-i18n-3.1.2:"/usr/ports/russian/kde3-i18n" non-existent -- dependency
list incomplete
kde-i18n-3.1.2:"/usr/ports/vietnamese/kde3-i18n" non-existent --
dependency list incomplete
kde-i18n-3.1.2:"/usr/ports/chinese/kde3-i18n-zh_CN" non-existent --
dependency list incomplete
kde-i18n-3.1.2:"/usr/ports/chinese/kde3-i18n-zh_TW" non-existent --
dependency list incomplete
koffice-i18n-1.2.1:"/usr/ports/hebrew/koffice-i18n" non-existent --
dependency list incomplete
koffice-i18n-1.2.1:"/usr/ports/chinese/koffice-i18n-zh_TW" non-existent
-- dependency list incomplete
gfontview-0.5.0_2:"" non-existent -- dependency list incomplete
gfontview-0.5.0_2:"/usr/ports/www/gtkhtmggv-1.0.2_2" non-existent --
dependency list incomplete
l panel_applet.5:/usr/ports/x11/libpanel: malformed entry: l
panel_applet.5:/usr/ports/x11/libpanel|
/usr/X11R6/share/gnome/.keep_me:/usr/ports/misc/gnomehier |
ru-koffice-i18n-1.1.1:"/usr/ports/editors/koffice" non-existent --
dependency list incomplete
galeon2-1.3.4:"" non-existent -- dependency list incomplete
galeon2-1.3.4:"/usrgallery-1.3.3" non-existent -- dependency list
incomplete
/ports/devel/libbonobo gconf-2.5:/usr/ports/devel/gconf2
gnomevfs-2.0:/usr/ports/devel/gnomevfs2
gnomecanvas-2.200:/usr/ports/graphics/libgnomecanvas
art_lgpl_2.5:/usr/ports/graphics/libart_lgpl2
gnome-2.200:/usr/ports/x11/libgnome
bonoboui-2.0:/usr/ports/x11-toolkits/libbonoboui
gnomeui-2.200:/usr/ports/x11-toolkits/libgnomeui: malformed entry:
/ports/devel/libbonobo gconf-2.5:/usr/ports/devel/gconf2
gnomevfs-2.0:/usr/ports/devel/gnomevfs2
gnomecanvas-2.200:/usr/ports/graphics/libgnomecanvas
art_lgpl_2.5:/usr/ports/graphics/libart_lgpl2
gnome-2.200:/usr/ports/x11/libgnome
bonoboui-2.0:/usr/ports/x11-toolkits/libbonoboui
gnomeui-2.200:/usr/ports/x11-toolkits/libgnomeui|/usr/X11R6/lib/mozilla-gtk2/components/libwidget_gtk2.so:/usr/ports/www/mozilla-gtk2 /usr/X11R6/share/gnome/.keep_me:/usr/ports/misc/gnomehier /usr/X11R6/libdata/pkgconfig/gnome-mime-data-2.0.pc:/usr/ports/misc/gnomemimedata |
nautilus-1.0.6_9:"" non-existent -- dependency list incomplete
nautilus-1.0.6_9:"/usr/portsoffix-files-2.4" non-existent -- dependency
list incomplete
/print/gnomeprint bonobo.2:/usr/ports/devel/bonobo
panel_applet.5:/usr/ports/x11/libpanel: malformed entry:
/print/gnomeprint bonobo.2:/usr/ports/devel/bonobo
panel_applet.5:/usr/ports/x11/libpanel|
/usr/X11R6/share/gnome/.keep_me:/usr/ports/misc/gnomehier
/usr/X11R6/libdata/pkgconfig/gnome-mime-data-2.0.pc:/usr/ports/misc/gnomemimedata |
make_index: ja-netscape-communicator-4.76: no entry for
/usr/ports/www/netscape47-communicator
make_index: zh_TW-netscape-navigator-4.76: no entry for
/usr/ports/www/netscape47-navigator
make_index: ko-netscape-navigator-4.76: no entry for
/usr/ports/www/netscape47-navigator
make_index: ja-netscape-navigator-4.76: no entry for
/usr/ports/www/netscape47-navigator
make_index: pmail-0.5.3_2: no entry for /usr/local
make_index: pmail-0.5.3_2: no entry for /usr/local
make_index: gfontview-0.5.0_2: no entry for /usr/X11R6
make_index: gfontview-0.5.0_2: no entry for /usr/X11R6
make_index: ja-kde-2.2.2_1: no entry for /usr/ports/japanese/kdebase2
make_index: ja-kde-2.2.2_1: no entry for /usr/ports/japanese/kdelibs2
make_index: ja-kde-2.2.2_1: no entry for /usr/ports/japanese/kde2-i18n
make_index: ja-kde-2.2.2_1: no entry for /usr/ports/japanese/kdeaddons
make_index: ja-kde-2.2.2_1: no entry for /usr/ports/japanese/kdebase2
make_index: ja-kde-2.2.2_1: no entry for /usr/ports/japanese/kdelibs2
make_index: ja-kde-2.2.2_1: no entry for /usr/ports/japanese/kdenetwork2
make_index: ru-netscape-4.7: no entry for
/usr/ports/www/netscape47-communicatormake_index: gnome-1.4.1b2_2: no
entry for /usr/ports/print/ggv
make_index: ko-netscape-communicator-4.76: no entry for
/usr/ports/www/netscape47-communicator
make_index: galeon2-1.3.4: no entry for /usr/local
make_index: galeon2-1.3.4: no entry for /usr/local
make_index: zh_TW-netscape-communicator-4.76: no entry for
/usr/ports/www/netscape47-communicator
make_index: nautilus-1.0.6_9: no entry for /usr/X11R6
make_index: nautilus-1.0.6_9: no entry for /usr/X11R6
Out of memory!
Attempt to free unreferenced scalar at Tools/make_index line 44, <>
chunk 8624.
Attempt to free unreferenced scalar at Tools/make_index line 44, <>
chunk 8624.
Attempt to free unreferenced scalar at Tools/make_index line 44, <>
chunk 8624.
Attempt to free unreferenced scalar at Tools/make_index line 44, <>
chunk 8624.
Attempt to free unreferenced scalar at Tools/make_index line 44, <>
chunk 8624.
Attempt to free unreferenced scalar at Tools/make_index line 44, <>
chunk 8624.
Attempt to free unreferenced scalar at Tools/make_index line 44, <>
chunk 8624.
Attempt to free unreferenced scalar at Tools/make_index line 44, <>
chunk 8624.
Attempt to free unreferenced scalar at Tools/make_index line 44, <>
chunk 8624.
Attempt to free unreferenced scalar at Tools/make_index line 44, <>
chunk 8624.
Attempt to free unreferenced scalar at Tools/make_index line 44, <>
chunk 8624.
Attempt to free unreferenced scalar at Tools/make_index line 44, <>
chunk 8624.
Attempt to free unreferenced scalar at Tools/make_index line 44, <>
chunk 8624.
Attempt to free unreferenced scalar at Tools/make_index line 44, <>
chunk 8624.
Attempt to free unreferenced scalar at Tools/make_index line 44, <>
chunk 8624.
Attempt to free unreferenced scalar at Tools/make_index line 44, <>
chunk 8624.
Attempt to free unreferenced scalar at Tools/make_index line 44, <>
chunk 8624.
Attempt to free unreferenced scalar at Tools/make_index line 44, <>
chunk 8624.
Attempt to free unreferenced scalar at Tools/make_index line 44, <>
chunk 8624.
Attempt to free unreferenced scalar at Tools/make_index line 44, <>
chunk 8624.
Attempt to free unreferenced scalar at Tools/make_index line 44, <>
chunk 8624.
Attempt to free unreferenced scalar at Tools/make_index line 44, <>
chunk 8624.
Attempt to free unreferenced scalar at Tools/make_index line 44, <>
chunk 8624.
Attempt to free unreferenced scalar at Tools/make_index line 44, <>
chunk 8624.
Attempt to free unreferenced scalar at Tools/make_index line 44, <>
chunk 8624.
Attempt to free unreferenced scalar at Tools/make_index line 44, <>
chunk 8624.
Attempt to free unreferenced scalar at Tools/make_index line 44, <>
chunk 8624.
Attempt to free unreferenced scalar at Tools/make_index line 44, <>
chunk 8624.
done
[Updating the portsdb <format:bdb1_btree> in /usr/ports ... - 2338 port
entries found .........1000.........2000.../usr/ports/INDEX:2338:Port
info line must consist of 10 fields.
..... done]
If anyone has any suggestions, I would appreciate the help.
/Joe
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