ports/91715: [ maintainer-update ] update biology/blast
Fernan Aguero
fernan at iib.unsam.edu.ar
Thu Jan 12 18:00:26 UTC 2006
>Number: 91715
>Category: ports
>Synopsis: [ maintainer-update ] update biology/blast
>Confidential: no
>Severity: non-critical
>Priority: low
>Responsible: freebsd-ports-bugs
>State: open
>Quarter:
>Keywords:
>Date-Required:
>Class: maintainer-update
>Submitter-Id: current-users
>Arrival-Date: Thu Jan 12 18:00:21 GMT 2006
>Closed-Date:
>Last-Modified:
>Originator: Fernan Aguero
>Release: FreeBSD 6.0-RELEASE i386
>Organization:
IIB-UNSAM
>Environment:
FreeBSD omega.iib.unsam.edu.ar 6.0-RELEASE-p2 FreeBSD 6.0-RELEASE-p2 #0: Thu Jan 12 11:28:24 ART 2006 fernan at omega.iib.unsam.edu.ar:/usr/obj/usr/src/sys/OMEGA i386
>Description:
the authors removed a file (parameters.pdf) from the
distribution), which resulted in a broken port.
I also took the opportunity to bump PORTREVISION to the date of
the latest release of blast-2.0 (http://blast.wustl.edu/)
>How-To-Repeat:
>Fix:
--- blast.diff begins here ---
diff -ruN /usr/ports/biology/blast/Makefile blast/Makefile
--- /usr/ports/biology/blast/Makefile Fri Mar 18 10:01:07 2005
+++ blast/Makefile Wed Jan 11 12:15:30 2006
@@ -8,7 +8,7 @@
PORTNAME= wu-blast
PORTVERSION= 2.0
-PORTREVISION= 20050316
+PORTREVISION= 20060101
CATEGORIES= biology
MASTER_SITES= #
EXTRACT_SUFX= .tar.Z
@@ -30,7 +30,7 @@
PKGMESSAGE= ${WRKDIR}/pkg-message
PORTDOCS= COPYRIGHT FAQ-Indexing.html HISTORY LICENSE Memory.html \
- README.html parameters.html parameters.pdf
+ README.html parameters.html
BINS= blasta gb2fasta gt2fasta memfile nrdb pam patdb \
pir2fasta sp2fasta xdformat xdget
SCRIPTS= wu-blastall wu-formatdb
diff -ruN /usr/ports/biology/blast/distinfo blast/distinfo
--- /usr/ports/biology/blast/distinfo Fri Nov 19 14:27:44 2004
+++ blast/distinfo Wed Jan 11 10:43:35 2006
@@ -1,2 +1,4 @@
MD5 (blast2.freebsd-4.x-i686.tar.Z) = IGNORE
MD5 (blast2.freebsd-i686.tar.Z) = IGNORE
+SHA256 (blast2.freebsd-4.x-i686.tar.Z) = IGNORE
+SHA256 (blast2.freebsd-i686.tar.Z) = IGNORE
--- blast.diff ends here ---
>Release-Note:
>Audit-Trail:
>Unformatted:
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