svn commit: r515671 - in head: astro/gnuastro astro/siril audio/p5-Audio audio/snd benchmarks/flowgrind biology/bcftools biology/gemma biology/viennarna comms/gnuradio editors/calligra graphics/enb...
Tobias C. Berner
tcberner at FreeBSD.org
Fri Oct 25 23:41:47 UTC 2019
Author: tcberner
Date: Fri Oct 25 23:41:34 2019
New Revision: 515671
URL: https://svnweb.freebsd.org/changeset/ports/515671
Log:
math/gsl: update to 2.6
- math/p5-Math-GSL does not seem to have any upstream activity to make it work with this version -> mark it broken
- this also breaks the two consumers of this port
- biology/gemma: has a conflict with cblas, and is makred broken.
PR: 241363
Exp-run by: antoine
Modified:
head/astro/gnuastro/Makefile
head/astro/siril/Makefile
head/audio/p5-Audio/Makefile
head/audio/snd/Makefile
head/benchmarks/flowgrind/Makefile
head/biology/bcftools/Makefile
head/biology/gemma/Makefile
head/biology/viennarna/Makefile
head/comms/gnuradio/Makefile
head/editors/calligra/Makefile
head/graphics/enblend/Makefile
head/graphics/inkscape/Makefile
head/graphics/krita/Makefile
head/graphics/luminance-qt5/Makefile
head/graphics/mandelbulber/Makefile
head/graphics/nip2/Makefile
head/graphics/pfstools/Makefile
head/graphics/qgis-ltr/Makefile
head/graphics/qgis/Makefile
head/graphics/xaos/Makefile
head/lang/algol68g/Makefile
head/mail/bogofilter-kc/Makefile
head/mail/bogofilter-lmdb/Makefile
head/mail/bogofilter-sqlite/Makefile
head/mail/bogofilter-tc/Makefile
head/mail/bogofilter/Makefile
head/math/asymptote/Makefile
head/math/deal.ii/Makefile
head/math/dieharder/Makefile
head/math/fflas-ffpack/Makefile
head/math/giacxcas/Makefile
head/math/gsl/Makefile
head/math/gsl/distinfo
head/math/gsl/pkg-plist
head/math/labplot/Makefile
head/math/mandelbulber2/Makefile
head/math/mathgl/Makefile
head/math/mcsim/Makefile
head/math/ocamlgsl/Makefile
head/math/octave-forge-gsl/Makefile
head/math/orpie/Makefile
head/math/p5-Algorithm-KMeans/Makefile
head/math/p5-Math-GSL/Makefile
head/math/pspp/Makefile
head/math/py-cvxopt/Makefile
head/math/py-pygsl/Makefile
head/math/py-pygslodeiv2/Makefile
head/math/rubygem-rb-gsl/Makefile
head/misc/visp/Makefile
head/science/afni/Makefile
head/science/antioch/Makefile
head/science/coot/Makefile
head/science/erkale/Makefile
head/science/fisicalab/Makefile
head/science/getdp/Makefile
head/science/gnudatalanguage/Makefile
head/science/jdftx/Makefile
head/science/kst2/Makefile
head/science/meep/Makefile
head/science/nest/Makefile
head/science/octopus/Makefile
head/science/py-mlpy/Makefile
head/science/scidavis/Makefile
head/science/step/Makefile
Modified: head/astro/gnuastro/Makefile
==============================================================================
--- head/astro/gnuastro/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/astro/gnuastro/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -3,7 +3,7 @@
PORTNAME= gnuastro
PORTVERSION= 0.10
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= astro
MASTER_SITES= GNU
Modified: head/astro/siril/Makefile
==============================================================================
--- head/astro/siril/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/astro/siril/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -2,7 +2,7 @@
PORTNAME= siril
DISTVERSION= 0.9.10
-PORTREVISION= 6
+PORTREVISION= 7
CATEGORIES= astro graphics
MASTER_SITES= https://free-astro.org/download/
Modified: head/audio/p5-Audio/Makefile
==============================================================================
--- head/audio/p5-Audio/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/audio/p5-Audio/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -3,7 +3,7 @@
PORTNAME= Audio
PORTVERSION= 1.029
-PORTREVISION= 3
+PORTREVISION= 4
CATEGORIES= audio perl5
MASTER_SITES= CPAN
PKGNAMEPREFIX= p5-
Modified: head/audio/snd/Makefile
==============================================================================
--- head/audio/snd/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/audio/snd/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -3,7 +3,7 @@
PORTNAME= snd
PORTVERSION= 15.7
-PORTREVISION= 3
+PORTREVISION= 4
CATEGORIES= audio
MASTER_SITES= ftp://ccrma-ftp.stanford.edu/pub/Lisp/ \
SF
Modified: head/benchmarks/flowgrind/Makefile
==============================================================================
--- head/benchmarks/flowgrind/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/benchmarks/flowgrind/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -4,7 +4,7 @@
PORTNAME= flowgrind
PORTVERSION= 0.8.0
DISTVERSIONPREFIX= ${PORTNAME}-
-PORTREVISION= 4
+PORTREVISION= 5
CATEGORIES= benchmarks
MAINTAINER= dbaio at FreeBSD.org
Modified: head/biology/bcftools/Makefile
==============================================================================
--- head/biology/bcftools/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/biology/bcftools/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -3,6 +3,7 @@
PORTNAME= bcftools
PORTVERSION= 1.9
+PORTREVISION= 1
CATEGORIES= biology
MAINTAINER= cartwright at asu.edu
Modified: head/biology/gemma/Makefile
==============================================================================
--- head/biology/gemma/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/biology/gemma/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -2,7 +2,7 @@
PORTNAME= gemma
DISTVERSION= 0.98.1
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= biology
MAINTAINER= jwb at FreeBSD.org
@@ -25,6 +25,8 @@ CXXFLAGS+= -I${LOCALBASE}/include/eigen3 -DOPENBLAS -D
LDFLAGS+= -lopenblas
OPTIONS_DEFINE= EXAMPLES
+
+BROKEN= Conflict between math/gsl and math/cblas constant redeclarations
pre-configure:
@${REINPLACE_CMD} -e 's|../bin/gemma|../gemma|' ${WRKSRC}/test/*.sh
Modified: head/biology/viennarna/Makefile
==============================================================================
--- head/biology/viennarna/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/biology/viennarna/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -2,7 +2,7 @@
PORTNAME= viennarna
DISTVERSION= 2.4.13
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= biology
MASTER_SITES= https://www.tbi.univie.ac.at/RNA/download/sourcecode/2_4_x/
DISTNAME= ViennaRNA-${DISTVERSION}
Modified: head/comms/gnuradio/Makefile
==============================================================================
--- head/comms/gnuradio/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/comms/gnuradio/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -2,7 +2,7 @@
PORTNAME= gnuradio
PORTVERSION= 3.8.0.0
-PORTREVISION= 2
+PORTREVISION= 3
CATEGORIES= comms astro hamradio
MASTER_SITES= http://gnuradio.org/releases/gnuradio/
Modified: head/editors/calligra/Makefile
==============================================================================
--- head/editors/calligra/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/editors/calligra/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -2,7 +2,7 @@
PORTNAME= calligra
DISTVERSION= 3.1.0
-PORTREVISION= 25
+PORTREVISION= 26
CATEGORIES= editors kde
MASTER_SITES= KDE/stable/${PORTNAME}/${PORTVERSION}
DIST_SUBDIR= KDE/${PORTNAME}
Modified: head/graphics/enblend/Makefile
==============================================================================
--- head/graphics/enblend/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/graphics/enblend/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -3,7 +3,7 @@
PORTNAME= enblend
PORTVERSION= 4.2
-PORTREVISION= 3
+PORTREVISION= 4
CATEGORIES= graphics
MASTER_SITES= SF/enblend/enblend-enfuse/enblend-enfuse-${PORTVERSION}
DISTNAME= enblend-enfuse-${PORTVERSION}
Modified: head/graphics/inkscape/Makefile
==============================================================================
--- head/graphics/inkscape/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/graphics/inkscape/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -3,7 +3,7 @@
PORTNAME= inkscape
PORTVERSION= 0.92.4
-PORTREVISION= 9
+PORTREVISION= 10
CATEGORIES= graphics gnome
MASTER_SITES= https://media.inkscape.org/dl/resources/file/
Modified: head/graphics/krita/Makefile
==============================================================================
--- head/graphics/krita/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/graphics/krita/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -2,7 +2,7 @@
PORTNAME= krita
DISTVERSION= 4.2.6
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= graphics kde
MASTER_SITES= KDE/stable/${PORTNAME}/${DISTVERSION}
DIST_SUBDIR= KDE/${PORTNAME}
Modified: head/graphics/luminance-qt5/Makefile
==============================================================================
--- head/graphics/luminance-qt5/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/graphics/luminance-qt5/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -3,7 +3,7 @@
PORTNAME= luminance-hdr
DISTVERSION= 2.5.1
-PORTREVISION= 3
+PORTREVISION= 4
CATEGORIES= graphics
MASTER_SITES= SF/qtpfsgui/luminance/${DISTVERSION}
PKGNAMESUFFIX= -qt5
Modified: head/graphics/mandelbulber/Makefile
==============================================================================
--- head/graphics/mandelbulber/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/graphics/mandelbulber/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -3,7 +3,7 @@
PORTNAME= mandelbulber
DISTVERSION= 2.19
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= graphics
MAINTAINER= amdmi3 at FreeBSD.org
Modified: head/graphics/nip2/Makefile
==============================================================================
--- head/graphics/nip2/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/graphics/nip2/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -3,7 +3,7 @@
PORTNAME= nip2
PORTVERSION= 8.7.1
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= graphics
MASTER_SITES= https://github.com/libvips/${PORTNAME}/releases/download/v${PORTVERSION}/
Modified: head/graphics/pfstools/Makefile
==============================================================================
--- head/graphics/pfstools/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/graphics/pfstools/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -3,7 +3,7 @@
PORTNAME= pfstools
DISTVERSION= 2.1.0
-PORTREVISION= 5
+PORTREVISION= 6
CATEGORIES= graphics
MASTER_SITES= SF
Modified: head/graphics/qgis-ltr/Makefile
==============================================================================
--- head/graphics/qgis-ltr/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/graphics/qgis-ltr/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -4,7 +4,7 @@
PORTNAME= qgis
DISTVERSIONPREFIX= final-
DISTVERSION= 3_4_11
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= graphics geography
PKGNAMESUFFIX= -ltr
Modified: head/graphics/qgis/Makefile
==============================================================================
--- head/graphics/qgis/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/graphics/qgis/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -4,6 +4,7 @@
PORTNAME= qgis
DISTVERSIONPREFIX= final-
DISTVERSION= 3_8_2
+PORTREVISION= 1
CATEGORIES= graphics geography
MAINTAINER= rhurlin at gwdg.de
Modified: head/graphics/xaos/Makefile
==============================================================================
--- head/graphics/xaos/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/graphics/xaos/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -3,7 +3,7 @@
PORTNAME= xaos
PORTVERSION= 3.6
-PORTREVISION= 6
+PORTREVISION= 7
CATEGORIES= graphics math
MASTER_SITES= SF/${PORTNAME}/XaoS/${PORTVERSION}
Modified: head/lang/algol68g/Makefile
==============================================================================
--- head/lang/algol68g/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/lang/algol68g/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -2,7 +2,7 @@
PORTNAME= algol68g
PORTVERSION= 2.8.4
-PORTREVISION= 7
+PORTREVISION= 8
CATEGORIES= lang
MASTER_SITES= http://jmvdveer.home.xs4all.nl/
Modified: head/mail/bogofilter-kc/Makefile
==============================================================================
--- head/mail/bogofilter-kc/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/mail/bogofilter-kc/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -1,7 +1,7 @@
# $FreeBSD$
PORTNAME= bogofilter
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= mail
PKGNAMESUFFIX= -kc
Modified: head/mail/bogofilter-lmdb/Makefile
==============================================================================
--- head/mail/bogofilter-lmdb/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/mail/bogofilter-lmdb/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -1,7 +1,7 @@
# $FreeBSD$
PORTNAME= bogofilter
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= mail
PKGNAMESUFFIX= -lmdb
Modified: head/mail/bogofilter-sqlite/Makefile
==============================================================================
--- head/mail/bogofilter-sqlite/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/mail/bogofilter-sqlite/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -2,7 +2,7 @@
# $FreeBSD$
PORTNAME= bogofilter
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= mail
PKGNAMESUFFIX= -sqlite
Modified: head/mail/bogofilter-tc/Makefile
==============================================================================
--- head/mail/bogofilter-tc/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/mail/bogofilter-tc/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -2,7 +2,7 @@
# $FreeBSD$
PORTNAME= bogofilter
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= mail
PKGNAMESUFFIX= -tc
Modified: head/mail/bogofilter/Makefile
==============================================================================
--- head/mail/bogofilter/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/mail/bogofilter/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -3,7 +3,7 @@
PORTNAME= bogofilter
DISTVERSION= 1.2.5
-PORTREVISION?= 0
+PORTREVISION?= 1
CATEGORIES?= mail
MASTER_SITES= SF/bogofilter/bogofilter-stable/
Modified: head/math/asymptote/Makefile
==============================================================================
--- head/math/asymptote/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/math/asymptote/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -3,7 +3,7 @@
PORTNAME= asymptote
PORTVERSION= 2.56
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= math
MASTER_SITES= SF/${PORTNAME}/${PORTVERSION}
DISTNAME= ${PORTNAME}-${PORTVERSION}.src
Modified: head/math/deal.ii/Makefile
==============================================================================
--- head/math/deal.ii/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/math/deal.ii/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -3,7 +3,7 @@
PORTNAME= deal.II
DISTVERSIONPREFIX= v
DISTVERSION= 9.1.1
-PORTREVISION= 3
+PORTREVISION= 4
CATEGORIES= math
MAINTAINER= yuri at FreeBSD.org
Modified: head/math/dieharder/Makefile
==============================================================================
--- head/math/dieharder/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/math/dieharder/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -3,7 +3,7 @@
PORTNAME= dieharder
PORTVERSION= 3.31.1
-PORTREVISION= 6
+PORTREVISION= 7
CATEGORIES= math
MASTER_SITES= http://www.phy.duke.edu/~rgb/General/dieharder/ LOCAL/bf
Modified: head/math/fflas-ffpack/Makefile
==============================================================================
--- head/math/fflas-ffpack/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/math/fflas-ffpack/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -3,7 +3,7 @@
PORTNAME= fflas-ffpack
PORTVERSION= 1.4.3
-PORTREVISION= 16
+PORTREVISION= 17
CATEGORIES= math
MASTER_SITES= http://linalg.org/ LOCAL/bf
Modified: head/math/giacxcas/Makefile
==============================================================================
--- head/math/giacxcas/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/math/giacxcas/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -3,6 +3,7 @@
PORTNAME= giacxcas
DISTVERSION= 1.5.0-67
+PORTREVISION= 1
CATEGORIES= math
MASTER_SITES= http://www-fourier.ujf-grenoble.fr/~parisse/debian/dists/stable/main/source/:giac \
http://www-fourier.ujf-grenoble.fr/~parisse/giac/freebsd/
Modified: head/math/gsl/Makefile
==============================================================================
--- head/math/gsl/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/math/gsl/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -2,8 +2,7 @@
# $FreeBSD$
PORTNAME= gsl
-PORTVERSION= 2.5
-PORTREVISION= 1
+PORTVERSION= 2.6
CATEGORIES= math
MASTER_SITES= GNU
Modified: head/math/gsl/distinfo
==============================================================================
--- head/math/gsl/distinfo Fri Oct 25 23:37:31 2019 (r515670)
+++ head/math/gsl/distinfo Fri Oct 25 23:41:34 2019 (r515671)
@@ -1,3 +1,3 @@
-TIMESTAMP = 1529158403
-SHA256 (gsl-2.5.tar.gz) = 0460ad7c2542caaddc6729762952d345374784100223995eb14d614861f2258d
-SIZE (gsl-2.5.tar.gz) = 7303881
+TIMESTAMP = 1566551853
+SHA256 (gsl-2.6.tar.gz) = b782339fc7a38fe17689cb39966c4d821236c28018b6593ddb6fd59ee40786a8
+SIZE (gsl-2.6.tar.gz) = 7398548
Modified: head/math/gsl/pkg-plist
==============================================================================
--- head/math/gsl/pkg-plist Fri Oct 25 23:37:31 2019 (r515670)
+++ head/math/gsl/pkg-plist Fri Oct 25 23:41:34 2019 (r515671)
@@ -19,6 +19,10 @@ include/gsl/gsl_block_uint.h
include/gsl/gsl_block_ulong.h
include/gsl/gsl_block_ushort.h
include/gsl/gsl_bspline.h
+include/gsl/gsl_bst.h
+include/gsl/gsl_bst_avl.h
+include/gsl/gsl_bst_rb.h
+include/gsl/gsl_bst_types.h
include/gsl/gsl_cblas.h
include/gsl/gsl_cdf.h
include/gsl/gsl_chebyshev.h
@@ -213,6 +217,20 @@ include/gsl/gsl_splinalg.h
include/gsl/gsl_spline.h
include/gsl/gsl_spline2d.h
include/gsl/gsl_spmatrix.h
+include/gsl/gsl_spmatrix_char.h
+include/gsl/gsl_spmatrix_complex_double.h
+include/gsl/gsl_spmatrix_complex_float.h
+include/gsl/gsl_spmatrix_complex_long_double.h
+include/gsl/gsl_spmatrix_double.h
+include/gsl/gsl_spmatrix_float.h
+include/gsl/gsl_spmatrix_int.h
+include/gsl/gsl_spmatrix_long.h
+include/gsl/gsl_spmatrix_long_double.h
+include/gsl/gsl_spmatrix_short.h
+include/gsl/gsl_spmatrix_uchar.h
+include/gsl/gsl_spmatrix_uint.h
+include/gsl/gsl_spmatrix_ulong.h
+include/gsl/gsl_spmatrix_ushort.h
include/gsl/gsl_statistics.h
include/gsl/gsl_statistics_char.h
include/gsl/gsl_statistics_double.h
@@ -250,8 +268,8 @@ include/gsl/gsl_wavelet.h
include/gsl/gsl_wavelet2d.h
lib/libgsl.a
lib/libgsl.so
-lib/libgsl.so.23
-lib/libgsl.so.23.1.0
+lib/libgsl.so.25
+lib/libgsl.so.25.0.0
lib/libgslcblas.a
lib/libgslcblas.so
lib/libgslcblas.so.0
Modified: head/math/labplot/Makefile
==============================================================================
--- head/math/labplot/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/math/labplot/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -3,6 +3,7 @@
PORTNAME= labplot
PORTVERSION= 2.7.0
+PORTREVISION= 1
CATEGORIES= math kde
MASTER_SITES= KDE/stable/${PORTNAME}/${PORTVERSION}
Modified: head/math/mandelbulber2/Makefile
==============================================================================
--- head/math/mandelbulber2/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/math/mandelbulber2/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -2,7 +2,7 @@
PORTNAME= mandelbulber2
DISTVERSION= 2.19
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= math
MAINTAINER= yuri at FreeBSD.org
Modified: head/math/mathgl/Makefile
==============================================================================
--- head/math/mathgl/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/math/mathgl/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -2,6 +2,7 @@
PORTNAME= mathgl
DISTVERSION= 2.4.4
+PORTREVISION= 1
CATEGORIES= math graphics
MASTER_SITES= SF/${PORTNAME}/${PORTNAME}/${PORTNAME}%20${PORTVERSION}/
Modified: head/math/mcsim/Makefile
==============================================================================
--- head/math/mcsim/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/math/mcsim/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -3,6 +3,7 @@
PORTNAME= mcsim
PORTVERSION= 6.1.0
+PORTREVISION= 1
CATEGORIES= math
MASTER_SITES= GNU
Modified: head/math/ocamlgsl/Makefile
==============================================================================
--- head/math/ocamlgsl/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/math/ocamlgsl/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -4,7 +4,7 @@
PORTNAME= ocaml-gsl
DISTVERSIONPREFIX=v
DISTVERSION= 1.19.1
-PORTREVISION= 3
+PORTREVISION= 4
CATEGORIES= math
MAINTAINER= michipili at gmail.com
Modified: head/math/octave-forge-gsl/Makefile
==============================================================================
--- head/math/octave-forge-gsl/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/math/octave-forge-gsl/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -3,7 +3,7 @@
PORTNAME= octave-forge-gsl
PORTVERSION= 2.1.1
-PORTREVISION= 6
+PORTREVISION= 7
CATEGORIES= math
MAINTAINER= stephen at FreeBSD.org
Modified: head/math/orpie/Makefile
==============================================================================
--- head/math/orpie/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/math/orpie/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -3,7 +3,7 @@
PORTNAME= orpie
PORTVERSION= 1.5.2
-PORTREVISION= 4
+PORTREVISION= 5
CATEGORIES+= math
MASTER_SITES= GENTOO http://pessimization.com/software/orpie/
Modified: head/math/p5-Algorithm-KMeans/Makefile
==============================================================================
--- head/math/p5-Algorithm-KMeans/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/math/p5-Algorithm-KMeans/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -2,6 +2,7 @@
PORTNAME= Algorithm-KMeans
PORTVERSION= 2.05
+PORTREVISION= 1
CATEGORIES= math perl5
MASTER_SITES= CPAN
MASTER_SITE_SUBDIR= CPAN:AVIKAK
Modified: head/math/p5-Math-GSL/Makefile
==============================================================================
--- head/math/p5-Math-GSL/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/math/p5-Math-GSL/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -3,6 +3,7 @@
PORTNAME= Math-GSL
PORTVERSION= 0.40
+PORTREVISION= 1
CATEGORIES= math perl5
MASTER_SITES= CPAN
PKGNAMEPREFIX= p5-
@@ -22,6 +23,8 @@ TEST_DEPENDS= p5-Test-Class>=0.12:devel/p5-Test-Class
USES= perl5
USE_PERL5= modbuild
+
+BROKEN= Does not work with gsl-2.6
post-install:
${FIND} ${STAGEDIR}${PREFIX}/${SITE_ARCH_REL}/auto/Math/GSL/ -name "*.so" -exec ${STRIP_CMD} {} +
Modified: head/math/pspp/Makefile
==============================================================================
--- head/math/pspp/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/math/pspp/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -3,7 +3,7 @@
PORTNAME= pspp
PORTVERSION= 1.2.0
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= math
MASTER_SITES= GNU
Modified: head/math/py-cvxopt/Makefile
==============================================================================
--- head/math/py-cvxopt/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/math/py-cvxopt/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -2,7 +2,7 @@
PORTNAME= cvxopt
DISTVERSION= 1.2.3
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= math python
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
Modified: head/math/py-pygsl/Makefile
==============================================================================
--- head/math/py-pygsl/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/math/py-pygsl/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -3,7 +3,7 @@
PORTNAME= pygsl
PORTVERSION= 2.3.0
-PORTREVISION= 4
+PORTREVISION= 5
CATEGORIES= math python
MASTER_SITES= SF/${PORTNAME}/${PORTNAME}/${PORTNAME}-${PORTVERSION}
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
Modified: head/math/py-pygslodeiv2/Makefile
==============================================================================
--- head/math/py-pygslodeiv2/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/math/py-pygslodeiv2/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -2,7 +2,7 @@
PORTNAME= pygslodeiv2
DISTVERSION= 0.9.2
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= math python
MASTER_SITES= CHEESESHOP
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
Modified: head/math/rubygem-rb-gsl/Makefile
==============================================================================
--- head/math/rubygem-rb-gsl/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/math/rubygem-rb-gsl/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -3,7 +3,7 @@
PORTNAME= gsl
PORTVERSION= 2.1.0.2
-PORTREVISION= 2
+PORTREVISION= 3
CATEGORIES= math rubygems
MASTER_SITES= RG
PKGNAMEPREFIX= rubygem-rb-
Modified: head/misc/visp/Makefile
==============================================================================
--- head/misc/visp/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/misc/visp/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -2,7 +2,7 @@
PORTNAME= visp
DISTVERSION= 3.2.0
-PORTREVISION= 5
+PORTREVISION= 6
CATEGORIES= misc
MASTER_SITES= http://gforge.inria.fr/frs/download.php/latestfile/475/
Modified: head/science/afni/Makefile
==============================================================================
--- head/science/afni/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/science/afni/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -3,7 +3,7 @@
PORTNAME= afni
DISTVERSIONPREFIX= AFNI_
DISTVERSION= 19.1.20
-PORTREVISION= 3
+PORTREVISION= 4
CATEGORIES= science biology graphics perl5 python
MAINTAINER= jwb at FreeBSD.org
Modified: head/science/antioch/Makefile
==============================================================================
--- head/science/antioch/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/science/antioch/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -4,7 +4,7 @@ PORTNAME= antioch
DISTVERSIONPREFIX= v
DISTVERSION= 0.4.0-156
DISTVERSIONSUFFIX= -g90ffa43
-PORTREVISION= 7
+PORTREVISION= 8
CATEGORIES= science
MAINTAINER= yuri at FreeBSD.org
Modified: head/science/coot/Makefile
==============================================================================
--- head/science/coot/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/science/coot/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -2,7 +2,7 @@
PORTNAME= coot
DISTVERSION= 0.8.9.2
-PORTREVISION= 2
+PORTREVISION= 3
CATEGORIES= science
MASTER_SITES= https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/${PORTNAME}/source/releases/ \
https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/${PORTNAME}/dependencies/:data
Modified: head/science/erkale/Makefile
==============================================================================
--- head/science/erkale/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/science/erkale/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -2,7 +2,7 @@
PORTNAME= erkale
DISTVERSION= g20190812
-PORTREVISION= 2
+PORTREVISION= 3
CATEGORIES= science
MAINTAINER= yuri at FreeBSD.org
Modified: head/science/fisicalab/Makefile
==============================================================================
--- head/science/fisicalab/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/science/fisicalab/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -2,7 +2,7 @@
PORTNAME= fisicalab
PORTVERSION= 0.3.3
-PORTREVISION= 10
+PORTREVISION= 11
CATEGORIES= science gnustep
MASTER_SITES= SAVANNAH
Modified: head/science/getdp/Makefile
==============================================================================
--- head/science/getdp/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/science/getdp/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -3,7 +3,7 @@
PORTNAME= getdp
PORTVERSION= 3.2.0
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= science
MASTER_SITES= http://www.geuz.org/getdp/src/
DISTNAME= ${PORTNAME}-${PORTVERSION}-source
Modified: head/science/gnudatalanguage/Makefile
==============================================================================
--- head/science/gnudatalanguage/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/science/gnudatalanguage/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -4,7 +4,7 @@
PORTNAME= gnudatalanguage
PORTVERSION= 0.9.9
DISTVERSIONPREFIX= v
-PORTREVISION= 10
+PORTREVISION= 11
CATEGORIES= science lang
.if defined(BUILD_PYTHON_MODULE)
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
Modified: head/science/jdftx/Makefile
==============================================================================
--- head/science/jdftx/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/science/jdftx/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -3,6 +3,7 @@
PORTNAME= jdftx
DISTVERSIONPREFIX= v
DISTVERSION= 1.5.0
+PORTREVISION= 1
CATEGORIES= science
MAINTAINER= yuri at FreeBSD.org
Modified: head/science/kst2/Makefile
==============================================================================
--- head/science/kst2/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/science/kst2/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -3,7 +3,7 @@
PORTNAME= kst
DISTVERSION= ${KST_VERSION}.${KST_DATE}
-PORTREVISION= 2
+PORTREVISION= 3
CATEGORIES= science
MAINTAINER= makc at FreeBSD.org
Modified: head/science/meep/Makefile
==============================================================================
--- head/science/meep/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/science/meep/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -3,7 +3,7 @@
PORTNAME= meep
PORTVERSION= 1.2.1
-PORTREVISION= 19
+PORTREVISION= 20
CATEGORIES= science
MASTER_SITES= http://ab-initio.mit.edu/meep/
Modified: head/science/nest/Makefile
==============================================================================
--- head/science/nest/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/science/nest/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -3,7 +3,7 @@
PORTNAME= nest
DISTVERSIONPREFIX= v
DISTVERSION= 2.18.0
-PORTREVISION= 2
+PORTREVISION= 3
CATEGORIES= science biology # NEST is used in neuroscience
PATCH_SITES= https://github.com/${GH_ACCOUNT}/${GH_PROJECT}/commit/
Modified: head/science/octopus/Makefile
==============================================================================
--- head/science/octopus/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/science/octopus/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -2,7 +2,7 @@
PORTNAME= octopus
DISTVERSION= 8.4
-PORTREVISION= 2
+PORTREVISION= 3
CATEGORIES= science
MASTER_SITES= http://www.tddft.org/programs/${PORTNAME}/download/${DISTVERSION}/
Modified: head/science/py-mlpy/Makefile
==============================================================================
--- head/science/py-mlpy/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/science/py-mlpy/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -3,7 +3,7 @@
PORTNAME= mlpy
PORTVERSION= 3.5.0
-PORTREVISION= 8
+PORTREVISION= 9
CATEGORIES= science python
MASTER_SITES= SF/${PORTNAME}/${PORTNAME}%20${PORTVERSION}
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
Modified: head/science/scidavis/Makefile
==============================================================================
--- head/science/scidavis/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/science/scidavis/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -2,7 +2,7 @@
PORTNAME= scidavis
PORTVERSION= 2.0.1
-PORTREVISION= 2
+PORTREVISION= 3
CATEGORIES= science
MAINTAINER= makc at FreeBSD.org
Modified: head/science/step/Makefile
==============================================================================
--- head/science/step/Makefile Fri Oct 25 23:37:31 2019 (r515670)
+++ head/science/step/Makefile Fri Oct 25 23:41:34 2019 (r515671)
@@ -2,6 +2,7 @@
PORTNAME= step
DISTVERSION= ${KDE_APPLICATIONS_VERSION}
+PORTREVISION= 1
CATEGORIES= science kde kde-applications
MAINTAINER= kde at FreeBSD.org
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