[Bug 203295] [new port] biology/fasttree: Very simple port for phylogenetic trees from sequence alignments

bugzilla-noreply at freebsd.org bugzilla-noreply at freebsd.org
Wed Sep 23 20:02:10 UTC 2015


https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=203295

            Bug ID: 203295
           Summary: [new port] biology/fasttree: Very simple port for
                    phylogenetic trees from sequence alignments
           Product: Ports & Packages
           Version: Latest
          Hardware: Any
                OS: Any
            Status: New
          Severity: Affects Some People
          Priority: ---
         Component: Individual Port(s)
          Assignee: freebsd-ports-bugs at FreeBSD.org
          Reporter: jwbacon at tds.net

Created attachment 161314
  --> https://bugs.freebsd.org/bugzilla/attachment.cgi?id=161314&action=edit
SHAR archive

FastTree infers approximately-maximum-likelihood phylogenetic trees from
alignments of nucleotide or protein sequences. FastTree can handle alignments
with up to a million of sequences in a reasonable amount of time and memory.

WWW: http://www.microbesonline.org/fasttree/

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