[package - head-i386-default][science/medit] Failed for medit-2012.02.05_3 in build

pkg-fallout at FreeBSD.org pkg-fallout at FreeBSD.org
Sun Mar 31 00:54:34 UTC 2019


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer:     thierry at FreeBSD.org
Last committer: rezny at FreeBSD.org
Ident:          $FreeBSD: head/science/medit/Makefile 441503 2017-05-23 05:03:14Z rezny $
Log URL:        http://beefy11.nyi.freebsd.org/data/head-i386-default/p497233_s345723/logs/medit-2012.02.05_3.log
Build URL:      http://beefy11.nyi.freebsd.org/build.html?mastername=head-i386-default&build=p497233_s345723
Log:

=>> Building science/medit
build started at Sun Mar 31 00:54:00 UTC 2019
port directory: /usr/ports/science/medit
package name: medit-2012.02.05_3
building for: FreeBSD head-i386-default-job-20 13.0-CURRENT FreeBSD 13.0-CURRENT 1300017 i386
maintained by: thierry at FreeBSD.org
Makefile ident:      $FreeBSD: head/science/medit/Makefile 441503 2017-05-23 05:03:14Z rezny $
Poudriere version: 3.2.8-3-g02cc9753
Host OSVERSION: 1300009
Jail OSVERSION: 1300017
Job Id: 20




!!! Jail is newer than host. (Jail: 1300017, Host: 1300009) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



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===> The following configuration options are available for medit-2012.02.05_3:
     EXAMPLES=on: Build and/or install examples
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
thierry at FreeBSD.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
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=======================<phase: check-sanity   >============================
===>  License None accepted by the user
===========================================================================
=======================<phase: pkg-depends    >============================
===>   medit-2012.02.05_3 depends on file: /usr/local/sbin/pkg - not found
===>   Installing existing package /packages/All/pkg-1.10.5_5.txz
[head-i386-default-job-20] Installing pkg-1.10.5_5...
[head-i386-default-job-20] Extracting pkg-1.10.5_5: .......... done
===>   medit-2012.02.05_3 depends on file: /usr/local/sbin/pkg - found
===>   Returning to build of medit-2012.02.05_3
===========================================================================
=======================<phase: fetch-depends  >============================
===========================================================================
=======================<phase: fetch          >============================
===>  License None accepted by the user
===> Fetching all distfiles required by medit-2012.02.05_3 for building
===========================================================================
=======================<phase: checksum       >============================
===>  License None accepted by the user
===> Fetching all distfiles required by medit-2012.02.05_3 for building
=> SHA256 Checksum OK for medit.2012.02.05.tgz.
=> SHA256 Checksum OK for library.2012.02.05.tgz.
=> SHA256 Checksum OK for meshes.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract        >============================
===>  License None accepted by the user
===> Fetching all distfiles required by medit-2012.02.05_3 for building
===>  Extracting for medit-2012.02.05_3
=> SHA256 Checksum OK for medit.2012.02.05.tgz.
=> SHA256 Checksum OK for library.2012.02.05.tgz.
=> SHA256 Checksum OK for meshes.tar.gz.
<snip>
cc -c -O2 -pipe  -fstack-protector -fno-strict-aliasing  -I. -I/wrkdirs/usr/ports/science/medit/work/medit-2012.02.05_3/sources -I/usr/local/include sources/geometry.c -o objects/FreeBSD/geometry.o
cc -c -O2 -pipe  -fstack-protector -fno-strict-aliasing  -I. -I/wrkdirs/usr/ports/science/medit/work/medit-2012.02.05_3/sources -I/usr/local/include sources/medit.c -o objects/FreeBSD/medit.o
sources/medit.c:45:54: warning: implicit declaration of function 'gttime' is invalid in C99 [-Wimplicit-function-declaration]
  fprintf(stdout,"\n Total running seconds:  %.2f\n",gttime(ctim[0]));
                                                     ^
sources/medit.c:45:54: warning: format specifies type 'double' but the argument has type 'int' [-Wformat]
  fprintf(stdout,"\n Total running seconds:  %.2f\n",gttime(ctim[0]));
                                             ~~~~    ^~~~~~~~~~~~~~~
                                             %.2d
2 warnings generated.
cc -c -O2 -pipe  -fstack-protector -fno-strict-aliasing  -I. -I/wrkdirs/usr/ports/science/medit/work/medit-2012.02.05_3/sources -I/usr/local/include sources/view.c -o objects/FreeBSD/view.o
cc -c -O2 -pipe  -fstack-protector -fno-strict-aliasing  -I. -I/wrkdirs/usr/ports/science/medit/work/medit-2012.02.05_3/sources -I/usr/local/include sources/inmsh2.c -o objects/FreeBSD/inmsh2.o
sources/inmsh2.c:89:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses]
    if ( ptr = strpbrk(sx,"dD") )
         ~~~~^~~~~~~~~~~~~~~~~~
sources/inmsh2.c:89:14: note: place parentheses around the assignment to silence this warning
    if ( ptr = strpbrk(sx,"dD") )
             ^
         (                     )
sources/inmsh2.c:89:14: note: use '==' to turn this assignment into an equality comparison
    if ( ptr = strpbrk(sx,"dD") )
             ^
             ==
sources/inmsh2.c:91:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses]
    if ( ptr = strpbrk(sy,"dD") )
         ~~~~^~~~~~~~~~~~~~~~~~
sources/inmsh2.c:91:14: note: place parentheses around the assignment to silence this warning
    if ( ptr = strpbrk(sy,"dD") )
             ^
         (                     )
sources/inmsh2.c:91:14: note: use '==' to turn this assignment into an equality comparison
    if ( ptr = strpbrk(sy,"dD") )
             ^
             ==
sources/inmsh2.c:93:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses]
    if ( ptr = strpbrk(sz,"dD") )
         ~~~~^~~~~~~~~~~~~~~~~~
sources/inmsh2.c:93:14: note: place parentheses around the assignment to silence this warning
    if ( ptr = strpbrk(sz,"dD") )
             ^
         (                     )
sources/inmsh2.c:93:14: note: use '==' to turn this assignment into an equality comparison
    if ( ptr = strpbrk(sz,"dD") )
             ^
             ==
sources/inmsh2.c:95:20: warning: format specifies type 'float *' but the argument has type 'double *' [-Wformat]
    sscanf(sx,"%f",&ppt->c[0]);
               ~~  ^~~~~~~~~~
               %lf
sources/inmsh2.c:96:20: warning: format specifies type 'float *' but the argument has type 'double *' [-Wformat]
    sscanf(sy,"%f",&ppt->c[1]);
               ~~  ^~~~~~~~~~
               %lf
sources/inmsh2.c:97:20: warning: format specifies type 'float *' but the argument has type 'double *' [-Wformat]
    sscanf(sz,"%f",&ppt->c[2]);
               ~~  ^~~~~~~~~~
               %lf
sources/inmsh2.c:147:18: warning: using floating point absolute value function 'fabs' when argument is of integer type [-Wabsolute-value]
      pt1->ref = fabs(ref);
                 ^
sources/inmsh2.c:147:18: note: use function 'abs' instead
      pt1->ref = fabs(ref);
                 ^~~~
                 abs
sources/inmsh2.c:169:18: warning: using floating point absolute value function 'fabs' when argument is of integer type [-Wabsolute-value]
      pq1->ref = fabs(ref);
                 ^
sources/inmsh2.c:169:18: note: use function 'abs' instead
      pq1->ref = fabs(ref);
                 ^~~~
                 abs
8 warnings generated.
cc -c -O2 -pipe  -fstack-protector -fno-strict-aliasing  -I. -I/wrkdirs/usr/ports/science/medit/work/medit-2012.02.05_3/sources -I/usr/local/include sources/libmesh3.c -o objects/FreeBSD/libmesh3.o
sources/libmesh3.c:914:27: warning: using the result of an assignment as a condition without parentheses [-Wparentheses]
                if(mesh->sol_headers[i] = malloc((nbsol+2) * sizeof(int)))
                   ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
sources/libmesh3.c:914:27: note: place parentheses around the assignment to silence this warning
                if(mesh->sol_headers[i] = malloc((nbsol+2) * sizeof(int)))
                                        ^
                   (                                                     )
sources/libmesh3.c:914:27: note: use '==' to turn this assignment into an equality comparison
                if(mesh->sol_headers[i] = malloc((nbsol+2) * sizeof(int)))
                                        ^
                                        ==
1 warning generated.
cc -c -O2 -pipe  -fstack-protector -fno-strict-aliasing  -I. -I/wrkdirs/usr/ports/science/medit/work/medit-2012.02.05_3/sources -I/usr/local/include sources/clip.c -o objects/FreeBSD/clip.o
cc -c -O2 -pipe  -fstack-protector -fno-strict-aliasing  -I. -I/wrkdirs/usr/ports/science/medit/work/medit-2012.02.05_3/sources -I/usr/local/include sources/inout.c -o objects/FreeBSD/inout.o
sources/inout.c:756:18: warning: implicit declaration of function 'eigen2' is invalid in C99 [-Wimplicit-function-declaration]
          iord = eigen2(m,lambda,vp);
                 ^
1 warning generated.
cc -c -O2 -pipe  -fstack-protector -fno-strict-aliasing  -I. -I/wrkdirs/usr/ports/science/medit/work/medit-2012.02.05_3/sources -I/usr/local/include sources/psfile.c -o objects/FreeBSD/psfile.o
cc -c -O2 -pipe  -fstack-protector -fno-strict-aliasing  -I. -I/wrkdirs/usr/ports/science/medit/work/medit-2012.02.05_3/sources -I/usr/local/include sources/tiles.c -o objects/FreeBSD/tiles.o
cc -c -O2 -pipe  -fstack-protector -fno-strict-aliasing  -I. -I/wrkdirs/usr/ports/science/medit/work/medit-2012.02.05_3/sources -I/usr/local/include sources/material.c -o objects/FreeBSD/material.o
cc -c -O2 -pipe  -fstack-protector -fno-strict-aliasing  -I. -I/wrkdirs/usr/ports/science/medit/work/medit-2012.02.05_3/sources -I/usr/local/include sources/transform.c -o objects/FreeBSD/transform.o
cc -c -O2 -pipe  -fstack-protector -fno-strict-aliasing  -I. -I/wrkdirs/usr/ports/science/medit/work/medit-2012.02.05_3/sources -I/usr/local/include sources/vector.c -o objects/FreeBSD/vector.o
cc -c -O2 -pipe  -fstack-protector -fno-strict-aliasing  -I. -I/wrkdirs/usr/ports/science/medit/work/medit-2012.02.05_3/sources -I/usr/local/include sources/mesh.c -o objects/FreeBSD/mesh.o
cc -c -O2 -pipe  -fstack-protector -fno-strict-aliasing  -I. -I/wrkdirs/usr/ports/science/medit/work/medit-2012.02.05_3/sources -I/usr/local/include sources/scene.c -o objects/FreeBSD/scene.o
sources/scene.c:361:5: warning: implicit declaration of function 'displayParticle' is invalid in C99 [-Wimplicit-function-declaration]
    displayParticle(sc,mesh);
    ^
sources/scene.c:793:18: warning: address of array 'sc->par.sunpos' will always evaluate to 'true' [-Wpointer-bool-conversion]
    if ( sc->par.sunpos )
    ~~   ~~~~~~~~^~~~~~
2 warnings generated.
cc -c -O2 -pipe  -fstack-protector -fno-strict-aliasing  -I. -I/wrkdirs/usr/ports/science/medit/work/medit-2012.02.05_3/sources -I/usr/local/include sources/dlists.c -o objects/FreeBSD/dlists.o
cc -c -O2 -pipe  -fstack-protector -fno-strict-aliasing  -I. -I/wrkdirs/usr/ports/science/medit/work/medit-2012.02.05_3/sources -I/usr/local/include sources/camera.c -o objects/FreeBSD/camera.o
cc -c -O2 -pipe  -fstack-protector -fno-strict-aliasing  -I. -I/wrkdirs/usr/ports/science/medit/work/medit-2012.02.05_3/sources -I/usr/local/include sources/eigenv.c -o objects/FreeBSD/eigenv.o
cc -c -O2 -pipe  -fstack-protector -fno-strict-aliasing  -I. -I/wrkdirs/usr/ports/science/medit/work/medit-2012.02.05_3/sources -I/usr/local/include sources/menus.c -o objects/FreeBSD/menus.o
sources/menus.c:10:9: warning: 'MAX_LST' macro redefined [-Wmacro-redefined]
#define MAX_LST   128
        ^
/wrkdirs/usr/ports/science/medit/work/medit-2012.02.05_3/sources/grafic.h:72:9: note: previous definition is here
#define MAX_LST    1024
        ^
sources/menus.c:101:19: warning: expression which evaluates to zero treated as a null pointer constant of type 'GLuint *' (aka 'unsigned int *') [-Wnon-literal-null-conversion]
      sc->slist = (GLuint)0;
                  ^~~~~~~~~
2 warnings generated.
cc -c -O2 -pipe  -fstack-protector -fno-strict-aliasing  -I. -I/wrkdirs/usr/ports/science/medit/work/medit-2012.02.05_3/sources -I/usr/local/include sources/animat.c -o objects/FreeBSD/animat.o
cc -c -O2 -pipe  -fstack-protector -fno-strict-aliasing  -I. -I/wrkdirs/usr/ports/science/medit/work/medit-2012.02.05_3/sources -I/usr/local/include sources/path.c -o objects/FreeBSD/path.o
cc -c -O2 -pipe  -fstack-protector -fno-strict-aliasing  -I. -I/wrkdirs/usr/ports/science/medit/work/medit-2012.02.05_3/sources -I/usr/local/include sources/hash.c -o objects/FreeBSD/hash.o
cc -c -O2 -pipe  -fstack-protector -fno-strict-aliasing  -I. -I/wrkdirs/usr/ports/science/medit/work/medit-2012.02.05_3/sources -I/usr/local/include sources/stream.c -o objects/FreeBSD/stream.o
sources/stream.c:6:9: warning: 'MAX_CPT' macro redefined [-Wmacro-redefined]
#define MAX_CPT   50000
        ^
/wrkdirs/usr/ports/science/medit/work/medit-2012.02.05_3/sources/grafic.h:73:9: note: previous definition is here
#define MAX_CPT    5000
        ^
sources/stream.c:1128:38: warning: format specifies type 'double' but the argument has type 'clock_t' (aka 'unsigned long') [-Wformat]
      fprintf(stdout," %6.2f sec.\n",ct);
                       ~~~~~         ^~
                       %6.2lu
sources/stream.c:1202:36: warning: format specifies type 'double' but the argument has type 'clock_t' (aka 'unsigned long') [-Wformat]
    fprintf(stdout," %6.2f sec.\n",ct);
                     ~~~~~         ^~
                     %6.2lu
sources/stream.c:1337:38: warning: implicit declaration of function 'gttime' is invalid in C99 [-Wimplicit-function-declaration]
      fprintf(stdout," %6.2f sec.\n",gttime(tt));
                                     ^
sources/stream.c:1337:38: warning: format specifies type 'double' but the argument has type 'int' [-Wformat]
      fprintf(stdout," %6.2f sec.\n",gttime(tt));
                       ~~~~~         ^~~~~~~~~~
                       %6.2d
sources/stream.c:1404:38: warning: implicit declaration of function 'gttime' is invalid in C99 [-Wimplicit-function-declaration]
      fprintf(stdout," %6.2f sec.\n",gttime(tt));
                                     ^
sources/stream.c:1404:38: warning: format specifies type 'double' but the argument has type 'int' [-Wformat]
      fprintf(stdout," %6.2f sec.\n",gttime(tt));
                       ~~~~~         ^~~~~~~~~~
                       %6.2d
sources/stream.c:1419:36: warning: implicit declaration of function 'gttime' is invalid in C99 [-Wimplicit-function-declaration]
    fprintf(stdout," %6.2f sec.\n",gttime(tt));
                                   ^
sources/stream.c:1419:36: warning: format specifies type 'double' but the argument has type 'int' [-Wformat]
    fprintf(stdout," %6.2f sec.\n",gttime(tt));
                     ~~~~~         ^~~~~~~~~~
                     %6.2d
sources/stream.c:1578:36: warning: format specifies type 'double' but the argument has type 'clock_t' (aka 'unsigned long') [-Wformat]
    fprintf(stdout," %6.2f sec.\n",ct);
                     ~~~~~         ^~
                     %6.2lu
sources/stream.c:1649:34: warning: format specifies type 'double' but the argument has type 'clock_t' (aka 'unsigned long') [-Wformat]
  fprintf(stdout," %6.2f sec.\n",ct);
                   ~~~~~         ^~
                   %6.2lu
11 warnings generated.
cc -c -O2 -pipe  -fstack-protector -fno-strict-aliasing  -I. -I/wrkdirs/usr/ports/science/medit/work/medit-2012.02.05_3/sources -I/usr/local/include sources/cenrad.c -o objects/FreeBSD/cenrad.o
cc -c -O2 -pipe  -fstack-protector -fno-strict-aliasing  -I. -I/wrkdirs/usr/ports/science/medit/work/medit-2012.02.05_3/sources -I/usr/local/include sources/gisfil.c -o objects/FreeBSD/gisfil.o
cc -c -O2 -pipe  -fstack-protector -fno-strict-aliasing  -I. -I/wrkdirs/usr/ports/science/medit/work/medit-2012.02.05_3/sources -I/usr/local/include sources/image.c -o objects/FreeBSD/image.o
cc -c -O2 -pipe  -fstack-protector -fno-strict-aliasing  -I. -I/wrkdirs/usr/ports/science/medit/work/medit-2012.02.05_3/sources -I/usr/local/include sources/zaldy2.c -o objects/FreeBSD/zaldy2.o
cc -c -O2 -pipe  -fstack-protector -fno-strict-aliasing  -I. -I/wrkdirs/usr/ports/science/medit/work/medit-2012.02.05_3/sources -I/usr/local/include sources/sftcpy.c -o objects/FreeBSD/sftcpy.o
cc -c -O2 -pipe  -fstack-protector -fno-strict-aliasing  -I. -I/wrkdirs/usr/ports/science/medit/work/medit-2012.02.05_3/sources -I/usr/local/include sources/gttime.c -o objects/FreeBSD/gttime.o
cc -c -O2 -pipe  -fstack-protector -fno-strict-aliasing  -I. -I/wrkdirs/usr/ports/science/medit/work/medit-2012.02.05_3/sources -I/usr/local/include sources/ilists.c -o objects/FreeBSD/ilists.o
sources/ilists.c:556:21: warning: expression which evaluates to zero treated as a null pointer constant of type 'char *' [-Wnon-literal-null-conversion]
  if ( ptr )  ptr = '\0';
                    ^~~~
1 warning generated.
echo "#define COMPIL " '"' `date` '"' > sources/compil.date
cc -c -O2 -pipe  -fstack-protector -fno-strict-aliasing  -I. -I/wrkdirs/usr/ports/science/medit/work/medit-2012.02.05_3/sources -I/usr/local/include sources/medit.c -o objects/FreeBSD/medit.o
sources/medit.c:45:54: warning: implicit declaration of function 'gttime' is invalid in C99 [-Wimplicit-function-declaration]
  fprintf(stdout,"\n Total running seconds:  %.2f\n",gttime(ctim[0]));
                                                     ^
sources/medit.c:45:54: warning: format specifies type 'double' but the argument has type 'int' [-Wformat]
  fprintf(stdout,"\n Total running seconds:  %.2f\n",gttime(ctim[0]));
                                             ~~~~    ^~~~~~~~~~~~~~~
                                             %.2d
2 warnings generated.
cc -o medit objects/FreeBSD/scissor.o objects/FreeBSD/listnum.o objects/FreeBSD/picking.o objects/FreeBSD/ellipse.o objects/FreeBSD/particle.o objects/FreeBSD/status.o objects/FreeBSD/parsar.o objects/FreeBSD/parsop.o objects/FreeBSD/clipvol.o objects/FreeBSD/mlists.o objects/FreeBSD/inout.o objects/FreeBSD/cube.o objects/FreeBSD/libmesh5.o objects/FreeBSD/critip.o objects/FreeBSD/geometry.o objects/FreeBSD/normal.o objects/FreeBSD/medit.o objects/FreeBSD/chrono.o objects/FreeBSD/zaldy2.o objects/FreeBSD/zaldy1.o objects/FreeBSD/tiles.o objects/FreeBSD/libmesh3.o objects/FreeBSD/keyboard.o objects/FreeBSD/mesh.o objects/FreeBSD/hash.o objects/FreeBSD/eigenv.o objects/FreeBSD/animat.o objects/FreeBSD/util.o objects/FreeBSD/path.o objects/FreeBSD/cenrad.o objects/FreeBSD/image.o objects/FreeBSD/lplib3.o objects/FreeBSD/sftcpy.o objects/FreeBSD/morphing.o objects/FreeBSD/stream.o objects/FreeBSD/param.o objects/FreeBSD/memory.o objects/FreeBSD/material.o objects/FreeBSD/bbfile.o objects
 /FreeBSD/persp.o objects/FreeBSD/view.o objects/FreeBSD/clip.o objects/FreeBSD/gttime.o objects/FreeBSD/psfile.o objects/FreeBSD/scene.o objects/FreeBSD/items.o objects/FreeBSD/transform.o objects/FreeBSD/inmsh2.o objects/FreeBSD/dlists.o objects/FreeBSD/menus.o objects/FreeBSD/mouse.o objects/FreeBSD/camera.o objects/FreeBSD/vector.o objects/FreeBSD/gisfil.o objects/FreeBSD/ilists.o  -fstack-protector  -lglut -lGL -lGLU -L/usr/local/lib -lXmu -lXext -lX11 -lpmc -pthread -lm
ld: error: /usr/lib/libpmc.so: undefined reference to std::__1::__basic_string_common<true>::__throw_length_error() const
ld: error: /usr/lib/libpmc.so: undefined reference to std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> >::append(char const*, unsigned int)
cc: error: linker command failed with exit code 1 (use -v to see invocation)
gmake[2]: *** [Makefile.arch:25: medit] Error 1
gmake[2]: Leaving directory '/wrkdirs/usr/ports/science/medit/work/medit-2012.02.05_3'
gmake[1]: *** [makefile:59: FreeBSD] Error 2
gmake[1]: Leaving directory '/wrkdirs/usr/ports/science/medit/work/medit-2012.02.05_3'
*** Error code 1

Stop.
make: stopped in /usr/ports/science/medit


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