ports/180503: science/gromacs: Update to version 4.6.3

[KATO Tsuguru]

>Number:         180503
>Category:       ports
>Synopsis:       science/gromacs: Update to version 4.6.3
>Confidential:   no
>Severity:       non-critical
>Priority:       low
>Responsible:    freebsd-ports-bugs
>State:          open
>Quarter:        
>Keywords:       
>Date-Required:
>Class:          change-request
>Submitter-Id:   current-users
>Arrival-Date:   Fri Jul 12 18:10:00 UTC 2013
>Closed-Date:
>Last-Modified:
>Originator:     KATO Tsuguru
>Release:        FreeBSD 8.4-RELEASE i386
>Organization:
>Environment:
>Description:
- Update to version 4.6.3

>How-To-Repeat:
>Fix:

diff -urN /usr/ports/science/gromacs/Makefile science/gromacs/Makefile
--- /usr/ports/science/gromacs/Makefile	2013-06-21 03:54:00.000000000 +0900
+++ science/gromacs/Makefile	2013-07-13 00:00:00.000000000 +0900
@@ -2,7 +2,7 @@
 # $FreeBSD: head/science/gromacs/Makefile 319827 2013-06-04 08:19:33Z miwi $
 
 PORTNAME=	gromacs
-PORTVERSION=	4.6.2
+PORTVERSION=	4.6.3
 CATEGORIES=	science
 MASTER_SITES=	ftp://ftp.gromacs.org/pub/gromacs/
 
@@ -22,7 +22,9 @@
 MPICH_DESC=	MPI support using net/mpich2
 OMPI_DESC=	MPI support using net/openmpi
 
-USES=		cmake pkgconfig
+USES=		cmake pkgconfig shebangfix
+SHEBANG_FILES=	admin/*.pl scripts/*.pl scripts/*.sh src/gmxlib/selection/*.sh
+bash_CMD=	${SH}
 USE_FORTRAN=	yes
 USE_PERL5=	yes
 CMAKE_ARGS=	-DBLAS_LIBRARIES:FILEPATH="${BLAS_LIBS}" \
@@ -131,9 +133,5 @@
 	@${FIND} ${WRKSRC} -name "GMXRC.*" | ${XARGS} ${REINPLACE_CMD} -e \
 		's|LDLIB/pkgconfig|LDLIB/../libdata/pkgconfig| ; \
 		 s|LDLIB}/pkgconfig|LDLIB}/../libdata/pkgconfig|'
-	@${FIND} ${WRKSRC} -name "*.pl" | ${XARGS} ${REINPLACE_CMD} -e \
-		's|/usr/bin/perl|${PERL}|'
-	@${FIND} ${WRKSRC} -name "*.sh" | ${XARGS} ${REINPLACE_CMD} -e \
-		's|/bin/bash|/bin/sh|'
 
 .include <bsd.port.mk>
diff -urN /usr/ports/science/gromacs/distinfo science/gromacs/distinfo
--- /usr/ports/science/gromacs/distinfo	2013-06-21 03:54:00.000000000 +0900
+++ science/gromacs/distinfo	2013-07-13 00:00:00.000000000 +0900
@@ -1,2 +1,2 @@
-SHA256 (gromacs-4.6.2.tar.gz) = 7bcccd15f02e7163455e1f342fc13e609e9088735b962d96afe0a79aaad92d4c
-SIZE (gromacs-4.6.2.tar.gz) = 10986082
+SHA256 (gromacs-4.6.3.tar.gz) = b748f912b606032471e7da2db349db44f53d717b2490ad9316eb962bd75eccd4
+SIZE (gromacs-4.6.3.tar.gz) = 10985615
>Release-Note:
>Audit-Trail:
>Unformatted: