svn commit: r533731 - head/biology/hyphy
Joseph Mingrone
jrm at FreeBSD.org
Sun May 3 02:08:21 UTC 2020
Author: jrm
Date: Sun May 3 02:08:19 2020
New Revision: 533731
URL: https://svnweb.freebsd.org/changeset/ports/533731
Log:
biology/hyphy: Update to version 2.5.12
Upstream changes:
https://github.com/veg/hyphy/releases/tag/2.5.11
https://github.com/veg/hyphy/releases/tag/2.5.12
Modified:
head/biology/hyphy/Makefile (contents, props changed)
head/biology/hyphy/distinfo (contents, props changed)
head/biology/hyphy/pkg-plist (contents, props changed)
Modified: head/biology/hyphy/Makefile
==============================================================================
--- head/biology/hyphy/Makefile Sun May 3 01:43:11 2020 (r533730)
+++ head/biology/hyphy/Makefile Sun May 3 02:08:19 2020 (r533731)
@@ -1,7 +1,7 @@
# $FreeBSD$
PORTNAME= hyphy
-DISTVERSION= 2.5.10
+DISTVERSION= 2.5.12
CATEGORIES= biology
MAINTAINER= jrm at FreeBSD.org
Modified: head/biology/hyphy/distinfo
==============================================================================
--- head/biology/hyphy/distinfo Sun May 3 01:43:11 2020 (r533730)
+++ head/biology/hyphy/distinfo Sun May 3 02:08:19 2020 (r533731)
@@ -1,3 +1,3 @@
-TIMESTAMP = 1587774446
-SHA256 (veg-hyphy-2.5.10_GH0.tar.gz) = 73e5bfa6a00dfcbe4cc7fd193d2eaa7273b6de62546992dfa19673a969e464fe
-SIZE (veg-hyphy-2.5.10_GH0.tar.gz) = 6104280
+TIMESTAMP = 1588470249
+SHA256 (veg-hyphy-2.5.12_GH0.tar.gz) = ed3659371806efb6542d53ed149758a005884428fc94a27b51f897381368853f
+SIZE (veg-hyphy-2.5.12_GH0.tar.gz) = 6099625
Modified: head/biology/hyphy/pkg-plist
==============================================================================
--- head/biology/hyphy/pkg-plist Sun May 3 01:43:11 2020 (r533730)
+++ head/biology/hyphy/pkg-plist Sun May 3 02:08:19 2020 (r533731)
@@ -176,7 +176,6 @@ lib/hyphy/TemplateBatchFiles/SandNSAmbigs.bf
lib/hyphy/TemplateBatchFiles/SelectionAnalyses/BUSTED.bf
lib/hyphy/TemplateBatchFiles/SelectionAnalyses/BranchSiteREL.bf
lib/hyphy/TemplateBatchFiles/SelectionAnalyses/FADE.bf
-lib/hyphy/TemplateBatchFiles/SelectionAnalyses/FEL-contrast.bf
lib/hyphy/TemplateBatchFiles/SelectionAnalyses/FEL.bf
lib/hyphy/TemplateBatchFiles/SelectionAnalyses/FUBAR.bf
lib/hyphy/TemplateBatchFiles/SelectionAnalyses/MEME.bf
@@ -187,6 +186,7 @@ lib/hyphy/TemplateBatchFiles/SelectionAnalyses/RELAX.b
lib/hyphy/TemplateBatchFiles/SelectionAnalyses/SLAC.bf
lib/hyphy/TemplateBatchFiles/SelectionAnalyses/SingleOmega.bf
lib/hyphy/TemplateBatchFiles/SelectionAnalyses/aBSREL.bf
+lib/hyphy/TemplateBatchFiles/SelectionAnalyses/contrast-fel.bf
lib/hyphy/TemplateBatchFiles/SelectionAnalyses/modules/grid_compute.ibf
lib/hyphy/TemplateBatchFiles/SelectionAnalyses/modules/io_functions.ibf
lib/hyphy/TemplateBatchFiles/SelectionAnalyses/modules/selection_lib.ibf
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