svn commit: r428835 - head/biology/protomol/files

[John Marino]

Author: marino
Date: Sun Dec 18 05:34:42 2016
New Revision: 428835
URL: https://svnweb.freebsd.org/changeset/ports/428835

Log:
  biology/protomol: Support build with C++11 (taken from dports)

Added:
  head/biology/protomol/files/patch-framework_base_PGM.cpp   (contents, props changed)
  head/biology/protomol/files/patch-framework_base_PPM.cpp   (contents, props changed)
  head/biology/protomol/files/patch-framework_base_stringutilities.cpp   (contents, props changed)
  head/biology/protomol/files/patch-framework_imd_imd.cpp   (contents, props changed)
  head/biology/protomol/files/patch-framework_imd_vmdsock.cpp   (contents, props changed)

Added: head/biology/protomol/files/patch-framework_base_PGM.cpp
==============================================================================
--- /dev/null	00:00:00 1970	(empty, because file is newly added)
+++ head/biology/protomol/files/patch-framework_base_PGM.cpp	Sun Dec 18 05:34:42 2016	(r428835)
@@ -0,0 +1,9 @@
+--- framework/base/PGM.cpp.orig	2005-05-07 14:40:23 UTC
++++ framework/base/PGM.cpp
+@@ -1,5 +1,6 @@
+ #include "PGM.h"
+ #include "PPM.h"
++#include <cstddef> // C++11 NULL
+ #include <vector> // NULL definition
+ 
+ namespace ProtoMol {

Added: head/biology/protomol/files/patch-framework_base_PPM.cpp
==============================================================================
--- /dev/null	00:00:00 1970	(empty, because file is newly added)
+++ head/biology/protomol/files/patch-framework_base_PPM.cpp	Sun Dec 18 05:34:42 2016	(r428835)
@@ -0,0 +1,9 @@
+--- framework/base/PPM.cpp.orig	2005-05-07 14:40:23 UTC
++++ framework/base/PPM.cpp
+@@ -1,5 +1,6 @@
+ #include "PPM.h"
+ #include "PGM.h"
++#include <cstddef> // C++11 NULL
+ #include <vector> // NULL definition
+ 
+ namespace ProtoMol {

Added: head/biology/protomol/files/patch-framework_base_stringutilities.cpp
==============================================================================
--- /dev/null	00:00:00 1970	(empty, because file is newly added)
+++ head/biology/protomol/files/patch-framework_base_stringutilities.cpp	Sun Dec 18 05:34:42 2016	(r428835)
@@ -0,0 +1,10 @@
+--- framework/base/stringutilities.cpp.orig	2005-05-07 14:40:24 UTC
++++ framework/base/stringutilities.cpp
+@@ -3,6 +3,7 @@
+ 
+ #include <algorithm>
+ #include <stdlib.h>
++#include <cstring>
+ #include <errno.h>
+ 
+ #include "Report.h"

Added: head/biology/protomol/files/patch-framework_imd_imd.cpp
==============================================================================
--- /dev/null	00:00:00 1970	(empty, because file is newly added)
+++ head/biology/protomol/files/patch-framework_imd_imd.cpp	Sun Dec 18 05:34:42 2016	(r428835)
@@ -0,0 +1,10 @@
+--- framework/imd/imd.cpp.orig	2005-05-07 14:40:25 UTC
++++ framework/imd/imd.cpp
+@@ -1,6 +1,7 @@
+ #include "imd.h"
+ #include "vmdsock.h"
+ #include <string>
++#include <cstring>
+ using std::string;
+ #include <errno.h>
+ #include <stdlib.h>

Added: head/biology/protomol/files/patch-framework_imd_vmdsock.cpp
==============================================================================
--- /dev/null	00:00:00 1970	(empty, because file is newly added)
+++ head/biology/protomol/files/patch-framework_imd_vmdsock.cpp	Sun Dec 18 05:34:42 2016	(r428835)
@@ -0,0 +1,10 @@
+--- framework/imd/vmdsock.cpp.orig	2005-05-07 14:40:25 UTC
++++ framework/imd/vmdsock.cpp
+@@ -32,6 +32,7 @@ namespace ProtoMol {
+ #include <stdio.h>
+ #include <stdlib.h>
+ #include <string>
++#include <cstring>
+ using std::string;
+ 
+ #if defined(WIN32)