svn commit: r487783 - in head/science: . h5z-zfp h5z-zfp/files

[Yuri Victorovich]

Author: yuri
Date: Wed Dec 19 02:19:38 2018
New Revision: 487783
URL: https://svnweb.freebsd.org/changeset/ports/487783

Log:
  New port: science/h5z-zfp: Registered ZFP compression plugin for HDF5

Added:
  head/science/h5z-zfp/
  head/science/h5z-zfp/Makefile   (contents, props changed)
  head/science/h5z-zfp/distinfo   (contents, props changed)
  head/science/h5z-zfp/files/
  head/science/h5z-zfp/files/patch-src_Makefile   (contents, props changed)
  head/science/h5z-zfp/pkg-descr   (contents, props changed)
Modified:
  head/science/Makefile

Modified: head/science/Makefile
==============================================================================
--- head/science/Makefile	Wed Dec 19 01:56:08 2018	(r487782)
+++ head/science/Makefile	Wed Dec 19 02:19:38 2018	(r487783)
@@ -95,6 +95,7 @@
     SUBDIR += gtamsanalyzer
     SUBDIR += gwyddion
     SUBDIR += h5utils
+    SUBDIR += h5z-zfp
     SUBDIR += harminv
     SUBDIR += hdf
     SUBDIR += hdf5

Added: head/science/h5z-zfp/Makefile
==============================================================================
--- /dev/null	00:00:00 1970	(empty, because file is newly added)
+++ head/science/h5z-zfp/Makefile	Wed Dec 19 02:19:38 2018	(r487783)
@@ -0,0 +1,38 @@
+# $FreeBSD$
+
+PORTNAME=	h5z-zfp
+DISTVERSIONPREFIX=	v
+DISTVERSION=	0.9.0
+CATEGORIES=	science
+
+MAINTAINER=	yuri at FreeBSD.org
+COMMENT=	Registered ZFP compression plugin for HDF5
+
+LICENSE=	BSD3CLAUSE
+LICENSE_FILE=	${WRKSRC}/LICENSE
+
+BUILD_DEPENDS=	bash:shells/bash
+LIB_DEPENDS=	libhdf5.so:science/hdf5 \
+		libzfp.so:devel/zfp
+
+USES=		gmake localbase
+USE_GITHUB=	yes
+GH_ACCOUNT=	LLNL
+GH_PROJECT=	${PORTNAME:tu}
+USE_LDCONFIG=	yes
+
+MAKE_ARGS=	SHELL=${LOCALBASE}/bin/bash \
+		HDF5_HOME=${STAGEDIR}${LOCALBASE} HDF5_LIB=${LOCALBASE}/lib \
+		ZFP_HOME=${STAGEDIR}${LOCALBASE} ZFP_LIB=${LOCALBASE}/lib \
+		PREPATH=-Wl,-rpath= SOEXT=so SHFLAG=-shared
+
+CFLAGS+=	-fPIC
+
+PLIST_FILES=	include/H5Zzfp.h \
+		include/H5Zzfp_lib.h \
+		include/H5Zzfp_plugin.h \
+		include/H5Zzfp_props.h \
+		lib/libh5zzfp.so \
+		plugin/libh5zzfp.so
+
+.include <bsd.port.mk>

Added: head/science/h5z-zfp/distinfo
==============================================================================
--- /dev/null	00:00:00 1970	(empty, because file is newly added)
+++ head/science/h5z-zfp/distinfo	Wed Dec 19 02:19:38 2018	(r487783)
@@ -0,0 +1,3 @@
+TIMESTAMP = 1545184047
+SHA256 (LLNL-H5Z-ZFP-v0.9.0_GH0.tar.gz) = 91d566e2d0175c929f114ce100151478450cfedee2d15fc99eb61fd931d9f389
+SIZE (LLNL-H5Z-ZFP-v0.9.0_GH0.tar.gz) = 123091

Added: head/science/h5z-zfp/files/patch-src_Makefile
==============================================================================
--- /dev/null	00:00:00 1970	(empty, because file is newly added)
+++ head/science/h5z-zfp/files/patch-src_Makefile	Wed Dec 19 02:19:38 2018	(r487783)
@@ -0,0 +1,49 @@
+--- src/Makefile.orig	2018-04-06 16:34:55 UTC
++++ src/Makefile
+@@ -30,33 +30,33 @@ H5Zzfp_props_f.o H5Zzfp_props_f.mod: H5Z
+ 	$(FC) -c $< -o $@ $(FCFLAGS) -I$(H5Z_ZFP_BASE) -I$(ZFP_INC) -I$(HDF5_INC)
+ 
+ # The filter member of the filter library
+-libh5zzfp.a(H5Zzfp_lib.o): H5Zzfp_lib.o
+-	$(AR) cr libh5zzfp.a $<
++libh5zzfp-s.$(SOEXT)(H5Zzfp_lib.o): H5Zzfp_lib.o
++	$(CC) -shared -o libh5zzfp-s.$(SOEXT) $<
+ 
+ # The C properties interface member of the filter library
+-libh5zzfp.a(H5Zzfp_props.o): H5Zzfp_props.o
+-	$(AR) cr libh5zzfp.a $<
++libh5zzfp-s.$(SOEXT)(H5Zzfp_props.o): H5Zzfp_props.o
++	$(CC) -shared -o libh5zzfp-s.$(SOEXT) $<
+ 
+ # The Fortran properties interface member of the filter library
+-libh5zzfp.a(H5Zzfp_props_f.o): H5Zzfp_props_f.o
+-	$(AR) cr libh5zzfp.a $<
++libh5zzfp-s.$(SOEXT)(H5Zzfp_props_f.o): H5Zzfp_props_f.o
++	$(CC) -shared -o libh5zzfp-s.$(SOEXT) $<
+ 
+ # Alias target for filter library, conditionally includes Fortran
+-LIBOBJ = libh5zzfp.a(H5Zzfp_lib.o) libh5zzfp.a(H5Zzfp_props.o)
++LIBOBJ = libh5zzfp-s.$(SOEXT)(H5Zzfp_lib.o) libh5zzfp-s.$(SOEXT)(H5Zzfp_props.o)
+ ifneq ($(FC),)
+-LIBOBJ += libh5zzfp.a(H5Zzfp_props_f.o)
++LIBOBJ += libh5zzfp-s.$(SOEXT)(H5Zzfp_props_f.o)
+ endif
+ lib: $(LIBOBJ)
+ 
+ all: lib plugin
+ 
+ install: all
+-	$(INSTALL) -d $(PREFIX)/{plugin,include,lib}
+-	$(INSTALL) plugin/libh5zzfp.$(SOEXT) $(PREFIX)/plugin
+-	$(INSTALL) libh5zzfp.a $(PREFIX)/lib
+-	$(INSTALL) -m 644 H5Zzfp.h H5Zzfp_lib.h H5Zzfp_plugin.h H5Zzfp_props.h $(PREFIX)/include
++	$(INSTALL) -d $(DESTDIR)$(PREFIX)/{plugin,include,lib}
++	$(INSTALL) plugin/libh5zzfp.$(SOEXT) $(DESTDIR)$(PREFIX)/plugin
++	$(INSTALL) libh5zzfp-s.$(SOEXT) $(DESTDIR)$(PREFIX)/lib/libh5zzfp.so
++	$(INSTALL) -m 644 H5Zzfp.h H5Zzfp_lib.h H5Zzfp_plugin.h H5Zzfp_props.h $(DESTDIR)$(PREFIX)/include
+ ifneq ($(FC),)
+-	$(INSTALL) -m 644 *.[mM][oO][dD] $(PREFIX)/include
++	$(INSTALL) -m 644 *.[mM][oO][dD] $(DESTDIR)$(PREFIX)/include
+ endif
+ 
+ clean:

Added: head/science/h5z-zfp/pkg-descr
==============================================================================
--- /dev/null	00:00:00 1970	(empty, because file is newly added)
+++ head/science/h5z-zfp/pkg-descr	Wed Dec 19 02:19:38 2018	(r487783)
@@ -0,0 +1,10 @@
+H5Z-ZFP is a compression filter for HDF5 using the ZFP compression library,
+supporting lossy compression of floating point and integer data to meet bitrate,
+accuracy, and/or precision targets. The filter uses the registered HDF5 filter
+ID, 32013. It supports single and double precision floating point and integer
+data chunked in 1, 2 or 3 dimensions. The filter will function on datasets of
+more than 3 dimensions, albiet at the probable expense of compression
+performance, as long as the chunking is such that no more than 3 dimensions of a
+chunk are non-unity.
+
+WWW: https://h5z-zfp.readthedocs.io/en/latest/