svn commit: r483953 - in head/biology/bowtie: . files
Jason W. Bacon
jwb at FreeBSD.org
Sat Nov 3 23:16:51 UTC 2018
Author: jwb
Date: Sat Nov 3 23:16:49 2018
New Revision: 483953
URL: https://svnweb.freebsd.org/changeset/ports/483953
Log:
biology/bowtie: Revert previous commit with missing log message
Deleted:
head/biology/bowtie/files/patch-ebwt.h
Modified:
head/biology/bowtie/Makefile
Modified: head/biology/bowtie/Makefile
==============================================================================
--- head/biology/bowtie/Makefile Sat Nov 3 22:54:39 2018 (r483952)
+++ head/biology/bowtie/Makefile Sat Nov 3 23:16:49 2018 (r483953)
@@ -1,9 +1,9 @@
# $FreeBSD$
PORTNAME= bowtie
+PORTVERSION= 1.1.2
+PORTREVISION= 6
DISTVERSIONPREFIX= v
-DISTVERSION= 1.1.2
-PORTREVISION= 7
CATEGORIES= biology
MAINTAINER= jwb at FreeBSD.org
@@ -13,14 +13,13 @@ LICENSE= ART10
# May also work on other 64-bit platforms, but untested
ONLY_FOR_ARCHS= amd64
-
-USES= gmake perl5 python:run shebangfix
# FIXME: bowtie-align intermittently dumps core when compiled with clang
# GCC 4.2 does not provide good performance
USE_GCC= yes
+USES= gmake perl5 python:run shebangfix
USE_PERL5= run
-
-SHEBANG_FILES= scripts/*.pl bowtie bowtie-build bowtie-inspect
+SHEBANG_FILES= scripts/*.pl bowtie bowtie-build \
+ bowtie-inspect
USE_GITHUB= yes
GH_ACCOUNT= BenLangmead
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