git: 6a226290f3c8 - main - biology/py-pybigwig: remove, duplicate of biology/py-bigwig

The branch main has been updated by antoine:

URL: https://cgit.FreeBSD.org/ports/commit/?id=6a226290f3c82253f50151496168e5d1d1bb13c0

commit 6a226290f3c82253f50151496168e5d1d1bb13c0
Author:     Antoine Brodin <antoine@FreeBSD.org>
AuthorDate: 2021-10-13 18:57:58 +0000
Commit:     Antoine Brodin <antoine@FreeBSD.org>
CommitDate: 2021-10-13 18:57:58 +0000

    biology/py-pybigwig: remove, duplicate of biology/py-bigwig
---
 biology/Makefile                         |  1 -
 biology/py-pybigwig/Makefile             | 22 ----------------------
 biology/py-pybigwig/distinfo             |  3 ---
 biology/py-pybigwig/files/patch-setup.py | 11 -----------
 biology/py-pybigwig/pkg-descr            |  5 -----
 5 files changed, 42 deletions(-)

diff --git a/biology/Makefile b/biology/Makefile
index 3ed28258459c..cb8f76a6ddb9 100644
--- a/biology/Makefile
+++ b/biology/Makefile
@@ -161,7 +161,6 @@
     SUBDIR += py-orange3-single-cell
     SUBDIR += py-pandas-charm
     SUBDIR += py-py2bit
-    SUBDIR += py-pybigwig
     SUBDIR += py-pyfaidx
     SUBDIR += py-pysam
     SUBDIR += py-python-libsbml
diff --git a/biology/py-pybigwig/Makefile b/biology/py-pybigwig/Makefile
deleted file mode 100644
index 4ec67e50a3c3..000000000000
--- a/biology/py-pybigwig/Makefile
+++ /dev/null
@@ -1,22 +0,0 @@
-PORTNAME=	pyBigWig
-DISTVERSION=	0.3.18
-PORTREVISION=	1
-CATEGORIES=	biology python
-MASTER_SITES=	CHEESESHOP
-PKGNAMEPREFIX=	${PYTHON_PKGNAMEPREFIX}
-
-MAINTAINER=	jwb@FreeBSD.org
-COMMENT=	Python access to bigWig files using libBigWig
-
-LICENSE=	MIT
-LICENSE_FILE=	${WRKSRC}/LICENSE.txt
-
-LIB_DEPENDS=	libcurl.so:ftp/curl
-
-USES=		localbase python
-USE_PYTHON=	autoplist distutils
-
-post-install:
-	@${STRIP_CMD} ${STAGEDIR}${PYTHON_SITELIBDIR}/pyBigWig.cpython-38.so
-
-.include <bsd.port.mk>
diff --git a/biology/py-pybigwig/distinfo b/biology/py-pybigwig/distinfo
deleted file mode 100644
index 35e26a9f88d0..000000000000
--- a/biology/py-pybigwig/distinfo
+++ /dev/null
@@ -1,3 +0,0 @@
-TIMESTAMP = 1617288519
-SHA256 (pyBigWig-0.3.18.tar.gz) = 4c2a8c571b4100ad7c4c318c142eb48558646be52aaab28215a70426f5be31bc
-SIZE (pyBigWig-0.3.18.tar.gz) = 64834
diff --git a/biology/py-pybigwig/files/patch-setup.py b/biology/py-pybigwig/files/patch-setup.py
deleted file mode 100644
index 30a4bc936ca3..000000000000
--- a/biology/py-pybigwig/files/patch-setup.py
+++ /dev/null
@@ -1,11 +0,0 @@
---- setup.py.orig	2021-10-13 13:55:13 UTC
-+++ setup.py
-@@ -69,7 +69,7 @@ setup(name = 'pyBigWig',
-        url = "https://github.com/dpryan79/pyBigWig",
-        download_url = "https://github.com/dpryan79/pyBigWig/tarball/0.3.13",
-        keywords = ["bioinformatics", "bigWig", "bigBed"],
--       classifier = ["Development Status :: 5 - Production/Stable",
-+       classifiers = ["Development Status :: 5 - Production/Stable",
-                      "Intended Audience :: Developers",
-                      "License :: OSI Approved",
-                      "Programming Language :: C",
diff --git a/biology/py-pybigwig/pkg-descr b/biology/py-pybigwig/pkg-descr
deleted file mode 100644
index 111f72f80af6..000000000000
--- a/biology/py-pybigwig/pkg-descr
+++ /dev/null
@@ -1,5 +0,0 @@
-py-bigwig is a python extension, written in C, for quick access to
-bigBed files and access to and creation of bigWig files. This extension
-uses libBigWig for local and remote file access.
-
-WWW: https://github.com/deeptools/pyBigWig