ports/147194: [patch][maintainer] biology/migrate: update to latest version
Glen Barber
glen.j.barber at gmail.com
Sat May 29 18:20:04 UTC 2010
>Number: 147194
>Category: ports
>Synopsis: [patch][maintainer] biology/migrate: update to latest version
>Confidential: no
>Severity: non-critical
>Priority: low
>Responsible: freebsd-ports-bugs
>State: open
>Quarter:
>Keywords:
>Date-Required:
>Class: maintainer-update
>Submitter-Id: current-users
>Arrival-Date: Sat May 29 18:20:03 UTC 2010
>Closed-Date:
>Last-Modified:
>Originator: Glen Barber
>Release: 8.1-PRERELEASE
>Organization:
>Environment:
FreeBSD orion 8.1-PRERELEASE FreeBSD 8.1-PRERELEASE #0 r208605: Thu May 27 21:03:37 EDT 2010 root at orion:/usr/obj/usr/src/sys/ORION amd64
>Description:
Update biology/migrate from 3.1.4 to 3.1.6
Files changed:
- Makefile
- distinfo
- files/patch-Makefile.in
>How-To-Repeat:
>Fix:
Patch attached with submission follows:
diff -ruN /usr/ports/biology/migrate.orig/Makefile /usr/ports/biology/migrate/Makefile
--- /usr/ports/biology/migrate.orig/Makefile 2010-05-09 09:59:34.000000000 -0400
+++ /usr/ports/biology/migrate/Makefile 2010-05-29 13:48:46.074321595 -0400
@@ -6,7 +6,7 @@
#
PORTNAME= migrate
-PORTVERSION= 3.1.4
+PORTVERSION= 3.1.6
CATEGORIES= biology
MASTER_SITES= http://people.sc.fsu.edu/~beerli/popgen/currentversion/
DISTNAME= ${PORTNAME}-${PORTVERSION}.src
diff -ruN /usr/ports/biology/migrate.orig/distinfo /usr/ports/biology/migrate/distinfo
--- /usr/ports/biology/migrate.orig/distinfo 2010-05-09 09:59:34.000000000 -0400
+++ /usr/ports/biology/migrate/distinfo 2010-05-29 13:48:52.121076140 -0400
@@ -1,3 +1,3 @@
-MD5 (migrate-3.1.4.src.tar.gz) = a1ffa3baa8a78b17b2dcb387de7801ee
-SHA256 (migrate-3.1.4.src.tar.gz) = f09d35f544865f1cde3677b9b347b8a5de9e907f81d4f509e8f15c2fd28ea110
-SIZE (migrate-3.1.4.src.tar.gz) = 2227530
+MD5 (migrate-3.1.6.src.tar.gz) = 2a01e72d203029cb2176d4f895cea8b0
+SHA256 (migrate-3.1.6.src.tar.gz) = 03bd8668d620b3db16b7da63b3ba4a09d343c1e36133c267e9ceee397775d032
+SIZE (migrate-3.1.6.src.tar.gz) = 2808609
diff -ruN /usr/ports/biology/migrate.orig/files/patch-Makefile.in /usr/ports/biology/migrate/files/patch-Makefile.in
--- /usr/ports/biology/migrate.orig/files/patch-Makefile.in 2010-05-09 09:59:34.000000000 -0400
+++ /usr/ports/biology/migrate/files/patch-Makefile.in 2010-05-29 13:56:34.834880269 -0400
@@ -3,7 +3,7 @@
@@ -80,7 +80,7 @@
# -DNEXUSTREE print nexus tree instead of plain newick trees
# -UEP calculates unique event polymorphism
- NEWSTUFF =
+ NEWSTUFF = -DNEWVERSION -DBFDEBUG
-COMMONFLAGS = $(ARCH) $(MACOSVERSION) $(NEWSTUFF) -DHIGHBITS -DHAVE_CONFIG_H -DHAVE_MALLOCWRAP $(CFLAGS_MT) $(HARDWARECFLAGS)
+COMMONFLAGS = $(MACOSVERSION) $(NEWSTUFF) -DHIGHBITS -DHAVE_CONFIG_H -DHAVE_MALLOCWRAP $(CFLAGS_MT) $(HARDWARECFLAGS)
#
>Release-Note:
>Audit-Trail:
>Unformatted:
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