[package - head-armv7-default][science/quantum-espresso] Failed for quantum-espresso-6.3_2 in configure
pkg-fallout at FreeBSD.org
pkg-fallout at FreeBSD.org
Wed Aug 22 09:46:45 UTC 2018
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.
Maintainer: yuri at FreeBSD.org
Last committer: gerald at FreeBSD.org
Ident: $FreeBSD: head/science/quantum-espresso/Makefile 475857 2018-07-29 22:18:44Z gerald $
Log URL: http://beefy16.nyi.freebsd.org/data/head-armv7-default/p477551_s338037/logs/quantum-espresso-6.3_2.log
Build URL: http://beefy16.nyi.freebsd.org/build.html?mastername=head-armv7-default&build=p477551_s338037
Log:
=>> Building science/quantum-espresso
build started at Wed Aug 22 09:46:06 UTC 2018
port directory: /usr/ports/science/quantum-espresso
package name: quantum-espresso-6.3_2
building for: FreeBSD head-armv7-default-job-20 12.0-ALPHA2 FreeBSD 12.0-ALPHA2 1200078 arm
maintained by: yuri at FreeBSD.org
Makefile ident: $FreeBSD: head/science/quantum-espresso/Makefile 475857 2018-07-29 22:18:44Z gerald $
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Host OSVERSION: 1200069
Jail OSVERSION: 1200078
Job Id: 20
!!! Jail is newer than host. (Jail: 1200078, Host: 1200069) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!
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=======================<phase: check-sanity >============================
===> License GPLv2 accepted by the user
===========================================================================
=======================<phase: pkg-depends >============================
===> quantum-espresso-6.3_2 depends on file: /usr/local/sbin/pkg - not found
===> Installing existing package /packages/All/pkg-1.10.5_1.txz
[head-armv7-default-job-20] Installing pkg-1.10.5_1...
[head-armv7-default-job-20] Extracting pkg-1.10.5_1: .......... done
===> quantum-espresso-6.3_2 depends on file: /usr/local/sbin/pkg - found
===> Returning to build of quantum-espresso-6.3_2
===========================================================================
=======================<phase: fetch-depends >============================
===========================================================================
=======================<phase: fetch >============================
===> License GPLv2 accepted by the user
<snip>
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract >============================
===> License GPLv2 accepted by the user
===> Fetching all distfiles required by quantum-espresso-6.3_2 for building
===> Extracting for quantum-espresso-6.3_2
=> SHA256 Checksum OK for quantum-espresso/Al.pbe-n-rrkjus_psl.0.1.UPF.
=> SHA256 Checksum OK for quantum-espresso/Al.pbe-n-van.UPF.
=> SHA256 Checksum OK for quantum-espresso/Al.pbe-rrkj.UPF.
=> SHA256 Checksum OK for quantum-espresso/Al.pz-vbc.UPF.
=> SHA256 Checksum OK for quantum-espresso/As.pz-bhs.UPF.
=> SHA256 Checksum OK for quantum-espresso/Au.rel-pz-kjpaw.UPF.
=> SHA256 Checksum OK for quantum-espresso/B.pbe-n-kjpaw_psl.0.1.UPF.
=> SHA256 Checksum OK for quantum-espresso/B.pbe-n-kjpaw_psl.0.1.upf.
=> SHA256 Checksum OK for quantum-espresso/B.pz-vbc.UPF.
=> SHA256 Checksum OK for quantum-espresso/C.pbe-hgh.UPF.
=> SHA256 Checksum OK for quantum-espresso/C.pbe-n-rrkjus_psl.0.1.UPF.
=> SHA256 Checksum OK for quantum-espresso/C.pbe-rrkjus.UPF.
=> SHA256 Checksum OK for quantum-espresso/C.pz-kjpaw.UPF.
=> SHA256 Checksum OK for quantum-espresso/C.pz-rrkjus.UPF.
=> SHA256 Checksum OK for quantum-espresso/C.pz-van_ak.UPF.
=> SHA256 Checksum OK for quantum-espresso/C.pz-vbc.UPF.
=> SHA256 Checksum OK for quantum-espresso/C.tpss-mt.UPF.
=> SHA256 Checksum OK for quantum-espresso/Co.pbe-nd-rrkjus.UPF.
=> SHA256 Checksum OK for quantum-espresso/Cu.pbe-kjpaw.UPF.
=> SHA256 Checksum OK for quantum-espresso/Cu.pz-d-rrkjus.UPF.
=> SHA256 Checksum OK for quantum-espresso/Fe.pz-nd-rrkjus.UPF.
=> SHA256 Checksum OK for quantum-espresso/Fe.rel-pbe-kjpaw.UPF.
=> SHA256 Checksum OK for quantum-espresso/Fe.rel-pbe-spn-rrkjus_psl.0.2.1.UPF.
=> SHA256 Checksum OK for quantum-espresso/H.blyp-vbc.UPF.
=> SHA256 Checksum OK for quantum-espresso/H.pbe-kjpaw.UPF.
=> SHA256 Checksum OK for quantum-espresso/H.pbe-rrkjus.UPF.
=> SHA256 Checksum OK for quantum-espresso/H.pbe-van_ak.UPF.
=> SHA256 Checksum OK for quantum-espresso/H.pz-kjpaw.UPF.
=> SHA256 Checksum OK for quantum-espresso/H.pz-vbc.UPF.
=> SHA256 Checksum OK for quantum-espresso/H.tpss-mt.UPF.
=> SHA256 Checksum OK for quantum-espresso/Mg.pbe-n-kjpaw_psl.0.3.0.upf.
=> SHA256 Checksum OK for quantum-espresso/Mg.pz-n-vbc.UPF.
=> SHA256 Checksum OK for quantum-espresso/N.blyp-mt.UPF.
=> SHA256 Checksum OK for quantum-espresso/N.pbe-kjpaw.UPF.
=> SHA256 Checksum OK for quantum-espresso/N.pbe-n-kjpaw_psl.0.1.UPF.
=> SHA256 Checksum OK for quantum-espresso/N.pz-vbc.UPF.
=> SHA256 Checksum OK for quantum-espresso/Ni.pbe-nd-rrkjus.UPF.
=> SHA256 Checksum OK for quantum-espresso/Ni.pz-nd-rrkjus.UPF.
=> SHA256 Checksum OK for quantum-espresso/O.blyp-mt.UPF.
=> SHA256 Checksum OK for quantum-espresso/O.pbe-hgh.UPF.
=> SHA256 Checksum OK for quantum-espresso/O.pbe-kjpaw.UPF.
=> SHA256 Checksum OK for quantum-espresso/O.pbe-rrkjus.UPF.
=> SHA256 Checksum OK for quantum-espresso/O.pbe-van_ak.UPF.
=> SHA256 Checksum OK for quantum-espresso/O.pz-rrkjus.UPF.
=> SHA256 Checksum OK for quantum-espresso/O.pz-van_ak.UPF.
=> SHA256 Checksum OK for quantum-espresso/Pb.pz-d-van.UPF.
=> SHA256 Checksum OK for quantum-espresso/Pt.rel-pz-n-rrkjus.UPF.
=> SHA256 Checksum OK for quantum-espresso/Si.pbe-rrkj.UPF.
=> SHA256 Checksum OK for quantum-espresso/Si.pz-vbc.UPF.
=> SHA256 Checksum OK for quantum-espresso/Ti.pz-sp-van_ak.UPF.
=> SHA256 Checksum OK for quantum-espresso/Zn.pbe-d-hgh.UPF.
=> SHA256 Checksum OK for quantum-espresso/QEF-q-e-qe-6.3_GH0.tar.gz.
===========================================================================
=======================<phase: patch-depends >============================
===========================================================================
=======================<phase: patch >============================
===> Patching for quantum-espresso-6.3_2
===> Applying FreeBSD patches for quantum-espresso-6.3_2
===========================================================================
=======================<phase: build-depends >============================
===> quantum-espresso-6.3_2 depends on package: fox-xml>0 - not found
===> Installing existing package /packages/All/fox-xml-4.1.2.91_1.txz
[head-armv7-default-job-20] Installing fox-xml-4.1.2.91_1...
[head-armv7-default-job-20] `-- Installing gcc7-7.3.0_5...
[head-armv7-default-job-20] | `-- Installing binutils-2.30_4,1...
[head-armv7-default-job-20] | | `-- Installing gettext-runtime-0.19.8.1_1...
[head-armv7-default-job-20] | | `-- Installing indexinfo-0.3.1...
[head-armv7-default-job-20] | | `-- Extracting indexinfo-0.3.1: .... done
[head-armv7-default-job-20] | | `-- Extracting gettext-runtime-0.19.8.1_1: .......... done
[head-armv7-default-job-20] | `-- Extracting binutils-2.30_4,1: .......... done
[head-armv7-default-job-20] | `-- Installing gmp-6.1.2...
[head-armv7-default-job-20] | `-- Extracting gmp-6.1.2: .......... done
[head-armv7-default-job-20] | `-- Installing mpc-1.1.0_1...
[head-armv7-default-job-20] | | `-- Installing mpfr-4.0.1...
[head-armv7-default-job-20] | | `-- Extracting mpfr-4.0.1: .......... done
[head-armv7-default-job-20] | `-- Extracting mpc-1.1.0_1: ......... done
[head-armv7-default-job-20] `-- Extracting gcc7-7.3.0_5: .......... done
[head-armv7-default-job-20] Extracting fox-xml-4.1.2.91_1: .......... done
Message from gcc7-7.3.0_5:
To ensure binaries built with this toolchain find appropriate versions
of the necessary run-time libraries, you may want to link using
-Wl,-rpath=/usr/local/lib/gcc7
For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens
transparently.
===> quantum-espresso-6.3_2 depends on package: fox-xml>0 - found
===> Returning to build of quantum-espresso-6.3_2
===> quantum-espresso-6.3_2 depends on executable: bash - not found
===> Installing existing package /packages/All/bash-4.4.23.txz
[head-armv7-default-job-20] Installing bash-4.4.23...
[head-armv7-default-job-20] Extracting bash-4.4.23: .......... done
===> quantum-espresso-6.3_2 depends on executable: bash - found
===> Returning to build of quantum-espresso-6.3_2
===> quantum-espresso-6.3_2 depends on executable: gfortran7 - found
===> quantum-espresso-6.3_2 depends on executable: gmake - not found
===> Installing existing package /packages/All/gmake-4.2.1_2.txz
[head-armv7-default-job-20] Installing gmake-4.2.1_2...
[head-armv7-default-job-20] Extracting gmake-4.2.1_2: .......... done
===> quantum-espresso-6.3_2 depends on executable: gmake - found
===> Returning to build of quantum-espresso-6.3_2
===> quantum-espresso-6.3_2 depends on file: /usr/local/bin/python2.7 - not found
===> Installing existing package /packages/All/python27-2.7.15.txz
[head-armv7-default-job-20] Installing python27-2.7.15...
[head-armv7-default-job-20] `-- Installing libffi-3.2.1_2...
[head-armv7-default-job-20] `-- Extracting libffi-3.2.1_2: .......... done
[head-armv7-default-job-20] `-- Installing readline-7.0.3_1...
[head-armv7-default-job-20] `-- Extracting readline-7.0.3_1: .......... done
[head-armv7-default-job-20] Extracting python27-2.7.15: .......... done
Message from python27-2.7.15:
===========================================================================
Note that some standard Python modules are provided as separate ports
as they require additional dependencies. They are available as:
bsddb databases/py-bsddb
gdbm databases/py-gdbm
sqlite3 databases/py-sqlite3
tkinter x11-toolkits/py-tkinter
===========================================================================
===> quantum-espresso-6.3_2 depends on file: /usr/local/bin/python2.7 - found
===> Returning to build of quantum-espresso-6.3_2
===> quantum-espresso-6.3_2 depends on file: /usr/local/bin/as - found
===========================================================================
=======================<phase: lib-depends >============================
===> quantum-espresso-6.3_2 depends on shared library: libmpich.so - not found
===> Installing existing package /packages/All/mpich2-1.5_11,5.txz
[head-armv7-default-job-20] Installing mpich2-1.5_11,5...
[head-armv7-default-job-20] `-- Installing libX11-1.6.5_1,1...
[head-armv7-default-job-20] | `-- Installing libXau-1.0.8_4...
[head-armv7-default-job-20] | | `-- Installing xorgproto-2018.4...
[head-armv7-default-job-20] | | `-- Extracting xorgproto-2018.4: .......... done
[head-armv7-default-job-20] | `-- Extracting libXau-1.0.8_4: .......... done
[head-armv7-default-job-20] | `-- Installing libXdmcp-1.1.2_1...
[head-armv7-default-job-20] | `-- Extracting libXdmcp-1.1.2_1: ......... done
[head-armv7-default-job-20] | `-- Installing libxcb-1.13...
[head-armv7-default-job-20] | | `-- Installing libpthread-stubs-0.4...
[head-armv7-default-job-20] | | `-- Extracting libpthread-stubs-0.4: .... done
[head-armv7-default-job-20] | | `-- Installing libxml2-2.9.7...
[head-armv7-default-job-20] | | `-- Extracting libxml2-2.9.7: .......... done
[head-armv7-default-job-20] | `-- Extracting libxcb-1.13: .......... done
[head-armv7-default-job-20] `-- Extracting libX11-1.6.5_1,1: .......... done
[head-armv7-default-job-20] `-- Installing libXt-1.1.5_1,1...
[head-armv7-default-job-20] | `-- Installing libICE-1.0.9_2,1...
[head-armv7-default-job-20] | `-- Extracting libICE-1.0.9_2,1: .......... done
[head-armv7-default-job-20] | `-- Installing libSM-1.2.2_4,1...
[head-armv7-default-job-20] | `-- Extracting libSM-1.2.2_4,1: .......... done
[head-armv7-default-job-20] `-- Extracting libXt-1.1.5_1,1: .......... done
[head-armv7-default-job-20] Extracting mpich2-1.5_11,5: .......... done
Message from mpich2-1.5_11,5:
=======================================================================
MPICH-2 has been installed under /usr/local.
/!\ IMPORTANT /!\
Please change the password in /usr/local/etc/mpd.conf
=======================================================================
===> quantum-espresso-6.3_2 depends on shared library: libmpich.so - found (/usr/local/lib/libmpich.so)
===> Returning to build of quantum-espresso-6.3_2
===> quantum-espresso-6.3_2 depends on shared library: libblas.so - not found
===> Installing existing package /packages/All/blas-3.5.0_4.txz
[head-armv7-default-job-20] Installing blas-3.5.0_4...
[head-armv7-default-job-20] Extracting blas-3.5.0_4: ....... done
===> quantum-espresso-6.3_2 depends on shared library: libblas.so - found (/usr/local/lib/libblas.so)
===> Returning to build of quantum-espresso-6.3_2
===> quantum-espresso-6.3_2 depends on shared library: liblapack.so - not found
===> Installing existing package /packages/All/lapack-3.5.0_5.txz
[head-armv7-default-job-20] Installing lapack-3.5.0_5...
[head-armv7-default-job-20] Extracting lapack-3.5.0_5: .......... done
===> quantum-espresso-6.3_2 depends on shared library: liblapack.so - found (/usr/local/lib/liblapack.so)
===> Returning to build of quantum-espresso-6.3_2
===========================================================================
=======================<phase: configure >============================
===> Configuring for quantum-espresso-6.3_2
./configure: line 36: $'\115\101N\125\101\114\075\040\125\163\141\147\145\n\040\040\040\143\157nf\151\147\165r\145\040\133\055h\054\040\055\055h\145\154\160\135\040\133\055\055\163\141v\145\135\040\133\074\143\157nf\137f\154\141\147\163>\135\n\n\040\055h\054\040\055\055h\145\154\160\040\040\040\040\040\040\040\040\040\040\040\160r\151n\164\040\164h\151\163\040\155\141n\165\141\154\040\040\040\040\n\040\040\040\040\040\055\055\163\141v\145\040\040\040\040\040\040\040\040\040\040\040\144\157\040n\157\164\040\155\141\153\145\040\143\154\145\141n\n\040\074\143\157nf\137f\154\141\147\163>\040\040\040\040\040\040\040\040\040\164h\145\163\145\040f\154\141\147\163\040\167\151\154\154\040b\145\040\160\141\163\163\145\144\040\164\157\040\n\040\040\040\040\040\040\040\040\040\040\040\040\040\040\040\040\040\040\040\040\040\040\164h\145\040\141\165\164\157\143\157nf\040\143\157nf\151\147\165r\145\n\n\040\101f\164\145r\040\143\157nf\151\147\165r\141\164\151\157n\054\040\164h\145\040\155\141\153\1
45.\151n\143\040f\151\154\145\040\167\151\154\154\040b\145\040\143r\145\141\164\145\144\040\151n\040\164h\145\n\040\121\105\040h\157\155\145\040\050\143\165rr\145n\164\051\040\144\151r\145\143\164\157r\171\n\040N\117\124\105:\040\103\125\104\101\040F\157r\164r\141n\040\143\157\144\145\040\141v\141\151\154\141b\154\145\040\157n\154\171\040\141\163\040\141\040\163\145\160\141r\141\164\145\040\160\141\143\153\141\147\145\n\040\n\040\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\n\040\115\141n\165\141\154\040fr\157\155\040\141\165\164\157\143\157nf\040\143\157nf\151\147\165r\145\040:\040\n\040\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\055\05
5\055\055\055\055\055\055\055\055\055\055\05!
5\055\055\055\n': command not found
./configure: line 42: $'\141\165': command not found
./configure: line 43: syntax error near unexpected token `$'f\151''
./configure: line 43: `if [ "$auxdir" != "configure" ] ; then cd $auxdir ; fi'
===> Script "configure" failed unexpectedly.
Please report the problem to yuri at FreeBSD.org [maintainer] and attach the
"/wrkdirs/usr/ports/science/quantum-espresso/work/q-e-qe-6.3/config.log"
including the output of the failure of your make command. Also, it might be
a good idea to provide an overview of all packages installed on your system
(e.g. a /usr/local/sbin/pkg-static info -g -Ea).
*** Error code 1
Stop.
make: stopped in /usr/ports/science/quantum-espresso
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