ports/123218: [MAINTAINER] update blat to latest version
Fernan Aguero
fernan at iib.unsam.edu.ar
Tue Apr 29 14:30:03 UTC 2008
>Number: 123218
>Category: ports
>Synopsis: [MAINTAINER] update blat to latest version
>Confidential: no
>Severity: serious
>Priority: medium
>Responsible: freebsd-ports-bugs
>State: open
>Quarter:
>Keywords:
>Date-Required:
>Class: maintainer-update
>Submitter-Id: current-users
>Arrival-Date: Tue Apr 29 14:30:03 UTC 2008
>Closed-Date:
>Last-Modified:
>Originator: Fernan Aguero
>Release: FreeBSD 6.3-RELEASE-p1 i386
>Organization:
IIB-UNSAM
>Environment:
FreeBSD gama.iib.unsam.edu.ar 6.3-RELEASE-p1 FreeBSD 6.3-RELEASE-p1 #0:
Wed Apr 2 18:37:14 ART 2008
fernan at gama.iib.unsam.edu.ar:/usr/obj/freebsd/freebsd-6.3/src/sys/GAMA
i386
<machine, os, target, libraries (multiple lines)>
>Description:
<precise description of the problem (multiple lines)>
BLAT is marked as BROKEN because it does not compile with GCC 4.2
http://portsmon.freebsd.org/portoverview.py?category=biology&portname=blat
This update brings blat to version 34, which fixes this issue
(tested with USE_GCC=4.2+ on FreeBSD-6.3, i386)
>How-To-Repeat:
<code/input/activities to reproduce the problem (multiple lines)>
>Fix:
<how to correct or work around the problem, if known (multiple lines)>
--- blat.diff begins here ---
diff -ruN --exclude CVS /usr/ports/biology/blat/Makefile blat/Makefile
--- /usr/ports/biology/blat/Makefile 2008-01-30 22:36:17.000000000 -0300
+++ blat/Makefile 2008-04-29 08:47:44.000000000 -0300
@@ -7,7 +7,7 @@
#
PORTNAME= blat
-PORTVERSION= 33
+PORTVERSION= 34
CATEGORIES= biology
MASTER_SITES= http://www.soe.ucsc.edu/~kent/src/
DISTNAME= ${PORTNAME}Src${PORTVERSION}
diff -ruN --exclude CVS /usr/ports/biology/blat/distinfo blat/distinfo
--- /usr/ports/biology/blat/distinfo 2006-03-15 07:26:11.000000000 -0300
+++ blat/distinfo 2008-04-29 08:49:14.000000000 -0300
@@ -1,3 +1,3 @@
-MD5 (blatSrc33.zip) = 5f9d3a4a88e57dfc435b5dd465209918
-SHA256 (blatSrc33.zip) = 4ca932721f529d815e64b51940c94d8136faec52c6b8bf8c3fcd3706337d9a29
-SIZE (blatSrc33.zip) = 1308517
+MD5 (blatSrc34.zip) = c8637145ea70acf1ced1a670d37d7b98
+SHA256 (blatSrc34.zip) = b764828fdf8ef4c9994ae4b6148340a776493475edb573b6adf63ae7ca9b2629
+SIZE (blatSrc34.zip) = 2142975
--- blat.diff ends here ---
--4SFOXa2GPu3tIq4H
Content-Type: text/x-diff; charset=us-ascii
Content-Disposition: attachment; filename="blat.diff"
diff -ruN --exclude CVS /usr/ports/biology/blat/Makefile blat/Makefile
--- /usr/ports/biology/blat/Makefile 2008-01-30 22:36:17.000000000 -0300
+++ blat/Makefile 2008-04-29 08:47:44.000000000 -0300
@@ -7,7 +7,7 @@
#
PORTNAME= blat
-PORTVERSION= 33
+PORTVERSION= 34
CATEGORIES= biology
MASTER_SITES= http://www.soe.ucsc.edu/~kent/src/
DISTNAME= ${PORTNAME}Src${PORTVERSION}
diff -ruN --exclude CVS /usr/ports/biology/blat/distinfo blat/distinfo
--- /usr/ports/biology/blat/distinfo 2006-03-15 07:26:11.000000000 -0300
+++ blat/distinfo 2008-04-29 08:49:14.000000000 -0300
@@ -1,3 +1,3 @@
-MD5 (blatSrc33.zip) = 5f9d3a4a88e57dfc435b5dd465209918
-SHA256 (blatSrc33.zip) = 4ca932721f529d815e64b51940c94d8136faec52c6b8bf8c3fcd3706337d9a29
-SIZE (blatSrc33.zip) = 1308517
+MD5 (blatSrc34.zip) = c8637145ea70acf1ced1a670d37d7b98
+SHA256 (blatSrc34.zip) = b764828fdf8ef4c9994ae4b6148340a776493475edb573b6adf63ae7ca9b2629
+SIZE (blatSrc34.zip) = 2142975
--4SFOXa2GPu3tIq4H--
>Release-Note:
>Audit-Trail:
>Unformatted:
--4SFOXa2GPu3tIq4H
Content-Type: text/plain; charset=us-ascii
Content-Disposition: inline
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