[Bug 214785] math/R fails to compile after lang/gcc update on 11-RELEASE-p3

bugzilla-noreply at freebsd.org bugzilla-noreply at freebsd.org
Wed Nov 23 15:18:06 UTC 2016


https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=214785

            Bug ID: 214785
           Summary: math/R fails to compile after lang/gcc update on
                    11-RELEASE-p3
           Product: Ports & Packages
           Version: Latest
          Hardware: Any
                OS: Any
            Status: New
          Severity: Affects Only Me
          Priority: ---
         Component: Individual Port(s)
          Assignee: freebsd-ports-bugs at FreeBSD.org
          Reporter: taozhenext at gmail.com
                CC: gerald at FreeBSD.org, jrm at freebsd.org
                CC: gerald at FreeBSD.org, jrm at freebsd.org

Hi,
I am running FreeBSD 11.0-RELEASE-p3. math/R fails to compile after lang/gcc
was updated. 
Please help. Thanks.

--- R.bin ---
gcc49 -std=gnu99 -O2 -pipe  -DLIBICONV_PLUG -fstack-protector
-Wl,-rpath=/usr/lcal/lib/gcc49 -isystem /usr/local/include -fno-strict-aliasing
-flto -Wl,--expot-dynamic -fopenmp -L../../lib -Wl,-rpath=/usr/local/lib/gcc49 
-L/usr/local/li/gcc49 -B/usr/local/bin -L/usr/local/lib -L/usr/local/lib
-fstack-protector -Wl-rpath=/usr/local/lib/gcc49 -L/usr/local/lib/gcc49 -o
R.bin Rmain.o -lR
../../lib/libR.so: undefined reference to `tre_regfree'
../../lib/libR.so: undefined reference to `tre_version'
../../lib/libR.so: undefined reference to `tre_regnexecb'
../../lib/libR.so: undefined reference to `tre_regexecb'
../../lib/libR.so: undefined reference to `tre_regerror'
../../lib/libR.so: undefined reference to `tre_regwcomp'
../../lib/libR.so: undefined reference to `tre_regaparams_default'
../../lib/libR.so: undefined reference to `tre_regncompb'
../../lib/libR.so: undefined reference to `tre_regaexec'
../../lib/libR.so: undefined reference to `tre_regaexecb'
../../lib/libR.so: undefined reference to `tre_regwexec'
../../lib/libR.so: undefined reference to `tre_regawexec'
../../lib/libR.so: undefined reference to `tre_regexec'
../../lib/libR.so: undefined reference to `tre_regcomp'
../../lib/libR.so: undefined reference to `tre_regcompb'
collect2: error: ld returned 1 exit status
*** [R.bin] Error code 1

make[5]: stopped in /usr/ports/math/R/work/R-3.3.2/src/main
1 error

make[5]: stopped in /usr/ports/math/R/work/R-3.3.2/src/main
*** [R] Error code 2

make[4]: stopped in /usr/ports/math/R/work/R-3.3.2/src/main
1 error

make[4]: stopped in /usr/ports/math/R/work/R-3.3.2/src/main
*** [R] Error code 1

make[3]: stopped in /usr/ports/math/R/work/R-3.3.2/src
1 error

make[3]: stopped in /usr/ports/math/R/work/R-3.3.2/src
*** [R] Error code 1

make[2]: stopped in /usr/ports/math/R/work/R-3.3.2
1 error

make[2]: stopped in /usr/ports/math/R/work/R-3.3.2
===> Compilation failed unexpectedly.

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