svn commit: r304822 - head/biology/py-biopython
Ruslan Mahmatkhanov
rm at FreeBSD.org
Tue Sep 25 08:06:43 UTC 2012
Author: rm
Date: Tue Sep 25 08:06:42 2012
New Revision: 304822
URL: http://svn.freebsd.org/changeset/ports/304822
Log:
- update to 1.60
while here:
- convert Makefile header into two-line format
- update COMMENT (indefinite article removed)
- change USE_PYTHON to just -2.7
- remove py-reportlab from BUILD_DEPENDS and kick PYTHON_SITELIBDIR from there
- tab -> space change in pkg-descr:WWW
PR: 171115
Submitted by: wen
Approved by: Mauricio Herrera Cuadra <mauricio at arareko dot net> (maintainer)
Modified:
head/biology/py-biopython/Makefile
head/biology/py-biopython/distinfo
head/biology/py-biopython/pkg-descr
head/biology/py-biopython/pkg-plist
Modified: head/biology/py-biopython/Makefile
==============================================================================
--- head/biology/py-biopython/Makefile Tue Sep 25 07:58:59 2012 (r304821)
+++ head/biology/py-biopython/Makefile Tue Sep 25 08:06:42 2012 (r304822)
@@ -1,29 +1,24 @@
-# New ports collection makefile for: py-biopython
-# Date created: 28 July 2000
-# Whom: Johann Visagie <johann at egenetics.com>
-#
+# Created by: Johann Visagie <johann at egenetics.com>
# $FreeBSD$
-#
PORTNAME= biopython
-PORTVERSION= 1.59
+PORTVERSION= 1.60
CATEGORIES= biology python
MASTER_SITES= http://www.biopython.org/DIST/
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
MAINTAINER= mauricio at arareko.net
-COMMENT= A collection of Python modules for bioinformatics
+COMMENT= Collection of Python modules for bioinformatics
BUILD_DEPENDS= ${PYNUMPY}
RUN_DEPENDS= ${PYNUMPY}
-USE_PYTHON= 2.5-2.7
+USE_PYTHON= -2.7
USE_PYDISTUTILS= easy_install
PYEASYINSTALL_ARCHDEP= yes
.if !defined(WITHOUT_REPORTLAB)
-BUILD_DEPENDS+= ${PYTHON_SITELIBDIR}/reportlab/__init__.py:${PORTSDIR}/print/py-reportlab
-RUN_DEPENDS+= ${PYTHON_SITELIBDIR}/reportlab/__init__.py:${PORTSDIR}/print/py-reportlab
+RUN_DEPENDS+= ${PYTHON_PKGNAMEPREFIX}reportlab>0:${PORTSDIR}/print/py-reportlab
.endif
.include <bsd.port.mk>
Modified: head/biology/py-biopython/distinfo
==============================================================================
--- head/biology/py-biopython/distinfo Tue Sep 25 07:58:59 2012 (r304821)
+++ head/biology/py-biopython/distinfo Tue Sep 25 08:06:42 2012 (r304822)
@@ -1,2 +1,2 @@
-SHA256 (biopython-1.59.tar.gz) = 588abf55de3d8e4deac611a0f810a9c5d9ce7e5868d3064f79efe6cabd18cacb
-SIZE (biopython-1.59.tar.gz) = 8577492
+SHA256 (biopython-1.60.tar.gz) = 73a2e6d700c8735832b6fc15dd08a9baa4136b072ff18760b9d22f563579d733
+SIZE (biopython-1.60.tar.gz) = 9501707
Modified: head/biology/py-biopython/pkg-descr
==============================================================================
--- head/biology/py-biopython/pkg-descr Tue Sep 25 07:58:59 2012 (r304821)
+++ head/biology/py-biopython/pkg-descr Tue Sep 25 08:06:42 2012 (r304822)
@@ -12,5 +12,4 @@ stable.
This port includes optional support for Biopython-CORBA, a CORBA interface
built to the BioCorba standard (http://biocorba.org/).
-Authors: <biopython-dev at biopython.org>
-WWW: http://biopython.org/
+WWW: http://biopython.org/
Modified: head/biology/py-biopython/pkg-plist
==============================================================================
--- head/biology/py-biopython/pkg-plist Tue Sep 25 07:58:59 2012 (r304821)
+++ head/biology/py-biopython/pkg-plist Tue Sep 25 08:06:42 2012 (r304822)
@@ -1,12 +1,3 @@
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/_py3k.py
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/_py3k.pyc
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/_py3k.pyo
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/cpairwise2.py
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/cpairwise2.pyc
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/cpairwise2.pyo
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/trie.py
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/trie.pyc
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/trie.pyo
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Affy/CelFile.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Affy/CelFile.pyc
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Affy/CelFile.pyo
@@ -112,10 +103,10 @@
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Cluster/__init__.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Cluster/__init__.pyc
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Cluster/__init__.pyo
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Cluster/cluster.so
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Cluster/cluster.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Cluster/cluster.pyc
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Cluster/cluster.pyo
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Cluster/cluster.so
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Compass/__init__.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Compass/__init__.pyc
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Compass/__init__.pyo
@@ -367,15 +358,15 @@
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/GA/__init__.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/GA/__init__.pyc
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/GA/__init__.pyo
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/GenBank/__init__.py
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/GenBank/__init__.pyc
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/GenBank/__init__.pyo
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/GenBank/Record.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/GenBank/Record.pyc
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/GenBank/Record.pyo
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/GenBank/Scanner.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/GenBank/Scanner.pyc
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/GenBank/Scanner.pyo
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/GenBank/__init__.py
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/GenBank/__init__.pyc
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/GenBank/__init__.pyo
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/GenBank/utils.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/GenBank/utils.pyc
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/GenBank/utils.pyo
@@ -460,10 +451,10 @@
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/KDTree/KDTree.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/KDTree/KDTree.pyc
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/KDTree/KDTree.pyo
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/KDTree/_CKDTree.so
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/KDTree/_CKDTree.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/KDTree/_CKDTree.pyc
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/KDTree/_CKDTree.pyo
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/KDTree/_CKDTree.so
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/KDTree/__init__.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/KDTree/__init__.pyc
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/KDTree/__init__.pyo
@@ -491,9 +482,6 @@
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Medline/__init__.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Medline/__init__.pyc
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Medline/__init__.pyo
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Motif/_pwm.py
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Motif/_pwm.pyc
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Motif/_pwm.pyo
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Motif/Applications/_AlignAce.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Motif/Applications/_AlignAce.pyc
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Motif/Applications/_AlignAce.pyo
@@ -521,6 +509,9 @@
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Motif/__init__.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Motif/__init__.pyc
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Motif/__init__.pyo
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Motif/_pwm.py
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Motif/_pwm.pyc
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Motif/_pwm.pyo
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Motif/_pwm.so
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/NMR/NOEtools.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/NMR/NOEtools.pyc
@@ -579,37 +570,10 @@
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Nexus/__init__.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Nexus/__init__.pyc
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Nexus/__init__.pyo
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Nexus/cnexus.so
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Nexus/cnexus.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Nexus/cnexus.pyc
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Nexus/cnexus.pyo
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/__init__.py
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/__init__.pyc
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/__init__.pyo
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/_parse_baseml.py
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/_parse_baseml.pyc
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/_parse_baseml.pyo
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/_parse_codeml.py
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/_parse_codeml.pyc
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/_parse_codeml.pyo
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/_parse_yn00.py
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/_parse_yn00.pyc
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/_parse_yn00.pyo
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/_paml.py
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/_paml.pyc
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/_paml.pyo
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/baseml.py
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/baseml.pyc
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/baseml.pyo
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/chi2.py
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/chi2.pyc
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/chi2.pyo
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/codeml.py
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/codeml.pyc
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/codeml.pyo
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/yn00.py
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/yn00.pyc
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/yn00.pyo
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Nexus/cnexus.so
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/PDB/AbstractPropertyMap.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/PDB/AbstractPropertyMap.pyc
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/PDB/AbstractPropertyMap.pyo
@@ -694,6 +658,10 @@
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/PDB/__init__.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/PDB/__init__.pyc
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/PDB/__init__.pyo
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/PDB/mmCIF/MMCIFlex.py
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/PDB/mmCIF/MMCIFlex.pyc
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/PDB/mmCIF/MMCIFlex.pyo
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/PDB/mmCIF/MMCIFlex.so
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/PDB/mmCIF/__init__.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/PDB/mmCIF/__init__.pyc
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/PDB/mmCIF/__init__.pyo
@@ -718,12 +686,15 @@
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Pathway/__init__.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Pathway/__init__.pyc
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Pathway/__init__.pyo
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/Applications/__init__.py
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/Applications/__init__.pyc
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/Applications/__init__.pyo
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/Applications/_Phyml.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/Applications/_Phyml.pyc
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/Applications/_Phyml.pyo
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/Applications/_Raxml.py
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/Applications/_Raxml.pyc
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/Applications/_Raxml.pyo
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/Applications/__init__.py
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/Applications/__init__.pyc
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/Applications/__init__.pyo
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/BaseTree.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/BaseTree.pyc
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/BaseTree.pyo
@@ -736,6 +707,33 @@
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/NexusIO.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/NexusIO.pyc
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/NexusIO.pyo
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/__init__.py
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/__init__.pyc
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/__init__.pyo
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/_paml.py
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/_paml.pyc
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/_paml.pyo
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/_parse_baseml.py
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/_parse_baseml.pyc
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/_parse_baseml.pyo
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/_parse_codeml.py
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/_parse_codeml.pyc
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/_parse_codeml.pyo
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/_parse_yn00.py
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/_parse_yn00.pyc
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/_parse_yn00.pyo
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/baseml.py
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/baseml.pyc
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/baseml.pyo
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/chi2.py
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/chi2.pyc
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/chi2.pyo
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/codeml.py
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/codeml.pyc
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/codeml.pyo
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/yn00.py
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/yn00.pyc
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML/yn00.pyo
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PhyloXML.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PhyloXML.pyc
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PhyloXML.pyo
@@ -863,6 +861,9 @@
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SCOP/__init__.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SCOP/__init__.pyc
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SCOP/__init__.pyo
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SCOP/three_to_one_dict.py
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SCOP/three_to_one_dict.pyc
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SCOP/three_to_one_dict.pyo
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SVDSuperimposer/SVDSuperimposer.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SVDSuperimposer/SVDSuperimposer.pyc
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SVDSuperimposer/SVDSuperimposer.pyo
@@ -1016,6 +1017,15 @@
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/__init__.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/__init__.pyc
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/__init__.pyo
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/_py3k.py
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/_py3k.pyc
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/_py3k.pyo
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/bgzf.py
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/bgzf.pyc
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/bgzf.pyo
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/cpairwise2.py
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/cpairwise2.pyc
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/cpairwise2.pyo
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/cpairwise2.so
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/kNN.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/kNN.pyc
@@ -1023,6 +1033,9 @@
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/pairwise2.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/pairwise2.pyc
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/pairwise2.pyo
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/trie.py
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/trie.pyc
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/trie.pyo
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/trie.so
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/triefind.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/triefind.pyc
@@ -1042,81 +1055,81 @@
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/BioSQL/__init__.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/BioSQL/__init__.pyc
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/BioSQL/__init__.pyo
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Affy
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Align/Applications
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Align
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/AlignIO
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Alphabet
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Application
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Blast
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/CAPS
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Cluster
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Compass
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Crystal
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Data
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Emboss
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Entrez/DTDs
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Entrez
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/ExPASy
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/FSSP
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/GA/Crossover
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/GA/Mutation
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/GA/Repair
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/GA/Selection
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/GA
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/GenBank
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Geo
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Graphics/GenomeDiagram
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Graphics
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/HMM
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/KDTree
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/KEGG/Compound
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/KEGG/Enzyme
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/KEGG/Map
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/KEGG
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Medline
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Motif/Applications
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Motif/Parsers
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Motif
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/NMR
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/NeuralNetwork/BackPropagation
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/NeuralNetwork/Gene
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/NeuralNetwork
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Nexus
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/PDB/mmCIF
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/PDB
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Pathway/Rep
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Pathway
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/Applications
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/PopGen/Async
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/PopGen/FDist
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/PopGen/GenePop
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/PopGen/SimCoal/data
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/PopGen/SimCoal
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/PopGen
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Restriction/_Update
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Restriction
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SCOP
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SVDSuperimposer
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SeqIO
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SeqUtils
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Sequencing/Applications
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Sequencing
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Statistics
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SubsMat
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SwissProt
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/TogoWS
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/UniGene
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Wise
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/BioSQL
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/EGG-INFO/SOURCES.txt
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/EGG-INFO/PKG-INFO
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/EGG-INFO/SOURCES.txt
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/EGG-INFO/dependency_links.txt
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/EGG-INFO/native_libs.txt
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/EGG-INFO/not-zip-safe
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/EGG-INFO/top_level.txt
@dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/EGG-INFO
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/BioSQL
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Wise
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/UniGene
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/TogoWS
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SwissProt
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SubsMat
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Statistics
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Sequencing/Applications
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Sequencing
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SeqUtils
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SeqIO
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SVDSuperimposer
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SCOP
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Restriction/_Update
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Restriction
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/PopGen/SimCoal/data
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/PopGen/SimCoal
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/PopGen/GenePop
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/PopGen/FDist
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/PopGen/Async
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/PopGen
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/PAML
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo/Applications
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Phylo
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Pathway/Rep
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Pathway
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/PDB/mmCIF
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/PDB
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Nexus
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/NeuralNetwork/Gene
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/NeuralNetwork/BackPropagation
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/NeuralNetwork
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/NMR
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Motif/Parsers
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Motif/Applications
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Motif
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Medline
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/KEGG/Map
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/KEGG/Enzyme
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/KEGG/Compound
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/KEGG
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/KDTree
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/HMM
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Graphics/GenomeDiagram
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Graphics
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Geo
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/GenBank
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/GA/Selection
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/GA/Repair
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/GA/Mutation
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/GA/Crossover
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/GA
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/FSSP
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/ExPASy
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Entrez/DTDs
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Entrez
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Emboss
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Data
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Crystal
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Compass
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Cluster
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/CAPS
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Blast
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Application
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Alphabet
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/AlignIO
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Align/Applications
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Align
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Affy
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio
@dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%
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