svn commit: r487707 - in head/biology/diamond: . files
Joseph Mingrone
jrm at FreeBSD.org
Mon Dec 17 19:12:40 UTC 2018
Author: jrm
Date: Mon Dec 17 19:12:38 2018
New Revision: 487707
URL: https://svnweb.freebsd.org/changeset/ports/487707
Log:
biology/diamond: Update to 0.9.23 plus fixes after release
Also:
- update license since upstream changed to GPLv3
- only build/package for amd64, since it is untested on other architectures
and currently does not build on i386
Upstream changes: https://github.com/bbuchfink/diamond/releases/tag/v0.9.23
Modified:
head/biology/diamond/Makefile (contents, props changed)
head/biology/diamond/distinfo (contents, props changed)
head/biology/diamond/files/patch-CMakeLists.txt (contents, props changed)
Modified: head/biology/diamond/Makefile
==============================================================================
--- head/biology/diamond/Makefile Mon Dec 17 19:12:05 2018 (r487706)
+++ head/biology/diamond/Makefile Mon Dec 17 19:12:38 2018 (r487707)
@@ -2,16 +2,17 @@
PORTNAME= diamond
DISTVERSIONPREFIX= v
-DISTVERSION= 0.9.22
+DISTVERSION= 0.9.23-6
+DISTVERSIONSUFFIX= -gfecab3e
CATEGORIES= biology
MAINTAINER= jrm at FreeBSD.org
COMMENT= BLAST-compatible local sequence aligner
-LICENSE= AGPLv3
+LICENSE= GPLv3
LICENSE_FILE= ${WRKSRC}/LICENSE
-ONLY_FOR_ARCHS= amd64 i386
+ONLY_FOR_ARCHS= amd64
USES= cmake:outsource
USE_GITHUB= yes
Modified: head/biology/diamond/distinfo
==============================================================================
--- head/biology/diamond/distinfo Mon Dec 17 19:12:05 2018 (r487706)
+++ head/biology/diamond/distinfo Mon Dec 17 19:12:38 2018 (r487707)
@@ -1,3 +1,3 @@
-TIMESTAMP = 1526318003
-SHA256 (bbuchfink-diamond-v0.9.22_GH0.tar.gz) = 35e518cfa0ac2fbc57e422d380bdb5123c6335742dd7965b76c34c95f241b729
-SIZE (bbuchfink-diamond-v0.9.22_GH0.tar.gz) = 412996
+TIMESTAMP = 1544706267
+SHA256 (bbuchfink-diamond-v0.9.23-6-gfecab3e_GH0.tar.gz) = 1d7c48b4da45854d75c9f90809a050fead6ffa8ad0b67447df7146e6849d5319
+SIZE (bbuchfink-diamond-v0.9.23-6-gfecab3e_GH0.tar.gz) = 424626
Modified: head/biology/diamond/files/patch-CMakeLists.txt
==============================================================================
--- head/biology/diamond/files/patch-CMakeLists.txt Mon Dec 17 19:12:05 2018 (r487706)
+++ head/biology/diamond/files/patch-CMakeLists.txt Mon Dec 17 19:12:38 2018 (r487707)
@@ -1,8 +1,8 @@
---- CMakeLists.txt.orig 2017-11-03 03:31:11 UTC
+--- CMakeLists.txt.orig 2018-12-07 02:22:51 UTC
+++ CMakeLists.txt
-@@ -9,16 +9,6 @@ if(BUILD_STATIC)
- set(CMAKE_EXE_LINKER_FLAGS "-static")
- endif()
+@@ -12,16 +12,6 @@ endif()
+
+ set(CMAKE_CXX_STANDARD 11)
-if(CMAKE_BUILD_MARCH)
- set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -march=${CMAKE_BUILD_MARCH}")
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