science/avogadro compile failure

David Southwell david at vizion2000.net
Wed Nov 16 16:08:53 UTC 2011


avogadro fails with the error reports shown below.


Thanks in advance for any guidance
David

Scanning dependencies of target avogadro-app
[ 90%] Building CXX object avogadro/src/CMakeFiles/avogadro-
app.dir/editcommands.cpp.o
[ 90%] Building CXX object avogadro/src/CMakeFiles/avogadro-
app.dir/projecttreeitem.cpp.o
[ 90%] Building C object avogadro/src/CMakeFiles/avogadro-
app.dir/__/gl2ps/gl2ps.c.o
[ 91%] Building CXX object libavogadro/src/python/CMakeFiles/python-
module.dir/moleculefile.cpp.o
[ 91%] Building CXX object avogadro/src/CMakeFiles/avogadro-
app.dir/projectdelegates/atomdelegate.cpp.o
[ 91%] Building CXX object libavogadro/src/python/CMakeFiles/python-
module.dir/toolgroup.cpp.o
[ 91%] Building CXX object avogadro/src/CMakeFiles/avogadro-
app.dir/projectdelegates/bonddelegate.cpp.o
[ 92%] Building CXX object avogadro/src/CMakeFiles/avogadro-
app.dir/projectdelegates/labeldelegate.cpp.o
[ 92%] Building CXX object libavogadro/src/python/CMakeFiles/python-
module.dir/pluginmanager.cpp.o
[ 92%] Building CXX object avogadro/src/CMakeFiles/avogadro-
app.dir/projectdelegates/moleculedelegate.cpp.o
[ 92%] Building CXX object avogadro/src/CMakeFiles/avogadro-
app.dir/projectdelegates/residuedelegate.cpp.o
[ 92%] Building CXX object libavogadro/src/python/CMakeFiles/python-
module.dir/cube.cpp.o
[ 92%] Building CXX object avogadro/src/CMakeFiles/avogadro-
app.dir/projectdelegates/selectiondelegate.cpp.o
[ 92%] Building CXX object libavogadro/src/python/CMakeFiles/python-
module.dir/atom.cpp.o
[ 92%] Building CXX object avogadro/src/CMakeFiles/avogadro-
app.dir/projecttreemodel.cpp.o
[ 93%] Building CXX object avogadro/src/CMakeFiles/avogadro-
app.dir/projecttreemodeldelegate.cpp.o
[ 93%] Building CXX object libavogadro/src/python/CMakeFiles/python-
module.dir/elementtranslator.cpp.o
[ 93%] Building CXX object avogadro/src/CMakeFiles/avogadro-
app.dir/pluginitemmodel.cpp.o
[ 93%] Building CXX object avogadro/src/CMakeFiles/avogadro-
app.dir/flattabwidget.cpp.o
[ 93%] Building CXX object avogadro/src/CMakeFiles/avogadro-
app.dir/engineitemdelegate.cpp.o
[ 94%] Building CXX object libavogadro/src/python/CMakeFiles/python-
module.dir/eigen.cpp.o
[ 94%] Building CXX object libavogadro/src/python/CMakeFiles/python-
module.dir/tool.cpp.o
[ 94%] Building CXX object avogadro/src/CMakeFiles/avogadro-
app.dir/engineitemmodel.cpp.o
[ 94%] Building CXX object libavogadro/src/python/CMakeFiles/python-
module.dir/periodictableview.cpp.o
[ 94%] Building CXX object avogadro/src/CMakeFiles/avogadro-
app.dir/engineviewwidget.cpp.o
[ 94%] Building CXX object avogadro/src/CMakeFiles/avogadro-
app.dir/primitiveitemmodel.cpp.o
[ 94%] Building CXX object avogadro/src/CMakeFiles/avogadro-
app.dir/aboutdialog.cpp.o
[ 94%] Building CXX object avogadro/src/CMakeFiles/avogadro-
app.dir/pluginlistview.cpp.o
[ 94%] Building CXX object libavogadro/src/python/CMakeFiles/python-
module.dir/primitivelist.cpp.o
[ 94%] Building CXX object libavogadro/src/python/CMakeFiles/python-
module.dir/camera.cpp.o
[ 94%] Building CXX object libavogadro/src/python/CMakeFiles/python-
module.dir/sip.cpp.o
[ 95%] Building CXX object avogadro/src/CMakeFiles/avogadro-
app.dir/detachedview.cpp.o
[ 95%] Building CXX object avogadro/src/CMakeFiles/avogadro-
app.dir/glgraphicsview.cpp.o
/usr/ports/science/avogadro/work/avogadro-1.0.1/libavogadro/src/python/sip.cpp: 
In static member function 'static void* 
QClass_converters<T>::QClass_from_PyQt(PyObject*)':
/usr/ports/science/avogadro/work/avogadro-1.0.1/libavogadro/src/python/sip.cpp:207: 
error: 'struct sipSimpleWrapper' has no member named 'u'
[ 95%] Building CXX object avogadro/src/CMakeFiles/avogadro-
app.dir/enginelistview.cpp.o
*** Error code 1
[ 95%] Building CXX object avogadro/src/CMakeFiles/avogadro-
app.dir/primitivetreeview.cpp.o
[ 95%] Building CXX object avogadro/src/CMakeFiles/avogadro-
app.dir/enginecolorswidget.cpp.o
[ 95%] Building CXX object avogadro/src/CMakeFiles/avogadro-
app.dir/projecttreeeditor.cpp.o
1 error
*** Error code 2
[ 95%] Building CXX object avogadro/src/CMakeFiles/avogadro-
app.dir/application.cpp.o
[ 95%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/main.cpp.o
[ 95%] Building CXX object avogadro/src/CMakeFiles/avogadro-
app.dir/savedialog.cpp.o
[ 96%] Building CXX object avogadro/src/CMakeFiles/avogadro-
app.dir/addenginedialog.cpp.o
[ 96%] Building CXX object avogadro/src/CMakeFiles/avogadro-
app.dir/pluginsettings.cpp.o
[ 96%] Building CXX object avogadro/src/CMakeFiles/avogadro-
app.dir/settingsdialog.cpp.o
[ 97%] Building CXX object avogadro/src/CMakeFiles/avogadro-
app.dir/engineprimitiveswidget.cpp.o
[ 97%] Building CXX object avogadro/src/CMakeFiles/avogadro-
app.dir/importdialog.cpp.o
[ 98%] Building CXX object avogadro/src/CMakeFiles/avogadro-
app.dir/mainwindow.cpp.o
[ 98%] Building CXX object avogadro/src/CMakeFiles/avogadro-
app.dir/qrc_avogadro.cxx.o
Linking CXX executable ../../bin/avogadro
[ 98%] Built target avogadro-app
1 error
*** Error code 2
1 error
*** Error code 1

Stop in /usr/ports/science/avogadro.
*** Error code 1

Stop in /usr/ports/science/avogadro.


More information about the freebsd-ports mailing list