svn commit: r512462 - head/biology/p5-TrimGalore
Jason W. Bacon
jwb at FreeBSD.org
Sat Sep 21 02:51:27 UTC 2019
Author: jwb
Date: Sat Sep 21 02:51:26 2019
New Revision: 512462
URL: https://svnweb.freebsd.org/changeset/ports/512462
Log:
biology/p5-TrimGalore: Upgrade to 0.6.4
Improved adapter autodetection, minor bug fixes.
Modified:
head/biology/p5-TrimGalore/Makefile
head/biology/p5-TrimGalore/distinfo
Modified: head/biology/p5-TrimGalore/Makefile
==============================================================================
--- head/biology/p5-TrimGalore/Makefile Sat Sep 21 02:44:54 2019 (r512461)
+++ head/biology/p5-TrimGalore/Makefile Sat Sep 21 02:51:26 2019 (r512462)
@@ -1,7 +1,7 @@
# $FreeBSD$
PORTNAME= TrimGalore
-DISTVERSION= 0.6.1
+DISTVERSION= 0.6.4
CATEGORIES= biology perl5 python
PKGNAMEPREFIX= p5-
@@ -11,7 +11,7 @@ COMMENT= Wrapper around Cutadapt and FastQC for adapte
LICENSE= GPLv3
LICENSE_FILE= ${WRKSRC}/LICENSE
-RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}cutadapt>0:biology/py-cutadapt@${PY_FLAVOR} \
+RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}cutadapt>=2.5:biology/py-cutadapt@${PY_FLAVOR} \
fastqc>0:biology/fastqc
# Future: Can 3.4+ be determined from cutadapt dep?
Modified: head/biology/p5-TrimGalore/distinfo
==============================================================================
--- head/biology/p5-TrimGalore/distinfo Sat Sep 21 02:44:54 2019 (r512461)
+++ head/biology/p5-TrimGalore/distinfo Sat Sep 21 02:51:26 2019 (r512462)
@@ -1,3 +1,3 @@
-TIMESTAMP = 1553345061
-SHA256 (FelixKrueger-TrimGalore-0.6.1_GH0.tar.gz) = 658578c29d007fe66f9ab49608442be703a6fcf535db06eb82659c7edccb62b0
-SIZE (FelixKrueger-TrimGalore-0.6.1_GH0.tar.gz) = 26825390
+TIMESTAMP = 1568381106
+SHA256 (FelixKrueger-TrimGalore-0.6.4_GH0.tar.gz) = eb57e18203d8a1dce1397b930a348a9969eebaa758b8a7304d04c22f216cea2d
+SIZE (FelixKrueger-TrimGalore-0.6.4_GH0.tar.gz) = 26827580
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