[Bug 229480] [NEW PORT] biology/stringtie: Transcript assembly and quantification for RNA-seq

bugzilla-noreply at freebsd.org bugzilla-noreply at freebsd.org
Tue Jul 3 03:38:59 UTC 2018


https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=229480

            Bug ID: 229480
           Summary: [NEW PORT] biology/stringtie: Transcript assembly and
                    quantification for RNA-seq
           Product: Ports & Packages
           Version: Latest
          Hardware: Any
                OS: Any
            Status: New
          Severity: Affects Some People
          Priority: ---
         Component: Individual Port(s)
          Assignee: ports-bugs at FreeBSD.org
          Reporter: mzaki at niid.go.jp

Created attachment 194846
  --> https://bugs.freebsd.org/bugzilla/attachment.cgi?id=194846&action=edit
svn diff

StringTie version 1.3.4d

Citation:
Pertea et al. (2015) StringTie enables improved reconstruction of a
transcriptome from RNA-seq reads.
Nature Biotechnology 33: 290-295 doi:10.1038/nbt.3122

WWW: http://www.ccb.jhu.edu/software/stringtie/

Tested by: poudriere testport (amd64/i386 11.1/10.4)

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