svn commit: r381381 - in head/biology/seaview: . files
Muhammad Moinur Rahman
bofh at FreeBSD.org
Mon Mar 16 12:07:51 UTC 2015
Author: bofh
Date: Mon Mar 16 12:07:49 2015
New Revision: 381381
URL: https://svnweb.freebsd.org/changeset/ports/381381
QAT: https://qat.redports.org/buildarchive/r381381/
Log:
biology/seaview: UNBREAK
- Update version 4.5.2=>4.5.3.4
- Add LICENSE (GPLv3)
- Remove PDFLIBS as OPTIONS as it is no loner an optional requirement
PR: 198602
Submitted by: pi
Approved by: bapt marino (implicit)
Added:
head/biology/seaview/files/
head/biology/seaview/files/patch-Makefile (contents, props changed)
Modified:
head/biology/seaview/Makefile
head/biology/seaview/distinfo
Modified: head/biology/seaview/Makefile
==============================================================================
--- head/biology/seaview/Makefile Mon Mar 16 10:52:46 2015 (r381380)
+++ head/biology/seaview/Makefile Mon Mar 16 12:07:49 2015 (r381381)
@@ -2,8 +2,7 @@
# $FreeBSD$
PORTNAME= seaview
-PORTVERSION= 4.5.2
-PORTREVISION= 1
+PORTVERSION= 4.5.3.4
PORTEPOCH= 1
CATEGORIES= biology
MASTER_SITES= http://doua.prabi.fr/software/seaview_data/ \
@@ -13,9 +12,11 @@ DISTNAME= ${PORTNAME}_${PORTVERSION}
MAINTAINER= bofh at FreeBSD.org
COMMENT= Multiple DNA/protein sequence alignment editor
-BROKEN= Fails to link, tries to use internal fltk symbols
+LICENSE= GPLv3
-LIB_DEPENDS= libfltk.so:${PORTSDIR}/x11-toolkits/fltk
+LIB_DEPENDS= libfltk.so:${PORTSDIR}/x11-toolkits/fltk \
+ libpdf.so:${PORTSDIR}/print/pdflib \
+ libpng.so:${PORTSDIR}/graphics/png
WRKSRC= ${WRKDIR}/${PORTNAME}
@@ -35,15 +36,8 @@ PLIST_FILES= bin/seaview man/man1/seavie
DESKTOP_ENTRIES="SeaView" "" "${PREFIX}/share/pixmaps/seaview.xpm" "seaview" \
"Biology;Science;" true
-OPTIONS_DEFINE= PDFLIB
-OPTIONS_DEFAULT= PDFLIB
-PDFLIB_DESC= PDFlib support
-PDFLIB_LIB_DEPENDS= libpdf.so:${PORTSDIR}/print/pdflib
-PDFLIB_MAKE_ENV= LPDF='-L${LOCALBASE}/lib -lpdf'
-PDFLIB_MAKE_ENV_OFF= PDF_PS_FLAGS='-DNO_PDF'
-
post-patch:
- @${REINPLACE_CMD} -e \
+ ${REINPLACE_CMD} -e \
's|^\(PDF_PS_FLAGS\) |#\1 | ; \
s|^\(FLTK\) |#\1 | ; \
s|^\(USE_XFT\) |#\1 | ; \
@@ -58,7 +52,7 @@ do-install:
${STAGEDIR}${PREFIX}/bin)
(cd ${WRKSRC} && ${INSTALL_MAN} seaview.1 \
${STAGEDIR}${MANPREFIX}/man/man1)
- @${MKDIR} ${STAGEDIR}${DATADIR}
+ ${MKDIR} ${STAGEDIR}${DATADIR}
(cd ${WRKSRC} && ${INSTALL_DATA} seaview.html \
${STAGEDIR}${DATADIR})
(cd ${WRKSRC} && ${INSTALL_DATA} seaview.xpm \
Modified: head/biology/seaview/distinfo
==============================================================================
--- head/biology/seaview/distinfo Mon Mar 16 10:52:46 2015 (r381380)
+++ head/biology/seaview/distinfo Mon Mar 16 12:07:49 2015 (r381381)
@@ -1,2 +1,2 @@
-SHA256 (seaview_4.5.2.tar.gz) = 47fca9dd1910ca38a3a2fb869d55a4b3429c30b75193b7780233b27803e17938
-SIZE (seaview_4.5.2.tar.gz) = 411077
+SHA256 (seaview_4.5.3.4.tar.gz) = ba1a139eae5e210b058b11c290f343455fed236a8ae297bf0a69283acc90e182
+SIZE (seaview_4.5.3.4.tar.gz) = 416507
Added: head/biology/seaview/files/patch-Makefile
==============================================================================
--- /dev/null 00:00:00 1970 (empty, because file is newly added)
+++ head/biology/seaview/files/patch-Makefile Mon Mar 16 12:07:49 2015 (r381381)
@@ -0,0 +1,29 @@
+--- Makefile.orig 2014-09-11 16:03:57.000000000 +0200
++++ Makefile 2015-03-15 14:15:03.000000000 +0100
+@@ -11,19 +11,19 @@
+ #FLTK = $(HOME)/fltk-1.3.2
+
+ CFLTK = fltk-config
+-IFLTK = $(shell if [ '$(FLTK)' != '' ]; then echo '-I$(FLTK)'; fi)
++IFLTK = -I/usr/local/include
+ CONFIG = $(shell if [ '$(FLTK)' != '' ]; then echo '$(FLTK)/$(CFLTK)'; else echo '$(CFLTK)'; fi)
+-PDF_PS_FLAGS = $(shell if [ '$(PDF_INC)' != '' ]; then echo '-I$(PDF_INC)'; else echo '-DNO_PDF'; fi)
+-LPDF = $(shell if [ '$(PDF_LIB)' != '' ]; then echo '-L$(PDF_LIB) -lpdf'; fi)
++#PDF_PS_FLAGS = $(shell if [ '$(PDF_INC)' != '' ]; then echo '-I$(PDF_INC)'; else echo '-DNO_PDF'; fi)
++LPDF = -L/usr/local/lib -lpdf
+
+-EXTRALIBS = $(shell $(CONFIG) --use-images --ldflags) -ldl -lpthread -lz
++EXTRALIBS = $(shell $(CONFIG) --use-images --ldflags) -pthread -lz
+
+-CC = gcc
+-CXX = g++
++#CC = gcc
++#CXX = g++
+ CSRC = csrc
+
+ #DEBUG = -g
+-OPT = $(shell if [ '$(DEBUG)' = '' ]; then echo '-O3'; else echo '-O0'; fi)
++#OPT = $(shell if [ '$(DEBUG)' = '' ]; then echo '-O3'; else echo '-O0'; fi)
+
+ SVFLAGS = $(CPPFLAGS) $(CFLAGS) -Dunix $(OPT) -I. $(IFLTK) -I$(CSRC) $(DEBUG) $(HELPFILE) $(PHYMLNAME) $(PDF_PS_FLAGS)
+
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