ports/181483: [PATCH] science/py27-h5py: update to 2.1.1_3
Johannes Meixner
xmj at chaot.net
Fri Aug 23 11:20:01 UTC 2013
>Number: 181483
>Category: ports
>Synopsis: [PATCH] science/py27-h5py: update to 2.1.1_3
>Confidential: no
>Severity: non-critical
>Priority: low
>Responsible: freebsd-ports-bugs
>State: open
>Quarter:
>Keywords:
>Date-Required:
>Class: update
>Submitter-Id: current-users
>Arrival-Date: Fri Aug 23 11:20:00 UTC 2013
>Closed-Date:
>Last-Modified:
>Originator: Johannes Meixner
>Release: FreeBSD 10.0-CURRENT amd64
>Organization:
Goldener Grund OÜ
>Environment:
System: FreeBSD mx12 10.0-CURRENT FreeBSD 10.0-CURRENT #1 r254650M: Thu Aug 22 13:44:45 EEST
>Description:
- Update to 2.1.1_3
- Force LIB_DEPEND on science/hdf5-18
- Add regression-tests
portlint: ok
porttest: ok
testport: ok
redports: https://redports.org/buildarchive/20130822182000-31799/
Port maintainer (fmysh at iijmio-mail.jp) is cc'd.
Generated with FreeBSD Port Tools 0.99_8 (mode: update, diff: ports)
>How-To-Repeat:
>Fix:
--- py27-h5py-2.1.1_3.patch begins here ---
diff -ruN /usr/ports/science/py-h5py/Makefile ./Makefile
--- /usr/ports/science/py-h5py/Makefile 2013-08-13 14:59:54.000000000 +0300
+++ ./Makefile 2013-08-23 09:55:20.186965193 +0300
@@ -1,9 +1,9 @@
# Created by: TAOKA Fumiyoshi
-# $FreeBSD: science/py-h5py/Makefile 324659 2013-08-13 11:59:54Z koobs $
+# $FreeBSD$
PORTNAME= h5py
-PORTVERSION= 1.2.1
-PORTREVISION= 2
+PORTVERSION= 2.1.1
+PORTREVISION= 3
CATEGORIES= science python
MASTER_SITES= ${MASTER_SITE_GOOGLE_CODE}
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
@@ -13,20 +13,16 @@
BUILD_DEPENDS= ${PYNUMPY}
RUN_DEPENDS= ${PYNUMPY}
+LIB_DEPENDS= hdf5:${PORTSDIR}/science/hdf5-18
-OPTIONS_DEFINE= NEW_HDF5
-NEW_HDF5_DESC= Use port science/hdf5-18 instead of science/hdf5
-OPTIONSFILE?= ${PORT_DBDIR}/py-${PORTNAME}/options
+USE_PYTHON= 2.6+
+USE_PYDISTUTILS= yes
-.include <bsd.port.options.mk>
-.if ${PORT_OPTIONS:MNEW_HDF5}
-LIB_DEPENDS= hdf5:${PORTSDIR}/science/hdf5-18
-.else
-LIB_DEPENDS= hdf5:${PORTSDIR}/science/hdf5
-.endif
-
-USE_PYTHON= 2.5+
-USE_PYDISTUTILS= easy_install
-PYEASYINSTALL_ARCHDEP= yes
+post-patch:
+ ${REINPLACE_CMD} -e 's|%%LOCALBASE%%|${LOCALBASE}|' \
+ ${WRKSRC}/setup.py
+
+regression-test: build
+ @cd ${WRKSRC} && ${PYTHON_CMD} ${PYSETUP} test
.include <bsd.port.mk>
diff -ruN /usr/ports/science/py-h5py/distinfo ./distinfo
--- /usr/ports/science/py-h5py/distinfo 2012-07-14 17:29:18.000000000 +0300
+++ ./distinfo 2013-08-17 17:24:00.687876612 +0300
@@ -1,2 +1,2 @@
-SHA256 (h5py-1.2.1.tar.gz) = 2263c966a87adff606a677214d3af7593d3ae300b6b6b0a77412a9f3ae7a8e43
-SIZE (h5py-1.2.1.tar.gz) = 1462012
+SHA256 (h5py-2.1.1.tar.gz) = 6e4f135268436cda1dc19a081dc5384d431057344fa1121a886016cd8c89c716
+SIZE (h5py-2.1.1.tar.gz) = 984939
diff -ruN /usr/ports/science/py-h5py/files/patch-setup.py ./files/patch-setup.py
--- /usr/ports/science/py-h5py/files/patch-setup.py 1970-01-01 03:00:00.000000000 +0300
+++ ./files/patch-setup.py 2013-08-22 21:08:11.467992855 +0300
@@ -0,0 +1,12 @@
+--- ./setup.py.orig 2013-01-07 04:37:53.000000000 +0200
++++ ./setup.py 2013-08-11 16:44:02.685227932 +0300
+@@ -68,6 +68,9 @@
+ elif sys.platform == 'darwin':
+ COMPILER_SETTINGS['include_dirs'] += ['/opt/local/include']
+ COMPILER_SETTINGS['library_dirs'] += ['/opt/local/lib']
++ elif sys.platform.startswith('freebsd'):
++ COMPILER_SETTINGS['include_dirs'] += ['%%LOCALBASE%%/include']
++ COMPILER_SETTINGS['library_dirs'] += ['%%LOCALBASE%%/lib']
+ COMPILER_SETTINGS['runtime_library_dirs'] = [op.abspath(x) for x in COMPILER_SETTINGS['library_dirs']]
+
+ MODULES = ['defs','_errors','_objects','_proxy', 'h5fd', 'h5z',
diff -ruN /usr/ports/science/py-h5py/pkg-descr ./pkg-descr
--- /usr/ports/science/py-h5py/pkg-descr 2013-08-13 14:59:54.000000000 +0300
+++ ./pkg-descr 2013-08-17 17:24:00.687876612 +0300
@@ -1,6 +1,6 @@
The h5py package provides both a high- and low-level interface to the HDF5
-library from Python. The low-level interface is intended to be a complete
-wrapping of the HDF5 1.6 and 1.8 APIs, while the high-level component supports
+library from Python. The low-level interface is intended to be a complete
+wrapping of the HDF5 1.8 API, while the high-level component supports
Python-style object-oriented access to HDF5 files, datasets and groups.
The goal of this package is not to provide yet another scientific data
diff -ruN /usr/ports/science/py-h5py/pkg-plist ./pkg-plist
--- /usr/ports/science/py-h5py/pkg-plist 2012-07-14 17:29:18.000000000 +0300
+++ ./pkg-plist 2013-08-17 19:09:55.878361462 +0300
@@ -1,184 +1,145 @@
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-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/EGG-INFO/SOURCES.txt
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/EGG-INFO/dependency_links.txt
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/EGG-INFO/native_libs.txt
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/EGG-INFO/not-zip-safe
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/EGG-INFO/top_level.txt
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/h5py/__init__.py
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/h5py/__init__.pyc
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/h5py/__init__.pyo
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/h5py/_ipy_completer.py
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/h5py/_ipy_completer.pyc
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/h5py/_ipy_completer.pyo
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/h5py/_stub.py
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/h5py/_stub.pyc
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/h5py/_stub.pyo
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/h5py/_sync.py
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/h5py/_sync.pyc
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/h5py/_sync.pyo
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/h5py/filters.py
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/h5py/filters.pyc
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/h5py/filters.pyo
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/h5py/h5.py
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- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/EGG-INFO
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+%%PYTHON_SITELIBDIR%%/h5py/_hl/attrs.pyo
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+%%PYTHON_SITELIBDIR%%/h5py/_hl/filters.pyo
+%%PYTHON_SITELIBDIR%%/h5py/h5f.pyx
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+%%PYTHON_SITELIBDIR%%/h5py/lowtest/test_objects.py
+%%PYTHON_SITELIBDIR%%/h5py/lowtest/test_h5.py
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+%%PYTHON_SITELIBDIR%%/h5py/lowtest/test_h5.pyc
+%%PYTHON_SITELIBDIR%%/h5py/lowtest/test_h5t.pyc
+%%PYTHON_SITELIBDIR%%/h5py/lowtest/__init__.pyc
+%%PYTHON_SITELIBDIR%%/h5py/lowtest/test_h5p.pyo
+%%PYTHON_SITELIBDIR%%/h5py/lowtest/test_objects.pyo
+%%PYTHON_SITELIBDIR%%/h5py/lowtest/test_h5.pyo
+%%PYTHON_SITELIBDIR%%/h5py/lowtest/test_h5t.pyo
+%%PYTHON_SITELIBDIR%%/h5py/lowtest/__init__.pyo
+%%PYTHON_SITELIBDIR%%/h5py/h5a.pyx
+%%PYTHON_SITELIBDIR%%/h5py/h5z.pyx
+%%PYTHON_SITELIBDIR%%/h5py/ipy_completer.py
+%%PYTHON_SITELIBDIR%%/h5py/h5s.pyx
+%%PYTHON_SITELIBDIR%%/h5py/h5t.pyx
+%%PYTHON_SITELIBDIR%%/h5py/__init__.pyc
+%%PYTHON_SITELIBDIR%%/h5py/highlevel.pyc
+%%PYTHON_SITELIBDIR%%/h5py/version.pyc
+%%PYTHON_SITELIBDIR%%/h5py/api_gen.pyc
+%%PYTHON_SITELIBDIR%%/h5py/ipy_completer.pyc
+%%PYTHON_SITELIBDIR%%/h5py/__init__.pyo
+%%PYTHON_SITELIBDIR%%/h5py/highlevel.pyo
+%%PYTHON_SITELIBDIR%%/h5py/version.pyo
+%%PYTHON_SITELIBDIR%%/h5py/api_gen.pyo
+%%PYTHON_SITELIBDIR%%/h5py/ipy_completer.pyo
+ at dirrm %%PYTHON_SITELIBDIR%%/h5py/_hl/tests
+ at dirrm %%PYTHON_SITELIBDIR%%/h5py/_hl
+ at dirrm %%PYTHON_SITELIBDIR%%/h5py/lowtest
+ at dirrm %%PYTHON_SITELIBDIR%%/h5py
--- py27-h5py-2.1.1_3.patch ends here ---
>Release-Note:
>Audit-Trail:
>Unformatted:
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