svn commit: r479046 - in head: audio/csound6 biology/kallisto cad/freecad cad/gmsh devel/py-tables graphics/alembic graphics/blender graphics/caffe graphics/opencv graphics/openimageio graphics/vig...

Sunpoet Po-Chuan Hsieh sunpoet at FreeBSD.org
Wed Sep 5 22:05:35 UTC 2018 

Author: sunpoet
Date: Wed Sep  5 22:05:23 2018
New Revision: 479046
URL: https://svnweb.freebsd.org/changeset/ports/479046

Log:
  Update science/hdf5 to 1.10.2
  
  - Bump PORTREVISION of dependent ports for shlib change
  
  Changes:	https://portal.hdfgroup.org/display/support/HDF5%201.10.2#releasenotes
  		https://support.hdfgroup.org/ftp/HDF5/releases/hdf5-1.10/hdf5-1.10.2/src/hdf5-1.10.2-RELEASE.txt
  PR:		231009
  Exp-run by:	antoine

Modified:
  head/audio/csound6/Makefile
  head/biology/kallisto/Makefile
  head/cad/freecad/Makefile
  head/cad/gmsh/Makefile
  head/devel/py-tables/Makefile
  head/graphics/alembic/Makefile
  head/graphics/blender/Makefile
  head/graphics/caffe/Makefile
  head/graphics/opencv/Makefile
  head/graphics/openimageio/Makefile
  head/graphics/vigra/Makefile
  head/graphics/vips/Makefile
  head/math/ambit/Makefile
  head/math/armadillo/Makefile
  head/math/dynare/Makefile
  head/math/flann/Makefile
  head/math/labplot/Makefile
  head/math/libmesh/Makefile
  head/math/mathgl/Makefile
  head/math/matio/Makefile
  head/math/octave/Makefile
  head/math/pdal/Makefile
  head/math/scilab/Makefile
  head/science/ALPSCore/Makefile
  head/science/InsightToolkit/Makefile
  head/science/MOOSE-neural-simulator/Makefile
  head/science/cdo/Makefile
  head/science/cgnslib/Makefile
  head/science/chemps2/Makefile
  head/science/chrono/Makefile
  head/science/dft_tools/Makefile
  head/science/ecs/Makefile
  head/science/fvm/Makefile
  head/science/gnudatalanguage/Makefile
  head/science/h5utils/Makefile
  head/science/hdf5/Makefile
  head/science/hdf5/distinfo
  head/science/hdf5/pkg-plist
  head/science/meep/Makefile
  head/science/minc2/Makefile
  head/science/mpb/Makefile
  head/science/ncs/Makefile
  head/science/netcdf/Makefile
  head/science/paraview/Makefile
  head/science/py-h5py/Makefile
  head/science/py-netCDF4/Makefile
  head/science/qmcpack/Makefile
  head/science/rmf/Makefile
  head/science/silo/Makefile
  head/science/triqs/Makefile

Modified: head/audio/csound6/Makefile
==============================================================================
--- head/audio/csound6/Makefile	Wed Sep  5 22:01:55 2018	(r479045)
+++ head/audio/csound6/Makefile	Wed Sep  5 22:05:23 2018	(r479046)
@@ -3,7 +3,7 @@
 
 PORTNAME=	csound
 PORTVERSION=	6.06
-PORTREVISION=	18
+PORTREVISION=	19
 CATEGORIES=	audio lang
 MASTER_SITES=	SF/${PORTNAME}/${PORTNAME}6/${PORTNAME:S/c/C/}${PORTVERSION}
 PKGNAMESUFFIX=	6

Modified: head/biology/kallisto/Makefile
==============================================================================
--- head/biology/kallisto/Makefile	Wed Sep  5 22:01:55 2018	(r479045)
+++ head/biology/kallisto/Makefile	Wed Sep  5 22:05:23 2018	(r479046)
@@ -3,7 +3,7 @@
 PORTNAME=	kallisto
 DISTVERSIONPREFIX=	v
 DISTVERSION=	0.43.1
-PORTREVISION=	1
+PORTREVISION=	2
 CATEGORIES=	biology
 
 MAINTAINER=	jwb at FreeBSD.org

Modified: head/cad/freecad/Makefile
==============================================================================
--- head/cad/freecad/Makefile	Wed Sep  5 22:01:55 2018	(r479045)
+++ head/cad/freecad/Makefile	Wed Sep  5 22:05:23 2018	(r479046)
@@ -2,7 +2,7 @@
 
 PORTNAME=	FreeCAD
 DISTVERSION=	0.17.13509
-PORTREVISION=	2
+PORTREVISION=	3
 CATEGORIES=	cad
 
 MAINTAINER=	ports at FreeBSD.org

Modified: head/cad/gmsh/Makefile
==============================================================================
--- head/cad/gmsh/Makefile	Wed Sep  5 22:01:55 2018	(r479045)
+++ head/cad/gmsh/Makefile	Wed Sep  5 22:05:23 2018	(r479046)
@@ -3,7 +3,7 @@
 
 PORTNAME=	gmsh
 DISTVERSION=	3.0.6
-PORTREVISION=	2
+PORTREVISION=	3
 CATEGORIES=	cad
 MASTER_SITES=	http://gmsh.info/src/
 DISTNAME=	${PORTNAME}-${PORTVERSION}-source

Modified: head/devel/py-tables/Makefile
==============================================================================
--- head/devel/py-tables/Makefile	Wed Sep  5 22:01:55 2018	(r479045)
+++ head/devel/py-tables/Makefile	Wed Sep  5 22:05:23 2018	(r479046)
@@ -3,7 +3,7 @@
 
 PORTNAME=	tables
 PORTVERSION=	3.4.4
-PORTREVISION=	1
+PORTREVISION=	2
 CATEGORIES=	devel python
 MASTER_SITES=	CHEESESHOP
 PKGNAMEPREFIX=	${PYTHON_PKGNAMEPREFIX}

Modified: head/graphics/alembic/Makefile
==============================================================================
--- head/graphics/alembic/Makefile	Wed Sep  5 22:01:55 2018	(r479045)
+++ head/graphics/alembic/Makefile	Wed Sep  5 22:05:23 2018	(r479046)
@@ -3,7 +3,7 @@
 
 PORTNAME=	alembic
 PORTVERSION=	1.7.8
-PORTREVISION=	1
+PORTREVISION=	2
 CATEGORIES=	graphics
 
 MAINTAINER=	danfe at FreeBSD.org

Modified: head/graphics/blender/Makefile
==============================================================================
--- head/graphics/blender/Makefile	Wed Sep  5 22:01:55 2018	(r479045)
+++ head/graphics/blender/Makefile	Wed Sep  5 22:05:23 2018	(r479046)
@@ -3,7 +3,7 @@
 
 PORTNAME=	blender
 PORTVERSION=	2.79b
-PORTREVISION=	3
+PORTREVISION=	4
 CATEGORIES=	graphics games
 MASTER_SITES=	http://download.blender.org/source/ \
 		http://mirror.cs.umn.edu/blender.org/source/ \

Modified: head/graphics/caffe/Makefile
==============================================================================
--- head/graphics/caffe/Makefile	Wed Sep  5 22:01:55 2018	(r479045)
+++ head/graphics/caffe/Makefile	Wed Sep  5 22:05:23 2018	(r479046)
@@ -2,7 +2,7 @@
 
 PORTNAME=	caffe
 PORTVERSION=	1.0
-PORTREVISION=	14
+PORTREVISION=	15
 CATEGORIES=	graphics
 
 MAINTAINER=	eric at camachat.org

Modified: head/graphics/opencv/Makefile
==============================================================================
--- head/graphics/opencv/Makefile	Wed Sep  5 22:01:55 2018	(r479045)
+++ head/graphics/opencv/Makefile	Wed Sep  5 22:05:23 2018	(r479046)
@@ -3,7 +3,7 @@
 
 PORTNAME=	opencv
 PORTVERSION=	3.4.1
-PORTREVISION=	3
+PORTREVISION=	4
 CATEGORIES=	graphics
 
 MAINTAINER=	ports at FreeBSD.org

Modified: head/graphics/openimageio/Makefile
==============================================================================
--- head/graphics/openimageio/Makefile	Wed Sep  5 22:01:55 2018	(r479045)
+++ head/graphics/openimageio/Makefile	Wed Sep  5 22:05:23 2018	(r479046)
@@ -4,7 +4,7 @@
 PORTNAME=	openimageio
 PORTVERSION=	1.7.17
 DISTVERSIONPREFIX=	Release-
-PORTREVISION=	12
+PORTREVISION=	13
 CATEGORIES?=	graphics multimedia
 
 MAINTAINER?=	FreeBSD at Shaneware.biz

Modified: head/graphics/vigra/Makefile
==============================================================================
--- head/graphics/vigra/Makefile	Wed Sep  5 22:01:55 2018	(r479045)
+++ head/graphics/vigra/Makefile	Wed Sep  5 22:05:23 2018	(r479046)
@@ -3,7 +3,7 @@
 
 PORTNAME=	vigra
 DISTVERSION=	1.11.0
-PORTREVISION=	22
+PORTREVISION=	23
 CATEGORIES=	graphics
 
 PATCH_SITES=	https://github.com/${GH_ACCOUNT}/${GH_PROJECT}/commit/

Modified: head/graphics/vips/Makefile
==============================================================================
--- head/graphics/vips/Makefile	Wed Sep  5 22:01:55 2018	(r479045)
+++ head/graphics/vips/Makefile	Wed Sep  5 22:05:23 2018	(r479046)
@@ -3,7 +3,7 @@
 
 PORTNAME=	vips
 PORTVERSION=	8.6.5
-PORTREVISION=	1
+PORTREVISION=	2
 CATEGORIES=	graphics
 MASTER_SITES=	https://github.com/${GH_ACCOUNT}/libvips/releases/download/v${PORTVERSION}/
 

Modified: head/math/ambit/Makefile
==============================================================================
--- head/math/ambit/Makefile	Wed Sep  5 22:01:55 2018	(r479045)
+++ head/math/ambit/Makefile	Wed Sep  5 22:05:23 2018	(r479046)
@@ -4,7 +4,7 @@ PORTNAME=	ambit
 DISTVERSIONPREFIX=	v
 DISTVERSION=	0.2-37
 DISTVERSIONSUFFIX=	-g9c7049a
-PORTREVISION=	3
+PORTREVISION=	4
 CATEGORIES=	math
 PKGNAMESUFFIX=	-tensor # avoid clash with shells/ambit
 

Modified: head/math/armadillo/Makefile
==============================================================================
--- head/math/armadillo/Makefile	Wed Sep  5 22:01:55 2018	(r479045)
+++ head/math/armadillo/Makefile	Wed Sep  5 22:05:23 2018	(r479046)
@@ -2,6 +2,7 @@
 
 PORTNAME=	armadillo
 PORTVERSION=	9.100.5
+PORTREVISION=	1
 CATEGORIES=	math
 MASTER_SITES=	SF/arma
 

Modified: head/math/dynare/Makefile
==============================================================================
--- head/math/dynare/Makefile	Wed Sep  5 22:01:55 2018	(r479045)
+++ head/math/dynare/Makefile	Wed Sep  5 22:05:23 2018	(r479046)
@@ -2,6 +2,7 @@
 
 PORTNAME=	dynare
 DISTVERSION=	4.5.6
+PORTREVISION=	1
 CATEGORIES=	math
 MASTER_SITES=	http://www.dynare.org/release/source/
 

Modified: head/math/flann/Makefile
==============================================================================
--- head/math/flann/Makefile	Wed Sep  5 22:01:55 2018	(r479045)
+++ head/math/flann/Makefile	Wed Sep  5 22:05:23 2018	(r479046)
@@ -2,6 +2,7 @@
 
 PORTNAME=	flann
 DISTVERSION=	1.9.1-19
+PORTREVISION=	1
 DISTVERSIONSUFFIX=	-gf3a17cd
 CATEGORIES=	math
 

Modified: head/math/labplot/Makefile
==============================================================================
--- head/math/labplot/Makefile	Wed Sep  5 22:01:55 2018	(r479045)
+++ head/math/labplot/Makefile	Wed Sep  5 22:05:23 2018	(r479046)
@@ -3,6 +3,7 @@
 
 PORTNAME=	labplot
 PORTVERSION=	2.5.0
+PORTREVISION=	1
 CATEGORIES=	math kde
 MASTER_SITES=	KDE/stable/${PORTNAME}/${PORTVERSION}
 

Modified: head/math/libmesh/Makefile
==============================================================================
--- head/math/libmesh/Makefile	Wed Sep  5 22:01:55 2018	(r479045)
+++ head/math/libmesh/Makefile	Wed Sep  5 22:05:23 2018	(r479046)
@@ -4,7 +4,7 @@
 PORTNAME=	libmesh
 DISTVERSIONPREFIX=	v
 DISTVERSION=	1.3.0
-PORTREVISION=	2
+PORTREVISION=	3
 CATEGORIES=	math
 
 MAINTAINER=	yuri at FreeBSD.org

Modified: head/math/mathgl/Makefile
==============================================================================
--- head/math/mathgl/Makefile	Wed Sep  5 22:01:55 2018	(r479045)
+++ head/math/mathgl/Makefile	Wed Sep  5 22:05:23 2018	(r479046)
@@ -2,7 +2,7 @@
 
 PORTNAME=	mathgl
 DISTVERSION=	2.4.2.1
-PORTREVISION=	1
+PORTREVISION=	2
 CATEGORIES=	math graphics
 MASTER_SITES=	SF/${PORTNAME}/${PORTNAME}/${PORTNAME}%20${PORTVERSION:R}
 

Modified: head/math/matio/Makefile
==============================================================================
--- head/math/matio/Makefile	Wed Sep  5 22:01:55 2018	(r479045)
+++ head/math/matio/Makefile	Wed Sep  5 22:05:23 2018	(r479046)
@@ -3,7 +3,7 @@
 
 PORTNAME=	matio
 PORTVERSION=	1.5.9
-PORTREVISION=	1
+PORTREVISION=	2
 CATEGORIES=	math
 MASTER_SITES=	SF
 

Modified: head/math/octave/Makefile
==============================================================================
--- head/math/octave/Makefile	Wed Sep  5 22:01:55 2018	(r479045)
+++ head/math/octave/Makefile	Wed Sep  5 22:05:23 2018	(r479046)
@@ -3,6 +3,7 @@
 
 PORTNAME=	octave
 PORTVERSION=	${OCTAVE_VERSION}
+PORTREVISION=	1
 CATEGORIES=	math java
 MASTER_SITES=	GNU
 

Modified: head/math/pdal/Makefile
==============================================================================
--- head/math/pdal/Makefile	Wed Sep  5 22:01:55 2018	(r479045)
+++ head/math/pdal/Makefile	Wed Sep  5 22:05:23 2018	(r479046)
@@ -3,7 +3,7 @@
 
 PORTNAME=	pdal
 DISTVERSION=	1.7.2
-PORTREVISION=	2
+PORTREVISION=	3
 CATEGORIES=	math databases graphics
 
 MAINTAINER=	lbartoletti at tuxfamily.org

Modified: head/math/scilab/Makefile
==============================================================================
--- head/math/scilab/Makefile	Wed Sep  5 22:01:55 2018	(r479045)
+++ head/math/scilab/Makefile	Wed Sep  5 22:05:23 2018	(r479046)
@@ -3,7 +3,7 @@
 
 PORTNAME=	scilab
 PORTVERSION=	5.5.2
-PORTREVISION=	12
+PORTREVISION=	13
 CATEGORIES=	math cad java
 MASTER_SITES=	http://www.scilab.org/download/${PORTVERSION}/
 DISTFILES=	${DISTNAME}-src${EXTRACT_SUFX}

Modified: head/science/ALPSCore/Makefile
==============================================================================
--- head/science/ALPSCore/Makefile	Wed Sep  5 22:01:55 2018	(r479045)
+++ head/science/ALPSCore/Makefile	Wed Sep  5 22:05:23 2018	(r479046)
@@ -3,7 +3,7 @@
 PORTNAME=	ALPSCore
 DISTVERSIONPREFIX=	v
 DISTVERSION=	2.2.0
-PORTREVISION=	1
+PORTREVISION=	2
 CATEGORIES=	science
 
 MAINTAINER=	mike.d.ft402 at gmail.com

Modified: head/science/InsightToolkit/Makefile
==============================================================================
--- head/science/InsightToolkit/Makefile	Wed Sep  5 22:01:55 2018	(r479045)
+++ head/science/InsightToolkit/Makefile	Wed Sep  5 22:05:23 2018	(r479046)
@@ -3,7 +3,7 @@
 
 PORTNAME=	InsightToolkit
 PORTVERSION=	4.13.0
-PORTREVISION=	2
+PORTREVISION=	3
 CATEGORIES=	science biology
 MASTER_SITES=	SF/itk/itk/${ITK_VER}
 

Modified: head/science/MOOSE-neural-simulator/Makefile
==============================================================================
--- head/science/MOOSE-neural-simulator/Makefile	Wed Sep  5 22:01:55 2018	(r479045)
+++ head/science/MOOSE-neural-simulator/Makefile	Wed Sep  5 22:05:23 2018	(r479046)
@@ -3,7 +3,7 @@
 
 PORTNAME=	MOOSE-neural-simulator
 DISTVERSION=	3.1.2
-PORTREVISION=	3
+PORTREVISION=	4
 DISTVERSIONSUFFIX=	-382-gc93d23a
 CATEGORIES=	science biology
 

Modified: head/science/cdo/Makefile
==============================================================================
--- head/science/cdo/Makefile	Wed Sep  5 22:01:55 2018	(r479045)
+++ head/science/cdo/Makefile	Wed Sep  5 22:05:23 2018	(r479046)
@@ -3,6 +3,7 @@
 
 PORTNAME=	cdo
 PORTVERSION=	1.9.5
+PORTREVISION=	1
 CATEGORIES=	science
 MASTER_SITES=	https://code.mpimet.mpg.de/attachments/download/18264/ \
 		LOCAL/sunpoet

Modified: head/science/cgnslib/Makefile
==============================================================================
--- head/science/cgnslib/Makefile	Wed Sep  5 22:01:55 2018	(r479045)
+++ head/science/cgnslib/Makefile	Wed Sep  5 22:05:23 2018	(r479046)
@@ -3,7 +3,7 @@
 
 PORTNAME=	cgnslib
 DISTVERSION=	3.2.1
-PORTREVISION=	12
+PORTREVISION=	13
 PORTEPOCH=	1
 CATEGORIES=	science
 MASTER_SITES=	SF/cgns/${PORTNAME}_${PORTVERSION:R}/

Modified: head/science/chemps2/Makefile
==============================================================================
--- head/science/chemps2/Makefile	Wed Sep  5 22:01:55 2018	(r479045)
+++ head/science/chemps2/Makefile	Wed Sep  5 22:05:23 2018	(r479046)
@@ -3,7 +3,7 @@
 PORTNAME=	CheMPS2
 DISTVERSIONPREFIX=	v
 DISTVERSION=	1.8.7
-PORTREVISION=	1
+PORTREVISION=	2
 CATEGORIES=	science
 
 MAINTAINER=	yuri at FreeBSD.org

Modified: head/science/chrono/Makefile
==============================================================================
--- head/science/chrono/Makefile	Wed Sep  5 22:01:55 2018	(r479045)
+++ head/science/chrono/Makefile	Wed Sep  5 22:05:23 2018	(r479046)
@@ -3,6 +3,7 @@
 PORTNAME=	chrono
 DISTVERSION=	2.0.0-9070
 DISTVERSIONSUFFIX=	-g57a828dc0
+PORTREVISION=	1
 CATEGORIES=	science devel
 
 MAINTAINER=	yuri at FreeBSD.org

Modified: head/science/dft_tools/Makefile
==============================================================================
--- head/science/dft_tools/Makefile	Wed Sep  5 22:01:55 2018	(r479045)
+++ head/science/dft_tools/Makefile	Wed Sep  5 22:05:23 2018	(r479046)
@@ -2,7 +2,7 @@
 
 PORTNAME=	dft_tools
 DISTVERSION=	1.5
-PORTREVISION=	2
+PORTREVISION=	3
 CATEGORIES=	science
 
 MAINTAINER=	yuri at FreeBSD.org

Modified: head/science/ecs/Makefile
==============================================================================
--- head/science/ecs/Makefile	Wed Sep  5 22:01:55 2018	(r479045)
+++ head/science/ecs/Makefile	Wed Sep  5 22:05:23 2018	(r479046)
@@ -3,7 +3,7 @@
 
 PORTNAME=	ecs
 PORTVERSION=	2.0.4
-PORTREVISION=	5
+PORTREVISION=	6
 CATEGORIES=	science
 MASTER_SITES=	http://code-saturne.org/releases/
 

Modified: head/science/fvm/Makefile
==============================================================================
--- head/science/fvm/Makefile	Wed Sep  5 22:01:55 2018	(r479045)
+++ head/science/fvm/Makefile	Wed Sep  5 22:05:23 2018	(r479046)
@@ -3,7 +3,7 @@
 
 PORTNAME=	fvm
 PORTVERSION=	0.15.5
-PORTREVISION=	8
+PORTREVISION=	9
 CATEGORIES=	science parallel
 MASTER_SITES=	http://code-saturne.org/releases/
 

Modified: head/science/gnudatalanguage/Makefile
==============================================================================
--- head/science/gnudatalanguage/Makefile	Wed Sep  5 22:01:55 2018	(r479045)
+++ head/science/gnudatalanguage/Makefile	Wed Sep  5 22:05:23 2018	(r479046)
@@ -3,7 +3,7 @@
 
 PORTNAME=	gnudatalanguage
 DISTVERSION=	0.9.8
-PORTREVISION=	2
+PORTREVISION=	3
 CATEGORIES=	science lang
 MASTER_SITES=	SF/${PORTNAME}/gdl/${PORTVERSION}
 .if defined(BUILD_PYTHON_MODULE)

Modified: head/science/h5utils/Makefile
==============================================================================
--- head/science/h5utils/Makefile	Wed Sep  5 22:01:55 2018	(r479045)
+++ head/science/h5utils/Makefile	Wed Sep  5 22:05:23 2018	(r479046)
@@ -3,7 +3,7 @@
 
 PORTNAME=	h5utils
 DISTVERSION=	1.13.1
-PORTREVISION=	1
+PORTREVISION=	2
 CATEGORIES=	science
 
 MAINTAINER=	aehlig at linta.de

Modified: head/science/hdf5/Makefile
==============================================================================
--- head/science/hdf5/Makefile	Wed Sep  5 22:01:55 2018	(r479045)
+++ head/science/hdf5/Makefile	Wed Sep  5 22:05:23 2018	(r479046)
@@ -2,8 +2,7 @@
 # $FreeBSD$
 
 PORTNAME=	hdf5
-PORTVERSION=	1.10.1
-PORTREVISION=	2
+PORTVERSION=	1.10.2
 CATEGORIES=	science archivers graphics
 MASTER_SITES=	https://support.hdfgroup.org/ftp/HDF5/releases/hdf5-${PORTVERSION:R}/${DISTNAME}/src/ \
 		LOCAL/sunpoet

Modified: head/science/hdf5/distinfo
==============================================================================
--- head/science/hdf5/distinfo	Wed Sep  5 22:01:55 2018	(r479045)
+++ head/science/hdf5/distinfo	Wed Sep  5 22:05:23 2018	(r479046)
@@ -1,3 +1,3 @@
-TIMESTAMP = 1495553545
-SHA256 (hdf5-1.10.1.tar.bz2) = 9c5ce1e33d2463fb1a42dd04daacbc22104e57676e2204e3d66b1ef54b88ebf2
-SIZE (hdf5-1.10.1.tar.bz2) = 11769617
+TIMESTAMP = 1523098063
+SHA256 (hdf5-1.10.2.tar.bz2) = 1cad5b7bfdf128dfc53cd16fba48f6e7ae4e93c75c371d9ec8dfc4df0c1fcb71
+SIZE (hdf5-1.10.2.tar.bz2) = 8609163

Modified: head/science/hdf5/pkg-plist
==============================================================================
--- head/science/hdf5/pkg-plist	Wed Sep  5 22:01:55 2018	(r479045)
+++ head/science/hdf5/pkg-plist	Wed Sep  5 22:05:23 2018	(r479046)
@@ -69,6 +69,7 @@ include/H5Ipublic.h
 include/H5LDpublic.h
 include/H5LTpublic.h
 include/H5LaccProp.h
+include/H5LcreatProp.h
 include/H5Library.h
 include/H5Location.h
 include/H5Lpublic.h
@@ -132,37 +133,28 @@ include/hdf5_hl.h
 %%FORTRAN%%include/tstlite_tests.mod
 %%FORTRAN%%include/tsttable.mod
 %%FORTRAN%%include/tsttable_tests.mod
-lib/libdynlib1.so
-lib/libdynlib2.so
-lib/libdynlib3.so
-lib/libdynlib4.so
-lib/libdynlibadd.so
-lib/libdynlibdiff.so
-lib/libdynlibdump.so
-lib/libdynlibls.so
-lib/libdynlibvers.so
 lib/libhdf5.a
 lib/libhdf5.settings
 lib/libhdf5.so
 lib/libhdf5.so.101
-lib/libhdf5.so.101.0.0
+lib/libhdf5.so.101.1.0
 lib/libhdf5_cpp.a
 lib/libhdf5_cpp.so
-lib/libhdf5_cpp.so.101
-lib/libhdf5_cpp.so.101.0.0
+lib/libhdf5_cpp.so.102
+lib/libhdf5_cpp.so.102.0.0
 %%FORTRAN%%lib/libhdf5_fortran.a
 %%FORTRAN%%lib/libhdf5_fortran.so
 %%FORTRAN%%lib/libhdf5_fortran.so.100
-%%FORTRAN%%lib/libhdf5_fortran.so.100.1.0
+%%FORTRAN%%lib/libhdf5_fortran.so.100.1.1
 lib/libhdf5_hl.a
 lib/libhdf5_hl.so
 lib/libhdf5_hl.so.100
-lib/libhdf5_hl.so.100.0.1
+lib/libhdf5_hl.so.100.1.0
 lib/libhdf5_hl_cpp.a
 lib/libhdf5_hl_cpp.so
 lib/libhdf5_hl_cpp.so.100
-lib/libhdf5_hl_cpp.so.100.1.0
+lib/libhdf5_hl_cpp.so.100.1.1
 %%FORTRAN%%lib/libhdf5hl_fortran.a
 %%FORTRAN%%lib/libhdf5hl_fortran.so
 %%FORTRAN%%lib/libhdf5hl_fortran.so.100
-%%FORTRAN%%lib/libhdf5hl_fortran.so.100.0.1
+%%FORTRAN%%lib/libhdf5hl_fortran.so.100.0.2

Modified: head/science/meep/Makefile
==============================================================================
--- head/science/meep/Makefile	Wed Sep  5 22:01:55 2018	(r479045)
+++ head/science/meep/Makefile	Wed Sep  5 22:05:23 2018	(r479046)
@@ -3,7 +3,7 @@
 
 PORTNAME=	meep
 PORTVERSION=	1.2.1
-PORTREVISION=	14
+PORTREVISION=	15
 CATEGORIES=	science
 MASTER_SITES=	http://ab-initio.mit.edu/meep/
 

Modified: head/science/minc2/Makefile
==============================================================================
--- head/science/minc2/Makefile	Wed Sep  5 22:01:55 2018	(r479045)
+++ head/science/minc2/Makefile	Wed Sep  5 22:05:23 2018	(r479046)
@@ -4,7 +4,7 @@
 PORTNAME=	minc
 PORTVERSION=	2.2.00
 DISTVERSIONPREFIX=	release-
-PORTREVISION=	6
+PORTREVISION=	7
 PORTEPOCH=	1
 CATEGORIES=	science biology
 PKGNAMESUFFIX=	2

Modified: head/science/mpb/Makefile
==============================================================================
--- head/science/mpb/Makefile	Wed Sep  5 22:01:55 2018	(r479045)
+++ head/science/mpb/Makefile	Wed Sep  5 22:05:23 2018	(r479046)
@@ -3,7 +3,7 @@
 
 PORTNAME=	mpb
 PORTVERSION=	1.5
-PORTREVISION=	9
+PORTREVISION=	10
 CATEGORIES=	science
 MASTER_SITES=	http://ab-initio.mit.edu/mpb/
 

Modified: head/science/ncs/Makefile
==============================================================================
--- head/science/ncs/Makefile	Wed Sep  5 22:01:55 2018	(r479045)
+++ head/science/ncs/Makefile	Wed Sep  5 22:05:23 2018	(r479046)
@@ -3,7 +3,7 @@
 
 PORTNAME=	ncs
 PORTVERSION=	2.0.8
-PORTREVISION=	5
+PORTREVISION=	6
 CATEGORIES=	science parallel
 MASTER_SITES=	http://code-saturne.org/releases/
 

Modified: head/science/netcdf/Makefile
==============================================================================
--- head/science/netcdf/Makefile	Wed Sep  5 22:01:55 2018	(r479045)
+++ head/science/netcdf/Makefile	Wed Sep  5 22:05:23 2018	(r479046)
@@ -3,6 +3,7 @@
 
 PORTNAME=	netcdf
 PORTVERSION=	4.6.1
+PORTREVISION=	1
 CATEGORIES=	science
 MASTER_SITES=	https://www.unidata.ucar.edu/downloads/netcdf/ftp/ \
 		ftp://ftp.unidata.ucar.edu/pub/netcdf/ \

Modified: head/science/paraview/Makefile
==============================================================================
--- head/science/paraview/Makefile	Wed Sep  5 22:01:55 2018	(r479045)
+++ head/science/paraview/Makefile	Wed Sep  5 22:05:23 2018	(r479046)
@@ -3,7 +3,7 @@
 
 PORTNAME=	paraview
 DISTVERSION=	5.5.1
-PORTREVISION=	2
+PORTREVISION=	3
 CATEGORIES=	science graphics
 MASTER_SITES=	http://www.paraview.org/files/v${VERMAJORMINOR}/
 DISTNAME=	ParaView-v${PORTVERSION}

Modified: head/science/py-h5py/Makefile
==============================================================================
--- head/science/py-h5py/Makefile	Wed Sep  5 22:01:55 2018	(r479045)
+++ head/science/py-h5py/Makefile	Wed Sep  5 22:05:23 2018	(r479046)
@@ -3,6 +3,7 @@
 
 PORTNAME=	h5py
 PORTVERSION=	2.8.0
+PORTREVISION=	1
 CATEGORIES=	science python
 MASTER_SITES=	CHEESESHOP
 PKGNAMEPREFIX=	${PYTHON_PKGNAMEPREFIX}

Modified: head/science/py-netCDF4/Makefile
==============================================================================
--- head/science/py-netCDF4/Makefile	Wed Sep  5 22:01:55 2018	(r479045)
+++ head/science/py-netCDF4/Makefile	Wed Sep  5 22:05:23 2018	(r479046)
@@ -3,7 +3,7 @@
 
 PORTNAME=	netCDF4
 PORTVERSION=	1.3.1
-PORTREVISION=	1
+PORTREVISION=	2
 DISTVERSIONPREFIX=	v
 DISTVERSIONSUFFIX=	rel
 CATEGORIES=	science python

Modified: head/science/qmcpack/Makefile
==============================================================================
--- head/science/qmcpack/Makefile	Wed Sep  5 22:01:55 2018	(r479045)
+++ head/science/qmcpack/Makefile	Wed Sep  5 22:05:23 2018	(r479046)
@@ -3,6 +3,7 @@
 PORTNAME=	qmcpack
 DISTVERSIONPREFIX=	v
 DISTVERSION=	3.5.0
+PORTREVISION=	1
 CATEGORIES=	science
 
 MAINTAINER=	yuri at FreeBSD.org

Modified: head/science/rmf/Makefile
==============================================================================
--- head/science/rmf/Makefile	Wed Sep  5 22:01:55 2018	(r479045)
+++ head/science/rmf/Makefile	Wed Sep  5 22:05:23 2018	(r479046)
@@ -2,6 +2,7 @@
 
 PORTNAME=	rmf
 DISTVERSION=	1.1
+PORTREVISION=	1
 CATEGORIES=	science graphics
 
 MAINTAINER=	yuri at FreeBSD.org

Modified: head/science/silo/Makefile
==============================================================================
--- head/science/silo/Makefile	Wed Sep  5 22:01:55 2018	(r479045)
+++ head/science/silo/Makefile	Wed Sep  5 22:05:23 2018	(r479046)
@@ -4,7 +4,7 @@
 PORTNAME=	silo
 PORTVERSION=	4.10.2
 DISTVERSIONSUFFIX=	-bsd
-PORTREVISION=	7
+PORTREVISION=	8
 CATEGORIES=	science
 MASTER_SITES=	http://wci.llnl.gov/content/assets/docs/simulation/computer-codes/${PORTNAME}/silo-${PORTVERSION}/
 

Modified: head/science/triqs/Makefile
==============================================================================
--- head/science/triqs/Makefile	Wed Sep  5 22:01:55 2018	(r479045)
+++ head/science/triqs/Makefile	Wed Sep  5 22:05:23 2018	(r479046)
@@ -2,7 +2,7 @@
 
 PORTNAME=	triqs
 DISTVERSION=	2.0
-PORTREVISION=	2
+PORTREVISION=	3
 CATEGORIES=	science
 
 MAINTAINER=	yuri at FreeBSD.org

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