[Bug 216004] biology/ncbi-blast+: package requires libgomp

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https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=216004

            Bug ID: 216004
           Summary: biology/ncbi-blast+: package requires libgomp
           Product: Ports & Packages
           Version: Latest
          Hardware: Any
                OS: Any
            Status: New
          Severity: Affects Some People
          Priority: ---
         Component: Individual Port(s)
          Assignee: freebsd-ports-bugs at FreeBSD.org
          Reporter: weeks at iastate.edu

It appears that the amd64 ncbi-blast+-2.5.0 package was compiled with gcc >=
5.0, as it requires a libgomp supporting OpenMP 4.0; however, this is not
reflected in the dependencies:


$ pkg which /usr/local/bin/blastn
/usr/local/bin/blastn was installed by package ncbi-blast+-2.5.0
$ pkg info -d ncbi-blast+        
ncbi-blast+-2.5.0:
        python27-2.7.13_1
        pcre-8.39_1
        p5-List-MoreUtils-0.416
        perl5-5.24.1.r4_1
        gcc-4.9.4
$ blastn -version
/usr/lib/libgomp.so.1: version GOMP_4.0 required by /usr/local/bin/blastn not
found
weeks at cicer:ncbi-blast+$ LD_LIBRARY_PATH=/usr/local/lib/gcc49 blastn -version
/usr/lib/libgomp.so.1: version GOMP_4.0 required by /usr/local/bin/blastn not
found
$ LD_LIBRARY_PATH=/usr/local/lib/gcc50 blastn -version
/usr/lib/libgomp.so.1: version GOMP_4.0 required by /usr/local/bin/blastn not
found

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