git: 7a9f4b317a0a - main - bio-mocha: Build plugin against bcftools 1.14, the current port
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Date: Tue, 21 Dec 2021 16:17:12 UTC
The branch main has been updated by jwb:
URL: https://cgit.FreeBSD.org/ports/commit/?id=7a9f4b317a0a8eecc36ef8877412eb697b937a60
commit 7a9f4b317a0a8eecc36ef8877412eb697b937a60
Author: Jason W. Bacon <jwb@FreeBSD.org>
AuthorDate: 2021-12-21 16:16:29 +0000
Commit: Jason W. Bacon <jwb@FreeBSD.org>
CommitDate: 2021-12-21 16:17:11 +0000
bio-mocha: Build plugin against bcftools 1.14, the current port
---
biology/bio-mocha/Makefile | 6 ++++--
biology/bio-mocha/distinfo | 6 +++---
2 files changed, 7 insertions(+), 5 deletions(-)
diff --git a/biology/bio-mocha/Makefile b/biology/bio-mocha/Makefile
index a046d5fd95c5..ec134d0530bb 100644
--- a/biology/bio-mocha/Makefile
+++ b/biology/bio-mocha/Makefile
@@ -1,17 +1,18 @@
PORTNAME= bio-mocha
DISTVERSION= 1.13
+PORTREVISION= 1
CATEGORIES= biology
MASTER_SITES= https://software.broadinstitute.org/software/mocha/
DISTFILES+= ${PORTNAME}_${DISTVERSION}-20211015.tar.gz
MAINTAINER= jwb@FreeBSD.org
-COMMENT= bcftools plugin for mosaic chromosomal alteration analysis
+COMMENT= Bcftools plugin for mosaic chromosomal alteration analysis
LICENSE= MIT
LIB_DEPENDS= libhts.so:biology/htslib
BUILD_DEPENDS= bash:shells/bash
-RUN_DEPENDS= bcftools==${PORTVERSION}:biology/bcftools
+RUN_DEPENDS= bcftools>=${PORTVERSION}:biology/bcftools
USES= autoreconf gmake localbase perl5 python:env shebangfix
USE_GITHUB= yes
@@ -19,6 +20,7 @@ USE_PERL5= test
GH_ACCOUNT= samtools
GH_PROJECT= bcftools
+GH_TAGNAME= 1.14
GNU_CONFIGURE= yes
SHEBANG_FILES= misc/* test/test.pl
diff --git a/biology/bio-mocha/distinfo b/biology/bio-mocha/distinfo
index e67e570dfc93..ee4554ecbe66 100644
--- a/biology/bio-mocha/distinfo
+++ b/biology/bio-mocha/distinfo
@@ -1,5 +1,5 @@
-TIMESTAMP = 1638495618
+TIMESTAMP = 1640100283
SHA256 (bio-mocha_1.13-20211015.tar.gz) = e145bb48fea347202e16395ab7d78e7e7314749b8d472a2071f8074004cd63a5
SIZE (bio-mocha_1.13-20211015.tar.gz) = 73627
-SHA256 (samtools-bcftools-1.13_GH0.tar.gz) = 55fbc674ec69e243052e9fb6560eb43d06f45f210e1842ba4dbe33acb394e562
-SIZE (samtools-bcftools-1.13_GH0.tar.gz) = 3133637
+SHA256 (samtools-bcftools-1.13-1.14_GH0.tar.gz) = c9a814b1f0a13af19b45283f039d01b524e011d870ac95cd92e6907c3d1db6d1
+SIZE (samtools-bcftools-1.13-1.14_GH0.tar.gz) = 3326994