[Bug 223561] biology/hmmer: update to 3.1b2

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https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=223561

            Bug ID: 223561
           Summary: biology/hmmer: update to 3.1b2
           Product: Ports & Packages
           Version: Latest
          Hardware: Any
                OS: Any
            Status: New
          Severity: Affects Many People
          Priority: ---
         Component: Individual Port(s)
          Assignee: freebsd-ports-bugs at FreeBSD.org
          Reporter: mzaki at niid.go.jp
                CC: bacon4000 at gmail.com
             Flags: maintainer-feedback?(bacon4000 at gmail.com)
                CC: bacon4000 at gmail.com

Created attachment 187879
  --> https://bugs.freebsd.org/bugzilla/attachment.cgi?id=187879&action=edit
svn diff for biology/hmmer

Update biology/hmmer to 3.1b2 with changes of MASTER_SITES & WWW (remove
BROKEN)

other changes
*Make verbose output during build (V=1)
*Update DOCFILES & EXAMPLES
*Tune up post-install process
*New OPTION: TEST

The port passed make test & poudriere testport in my environment (10.4
amd64/i386).

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