ports/53845: [update] science/openbabel to 1.100.1

Fri Jun 27 16:20:21 UTC 2003

The following reply was made to PR ports/53845; it has been noted by GNATS.

From: Pav Lucistnik <pav at oook.cz>
To: FreeBSD-gnats-submit at freebsd.org
Cc:  
Subject: Re: ports/53845: [update] science/openbabel to 1.100.1
Date: Fri, 27 Jun 2003 18:10:48 +0200 (CEST)

 >Submitter-Id:	current-users
 >Originator:	Pav Lucistnik
 >Organization:	
 >Confidential:	no 
 >Synopsis:	Re: ports/53845: [update] science/openbabel to 1.100.1
 >Severity:	non-critical
 >Priority:	low
 >Category:	ports
 >Class:		update
 >Release:	FreeBSD 4.8-STABLE i386
 >Environment:
 System: FreeBSD pav.hide.vol.cz 4.8-STABLE FreeBSD 4.8-STABLE #1: Tue May 20 09:27:29 CEST 2003 root at pav.hide.vol.cz:/usr/obj/usr/src/sys/PAV i386

 >Description:
 Resend: install header files from subdirs. See bug #761644 on Openbabel website

 Update to 1.100.1, which now features shared library (I'll need it
 for new version of GChemPaint).

 Remove all files from files/, renaming of binary babel->openbabel is
 more elegantly done with --program-prefix=open :)

 gnomehack is there for correct placing of .pc file

 >How-To-Repeat:

 >Fix:

 diff -ruN /usr/ports/science/openbabel/Makefile openbabel/Makefile
 --- /usr/ports/science/openbabel/Makefile	Mon Apr  7 09:06:07 2003
 +++ openbabel/Makefile	Fri Jun 27 17:55:35 2003
 @@ -7,7 +7,7 @@
  #

  PORTNAME=	openbabel
 -PORTVERSION=	1.100.0
 +PORTVERSION=	1.100.1
  CATEGORIES=	science
  MASTER_SITES=	${MASTER_SITE_SOURCEFORGE}
  MASTER_SITE_SUBDIR=	${PORTNAME}
 @@ -15,8 +15,15 @@
  MAINTAINER=	ports at FreeBSD.org
  COMMENT=	Chemistry file translation program

 -GNU_CONFIGURE=	yes
 +USE_LIBTOOL=	yes
 +INSTALLS_SHLIB=	yes
 +CONFIGURE_ARGS=	--enable-shared --disable-static --program-prefix=open
 +USE_GNOME=	gnomehack

  MAN1=	openbabel.1
 +
 +post-install:
 +	${MKDIR} ${PREFIX}/include/openbabel/math
 +	${INSTALL_DATA} ${WRKSRC}/src/math/*.h ${PREFIX}/include/openbabel/math

  .include <bsd.port.mk>
 diff -ruN /usr/ports/science/openbabel/distinfo openbabel/distinfo
 --- /usr/ports/science/openbabel/distinfo	Sun Jan  5 18:04:59 2003
 +++ openbabel/distinfo	Fri Jun 27 14:42:57 2003
 @@ -1 +1 @@
 -MD5 (openbabel-1.100.0.tar.gz) = 6001013ebb0c4eca28e56a5d777bea39
 +MD5 (openbabel-1.100.1.tar.gz) = 06ed9032ebaece0883420bd403c45215
 diff -ruN /usr/ports/science/openbabel/files/patch-Makefile.in openbabel/files/patch-Makefile.in
 --- /usr/ports/science/openbabel/files/patch-Makefile.in	Sat Apr  5 10:11:47 2003
 +++ openbabel/files/patch-Makefile.in	Thu Jan  1 01:00:00 1970
 @@ -1,11 +0,0 @@
 ---- Makefile.in.orig	Fri Apr  4 23:51:37 2003
 -+++ Makefile.in	Fri Apr  4 23:52:01 2003
 -@@ -53,7 +53,7 @@
 - install:	all
 - 		(cd src; $(MAKE) $(MFLAGS) install)
 - 		$(MKDIRS) $(DESTDIR)$(mandir)
 --		$(INSTALL) $(top_srcdir)/doc/babel.1 $(DESTDIR)$(mandir)
 -+		$(INSTALL) $(top_srcdir)/doc/babel.1 $(DESTDIR)$(mandir)/openbabel.1
 - 
 - 
 - dist:		distclean
 diff -ruN /usr/ports/science/openbabel/files/patch-src::Makefile.in openbabel/files/patch-src::Makefile.in
 --- /usr/ports/science/openbabel/files/patch-src::Makefile.in	Sat Apr  5 10:11:47 2003
 +++ openbabel/files/patch-src::Makefile.in	Thu Jan  1 01:00:00 1970
 @@ -1,11 +0,0 @@
 ---- src/Makefile.in.orig	Fri Apr  4 23:52:42 2003
 -+++ src/Makefile.in	Fri Apr  4 23:52:59 2003
 -@@ -91,7 +91,7 @@
 - 
 - install:	$(PROGRAM)
 - 		$(MKDIRS) $(DESTDIR)$(bindir)
 --		$(INSTALL) $(PROGRAM) $(DESTDIR)$(bindir)
 -+		$(INSTALL) $(PROGRAM) $(DESTDIR)$(bindir)/openbabel
 - 		$(MKDIRS) $(DESTDIR)$(pkgdatadir)
 - 		(cd $(srcdir); $(INSTALL) -m644 $(DATAFILES) $(DESTDIR)$(pkgdatadir))
 - 
 diff -ruN /usr/ports/science/openbabel/pkg-plist openbabel/pkg-plist
 --- /usr/ports/science/openbabel/pkg-plist	Mon Apr  7 09:06:07 2003
 +++ openbabel/pkg-plist	Fri Jun 27 17:56:15 2003
 @@ -1,9 +1,53 @@
  bin/openbabel
 +include/openbabel/aromatic.h
 +include/openbabel/atomtyp.h
 +include/openbabel/base.h
 +include/openbabel/binary.h
 +include/openbabel/bitvec.h
 +include/openbabel/bondtyp.h
 +include/openbabel/bondtyper.h
 +include/openbabel/chains.h
 +include/openbabel/chiral.h
 +include/openbabel/data.h
 +include/openbabel/element.h
 +include/openbabel/extable.h
 +include/openbabel/fileformat.h
 +include/openbabel/generic.h
 +include/openbabel/grid.h
 +include/openbabel/isotope.h
 +include/openbabel/math/matrix3x3.h
 +include/openbabel/math/vector3.h
 +include/openbabel/matrix.h
 +include/openbabel/mol.h
 +include/openbabel/molchrg.h
 +include/openbabel/molvector.h
 +include/openbabel/oberror.h
 +include/openbabel/obifstream.h
 +include/openbabel/obutil.h
 +include/openbabel/parsmart.h
 +include/openbabel/patty.h
 +include/openbabel/phmodel.h
 +include/openbabel/phmodeldata.h
 +include/openbabel/resdata.h
 +include/openbabel/ring.h
 +include/openbabel/rotor.h
 +include/openbabel/smi.h
 +include/openbabel/typer.h
 +include/openbabel/types.h
 +lib/libopenbabel.la
 +lib/libopenbabel.so
 +lib/libopenbabel.so.0
 +libdata/pkgconfig/openbabel.pc
  share/openbabel/aromatic.txt
  share/openbabel/atomtyp.txt
 +share/openbabel/bondtyp.txt
  share/openbabel/element.txt
  share/openbabel/extable.txt
 +share/openbabel/isotope.txt
 +share/openbabel/isotope-small.txt
  share/openbabel/phmodel.txt
  share/openbabel/resdata.txt
  share/openbabel/types.txt
 + at dirrm include/openbabel/math
 + at dirrm include/openbabel
  @dirrm share/openbabel