[Bug 210630] ports-mgmt/porttools: fails with "does not belong to any package"

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https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=210630

            Bug ID: 210630
           Summary: ports-mgmt/porttools: fails with "does not belong to
                    any package"
           Product: Ports & Packages
           Version: Latest
          Hardware: Any
                OS: Any
            Status: New
          Severity: Affects Only Me
          Priority: ---
         Component: Individual Port(s)
          Assignee: skreuzer at FreeBSD.org
          Reporter: trasz at FreeBSD.org
             Flags: maintainer-feedback?(skreuzer at FreeBSD.org)
          Assignee: skreuzer at FreeBSD.org

I'm trying to test a new port using "port test", and it fails like this:

Error: /tmp/linuxcnc-devel-20160626/lib/tcltk/linuxcnc/hal.so is linked to
/usr/local/lib/.mesa/libGL.so that does not belong to any package
Error: /tmp/linuxcnc-devel-20160626/lib/tcltk/linuxcnc/hal.so is linked to
/usr/local/lib/libXinerama.so.1 that does not belong to any package
Error: /usr/local/lib/python2.7/site-packages/_togl.so is linked to
/usr/local/lib/libGLU.so.1 that does not belong to any package
Error: /usr/local/lib/python2.7/site-packages/_togl.so is linked to
/usr/local/lib/libXmu.so.6 that does not belong to any package
*** Error code 1

However:

[root at brick:/home/trasz/linuxcnc-devel]# pkg which /usr/local/lib/libGLU.so.1
/usr/local/lib/libGLU.so.1 was installed by package libGLU-9.0.0_2
[root at brick:/home/trasz/linuxcnc-devel]# pkg which /usr/local/lib/libXmu.so.6
/usr/local/lib/libXmu.so.6 was installed by package libXmu-1.1.2_3,1

I've tried to debug it, but couldn't find the code that does the check -
grepping for the error string didn't show anything.

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