biojava port fails on jakarta-commons-dbcp
Kayven Riese
kayvey at gmail.com
Wed Dec 24 01:12:32 UTC 2008
My prompt for root is "KV_BSD#"
Here is my java version:
KV_BSD# java -version
java version "1.6.0_07"
Diablo Java(TM) SE Runtime Environment (build 1.6.0_07-b02)
Diablo Java HotSpot(TM) Client VM (build 10.0-b23, mixed mode, sharing)
Here is my BSD build:
KV_BSD# uname -a
FreeBSD KV_BSD 7.0-RELEASE FreeBSD 7.0-RELEASE #0: Sun Feb 24 19:59:52 UTC
2008 root at logan.cse.buffalo.edu:/usr/obj/usr/src/sys/GENERIC i386
I was trying to build this port:
KV_BSD# pwd
/usr/ports/biology/biojava
KV_BSD#
--
Here are the error messages:
===> Building for jakarta-commons-dbcp-1.2.1_2
Buildfile: build.xml
BUILD FAILED
java.lang.UnsupportedClassVersionError: Bad version number in .class file
at java.lang.ClassLoader.defineClass1(Native Method)
at java.lang.ClassLoader.defineClass(ClassLoader.java:620)
at
java.security.SecureClassLoader.defineClass(SecureClassLoader.java:124)
at java.net.URLClassLoader.defineClass(URLClassLoader.java:260)
at java.net.URLClassLoader.access$100(URLClassLoader.java:56)
at java.net.URLClassLoader$1.run(URLClassLoader.java:195)
at java.security.AccessController.doPrivileged(Native Method)
at java.net.URLClassLoader.findClass(URLClassLoader.java:188)
at java.lang.ClassLoader.loadClass(ClassLoader.java:306)
at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:268)
at java.lang.ClassLoader.loadClass(ClassLoader.java:299)
at java.lang.ClassLoader.loadClass(ClassLoader.java:251)
at javax.xml.parsers.FactoryFinder.newInstance(FactoryFinder.java:88)
at
javax.xml.parsers.FactoryFinder.findJarServiceProvider(FactoryFinder.java:278)
at javax.xml.parsers.FactoryFinder.find(FactoryFinder.java:185)
at
javax.xml.parsers.SAXParserFactory.newInstance(SAXParserFactory.java:107)
at
org.apache.tools.ant.util.JAXPUtils.newParserFactory(JAXPUtils.java:120)
at
org.apache.tools.ant.util.JAXPUtils.getNSParserFactory(JAXPUtils.java:104)
at
org.apache.tools.ant.util.JAXPUtils.getNamespaceXMLReader(JAXPUtils.java:172)
at
org.apache.tools.ant.helper.ProjectHelper2.parse(ProjectHelper2.java:185)
at
org.apache.tools.ant.helper.ProjectHelper2.parse(ProjectHelper2.java:138)
at
org.apache.tools.ant.ProjectHelper.configureProject(ProjectHelper.java:96)
at org.apache.tools.ant.Main.runBuild(Main.java:683)
at org.apache.tools.ant.Main.startAnt(Main.java:199)
at org.apache.tools.ant.launch.Launcher.run(Launcher.java:257)
at org.apache.tools.ant.launch.Launcher.main(Launcher.java:104)
Total time: 0 seconds
java.lang.UnsupportedClassVersionError: Bad version number in .class file
at java.lang.ClassLoader.defineClass1(Native Method)
at java.lang.ClassLoader.defineClass(ClassLoader.java:620)
at
java.security.SecureClassLoader.defineClass(SecureClassLoader.java:124)
at java.net.URLClassLoader.defineClass(URLClassLoader.java:260)
at java.net.URLClassLoader.access$100(URLClassLoader.java:56)
at java.net.URLClassLoader$1.run(URLClassLoader.java:195)
at java.security.AccessController.doPrivileged(Native Method)
at java.net.URLClassLoader.findClass(URLClassLoader.java:188)
at java.lang.ClassLoader.loadClass(ClassLoader.java:306)
at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:268)
at java.lang.ClassLoader.loadClass(ClassLoader.java:299)
at java.lang.ClassLoader.loadClass(ClassLoader.java:251)
at javax.xml.parsers.FactoryFinder.newInstance(FactoryFinder.java:88)
at
javax.xml.parsers.FactoryFinder.findJarServiceProvider(FactoryFinder.java:278)
at javax.xml.parsers.FactoryFinder.find(FactoryFinder.java:185)
at
javax.xml.parsers.SAXParserFactory.newInstance(SAXParserFactory.java:107)
at
org.apache.tools.ant.util.JAXPUtils.newParserFactory(JAXPUtils.java:120)
at
org.apache.tools.ant.util.JAXPUtils.getNSParserFactory(JAXPUtils.java:104)
at
org.apache.tools.ant.util.JAXPUtils.getNamespaceXMLReader(JAXPUtils.java:172)
at
org.apache.tools.ant.helper.ProjectHelper2.parse(ProjectHelper2.java:185)
at
org.apache.tools.ant.helper.ProjectHelper2.parse(ProjectHelper2.java:138)
at
org.apache.tools.ant.ProjectHelper.configureProject(ProjectHelper.java:96)
at org.apache.tools.ant.Main.runBuild(Main.java:683)
at org.apache.tools.ant.Main.startAnt(Main.java:199)
at org.apache.tools.ant.launch.Launcher.run(Launcher.java:257)
at org.apache.tools.ant.launch.Launcher.main(Launcher.java:104)
Bad version number in .class file
*** Error code 1
Stop in /usr/ports/java/jakarta-commons-dbcp.
*** Error code 1
Stop in /usr/ports/java/jakarta-commons-dbcp.
/usr/ports/biology/biojava
I tried googling, have a feeling that java is the culprit, but I am getting
a stomach ache now.
*----------------------------------------------------------*
Kayven Riese, BSCS,
MS (Physiology and Biophysics)
(415) 902 5513 cellular
http://kayve.net
Webmaster http://ChessYoga.org
*----------------------------------------------------------*
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