svn commit: r494554 - head/biology/bedtools
Jan Beich
jbeich at FreeBSD.org
Mon Mar 4 06:55:09 UTC 2019
Author: jbeich
Date: Mon Mar 4 06:55:08 2019
New Revision: 494554
URL: https://svnweb.freebsd.org/changeset/ports/494554
Log:
biology/bedtools: unbreak with libc++ 8
In file included from FileReader.cpp:1:
In file included from /usr/include/c++/v1/iostream:38:
In file included from /usr/include/c++/v1/ios:216:
In file included from /usr/include/c++/v1/__locale:15:
In file included from /usr/include/c++/v1/string:505:
In file included from /usr/include/c++/v1/string_view:176:
In file included from /usr/include/c++/v1/__string:57:
In file included from /usr/include/c++/v1/algorithm:640:
In file included from /usr/include/c++/v1/initializer_list:47:
In file included from /usr/include/c++/v1/cstddef:38:
../../../utils//gzstream/version:1:1: error: expected unqualified-id
1.5 (08 Jan 2003)
^
PR: 236192
Approved by: portmgr blanket
Modified:
head/biology/bedtools/Makefile (contents, props changed)
Modified: head/biology/bedtools/Makefile
==============================================================================
--- head/biology/bedtools/Makefile Mon Mar 4 06:43:06 2019 (r494553)
+++ head/biology/bedtools/Makefile Mon Mar 4 06:55:08 2019 (r494554)
@@ -17,6 +17,11 @@ USE_GITHUB= yes
GH_ACCOUNT= arq5x
GH_PROJECT= bedtools2
+post-extract:
+# Avoid conflict with C++20 <version> by adding .txt suffix
+ @${MV} ${WRKSRC}/src/utils/gzstream/version \
+ ${WRKSRC}/src/utils/gzstream/version.txt
+
pre-build:
@${REINPLACE_CMD} -e 's|python|${PYTHON_CMD}|g' ${WRKSRC}/Makefile
@${REINPLACE_CMD} -e 's|@\$$(CXX)|$$(CXX)|g' \
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