ports/137625: [Maintainer Update]biology/paml:update to 4.3

[Wen Heping]

>Number:         137625
>Category:       ports
>Synopsis:       [Maintainer Update]biology/paml:update to 4.3
>Confidential:   no
>Severity:       non-critical
>Priority:       low
>Responsible:    freebsd-ports-bugs
>State:          open
>Quarter:        
>Keywords:       
>Date-Required:
>Class:          maintainer-update
>Submitter-Id:   current-users
>Arrival-Date:   Mon Aug 10 10:00:12 UTC 2009
>Closed-Date:
>Last-Modified:
>Originator:     Wen Heping
>Release:        FreeBSD 8.0-Current
>Organization:
ChangAn Middle School
>Environment:
FreeBSD fb8.wenjing.com 8.0-CURRENT FreeBSD 8.0-CURRENT #0: Sun Mar 22 22:12:06 CST 2009     root at fb8.wenjing.com:/usr/obj/usr/src/sys/GENERIC  i386
>Description:
update to 4.3 from 4.2b
>How-To-Repeat:

>Fix:


Patch attached with submission follows:

--- Makefile.orig	2009-08-10 17:04:00.000000000 +0800
+++ Makefile	2009-08-10 17:11:05.000000000 +0800
@@ -6,7 +6,7 @@
 #
 
 PORTNAME=	paml
-PORTVERSION=	4.2b
+PORTVERSION=	4.3
 CATEGORIES=	biology
 MASTER_SITES=	http://abacus.gene.ucl.ac.uk/software/
 DISTNAME=	${PORTNAME}${PORTVERSION}
@@ -15,7 +15,7 @@
 COMMENT=	Phylogenetic Analysis by Maximum Likelihood (PAML)
 
 USE_GMAKE=	YES
-WRKSRC=		${WRKDIR}/${PORTNAME}42/src
+WRKSRC=		${WRKDIR}/${PORTNAME}43/src
 MAKE_ARGS=	CC="${CC}" CFLAGS="${CFLAGS}"
 
 BINARIES=	baseml basemlg chi2 codeml evolver pamp yn00
@@ -28,7 +28,7 @@
 .if !defined(NOPORTDOCS)
 	${MKDIR} ${DOCSDIR}
 .for f in ${DOC_FILES}
-	${INSTALL_DATA} ${WRKDIR}/${PORTNAME}42/doc/${f} ${DOCSDIR}
+	${INSTALL_DATA} ${WRKDIR}/${PORTNAME}43/doc/${f} ${DOCSDIR}
 .endfor
 .endif
 
--- distinfo.orig	2009-08-10 17:04:07.000000000 +0800
+++ distinfo	2009-08-10 17:05:40.000000000 +0800
@@ -1,3 +1,3 @@
-MD5 (paml4.2b.tar.gz) = 9f1f5842534aeeb8101d402abaa1fee1
-SHA256 (paml4.2b.tar.gz) = fc11d44cfb31d303ec619156649dd2f264de743c64ebe21263cdffb09064904a
-SIZE (paml4.2b.tar.gz) = 2637368
+MD5 (paml4.3.tar.gz) = 67ef796d0a61d959192c548043496018
+SHA256 (paml4.3.tar.gz) = eeed8c73e6ef468663dc77c8bb7b47e41358a2efca09da918c584c3009931fc4
+SIZE (paml4.3.tar.gz) = 2811793


>Release-Note:
>Audit-Trail:
>Unformatted: