[Bug 228776] [NEW PORT] biology/infernal: Search sequence databases for structural RNA homologs

bugzilla-noreply at freebsd.org bugzilla-noreply at freebsd.org
Wed Jun 6 06:46:04 UTC 2018


https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=228776

            Bug ID: 228776
           Summary: [NEW PORT] biology/infernal: Search sequence databases
                    for structural RNA homologs
           Product: Ports & Packages
           Version: Latest
          Hardware: Any
                OS: Any
            Status: New
          Severity: Affects Only Me
          Priority: ---
         Component: Individual Port(s)
          Assignee: ports-bugs at FreeBSD.org
          Reporter: mzaki at niid.go.jp

Created attachment 194041
  --> https://bugs.freebsd.org/bugzilla/attachment.cgi?id=194041&action=edit
svn diff

Infernal is a tool for searching DNA sequence database for RNA structure and
sequence similarities. The Rfam database of RNA families is based on Infernal,
and we can search DNA sequences for structural homologs of Rfam families.

WWW: http://eddylab.org/infernal/


Tested by: poudriere testport (amd64/i386 11.1/10.4) & make test (amd64/i386
11.1)

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