[Bug 211393] math/R: update patches and options
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Sat Jul 30 05:30:15 UTC 2016
https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=211393
--- Comment #8 from Joseph Mingrone <jrm at ftfl.ca> ---
Thanks. ATLAS and OpenBLAS compiled locally from ports with the default
options were indeed faster.
|---------------+------------------------------------------+----------|
| Implemenation | Overall Results | [1] |
|---------------+------------------------------------------+----------|
| Internal | http://ftfl.ca/misc/R-bm-25-internal.out | 5.97 |
| NetLib | http://ftfl.ca/misc/R-bm-25-netlib.out | 6.12 |
| Atlas | http://ftfl.ca/misc/R-bm-25-atlas.out | 0.87 |
| OpenBLAS | http://ftfl.ca/misc/R-bm-25-openblas.out | 0.67 |
|---------------+------------------------------------------+----------|
[1] time (s) to calculate the determinant of a 2500x2500 random matrix
Since both ATLAS and OpenBLAS tune to specific hardware, and OpenBLAS is giving
segmentation faults [2], I'll leave the default to RBLAS.
[2]
address 0x0, cause 'memory not mapped'
Possible actions:
1: abort (with core dump, if enabled)
2: normal R exit
3: exit R without saving workspace
4: exit R saving workspace
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