[package - 103amd64-default][science/libghemical] Failed for libghemical-3.0.0_10 in configure
pkg-fallout at FreeBSD.org
pkg-fallout at FreeBSD.org
Sat Jan 20 03:46:53 UTC 2018
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.
Maintainer: ports at FreeBSD.org
Last committer: gerald at FreeBSD.org
Ident: $FreeBSD: head/science/libghemical/Makefile 449591 2017-09-10 20:55:38Z gerald $
Log URL: http://beefy6.nyi.freebsd.org/data/103amd64-default/459491/logs/libghemical-3.0.0_10.log
Build URL: http://beefy6.nyi.freebsd.org/build.html?mastername=103amd64-default&build=459491
Log:
=>> Building science/libghemical
build started at Sat Jan 20 03:46:17 UTC 2018
port directory: /usr/ports/science/libghemical
package name: libghemical-3.0.0_10
building for: FreeBSD 103amd64-default-job-03 10.3-RELEASE-p26 FreeBSD 10.3-RELEASE-p26 amd64
maintained by: ports at FreeBSD.org
Makefile ident: $FreeBSD: head/science/libghemical/Makefile 449591 2017-09-10 20:55:38Z gerald $
Poudriere version: 3.2.4
Host OSVERSION: 1200054
Jail OSVERSION: 1003000
Job Id: 03
---Begin Environment---
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MAKE_ARGS=
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---End OPTIONS List---
--MAINTAINER--
ports at FreeBSD.org
--End MAINTAINER--
--CONFIGURE_ARGS--
--enable-mpqc --x-libraries=/usr/local/lib --x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--
--CONFIGURE_ENV--
F77="gfortran6" FC="gfortran6" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc6" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc6" MAKE=gmake PKG_CONFIG=pkgconf XDG_DATA_HOME=/wrkdirs/usr/ports/science/libghemical/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/libghemical/work HOME=/wrkdirs/usr/ports/science/libghemical/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/libghemical/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/games:/usr/local/sbin:/usr/local/bin:/root/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--
--MAKE_ENV--
F77="gfortran6" FC="gfortran6" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc6" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc6" XDG_DATA_HOME=/wrkdirs/usr/ports/science/libghemical/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/libghemical/work HOME=/wrkdirs/usr/ports/science/libghemical/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/libghemical/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/games:/usr/local/sbin:/usr/local/bin:/root/bin NO_PIE=yes WITHOUT_DEBUG_FILES=yes WITHOUT_KERNEL_SYMBOLS=yes SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local LOCALBASE=/usr/local LIBDIR="/usr/lib" CC="cc" CFLAGS="-O2 -pipe -fstack-
protector -fno-strict-aliasing" CPP="cpp" CPPFLAGS="-I/usr/local/include" LDFLAGS=" -L/usr/local/lib -lSCbasis -lSCcints -lSCclass -lSCcontainer -lSCdft -lSCgroup -lSCintv3 -lSCisosurf -lSCkeyval -lSCmbpt -lSCmbptr12 -lSCmisc -lSCmolecule -lSCoint3 -lSCoptimize -lSCoptions -lSCpsi -lSCref -lSCrender -lSCscf -lSCscmat -lSCsolvent -lSCstate -lSCsymmetry -lSCwfn -lgfortran -lpthread -lblas -llapack -Wl,-rpath=/usr/local/lib/gcc6 -L/usr/local/lib/gcc6 -B/usr/local/bin -fstack-protector" LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444"
--End MAKE_ENV--
--PLIST_SUB--
LIBGHEMICAL_VERSION="3.0.0" PORTDOCS="" PORTEXAMPLES="" OSREL=10.3 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/libghemical" EXAMPLESDIR="share/examples/libghemical" DATADIR="share/libghemical" WWWDIR="www/libghemical" ETCDIR="etc/libghemical"
--End PLIST_SUB--
--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/libghemical DOCSDIR=/usr/local/share/doc/libghemical EXAMPLESDIR=/usr/local/share/examples/libghemical WWWDIR=/usr/local/www/libghemical ETCDIR=/usr/local/etc/libghemical
--End SUB_LIST--
---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
#### /usr/local/etc/poudriere.d/make.conf ####
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure. It currently retries the same
# failed mirror and then fails rather then trying another. It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
#### /usr/ports/Mk/Scripts/ports_env.sh ####
ARCH=amd64
CONFIGURE_MAX_CMD_LEN=262144
HAVE_COMPAT_IA32_KERN=YES
OPSYS=FreeBSD
OSREL=10.3
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PYTHONBASE=/usr/local
UID=0
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#### Misc Poudriere ####
GID=0
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cpu time (seconds, -t) unlimited
file size (512-blocks, -f) unlimited
data seg size (kbytes, -d) 33554432
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core file size (512-blocks, -c) unlimited
max memory size (kbytes, -m) unlimited
locked memory (kbytes, -l) unlimited
max user processes (-u) 89999
open files (-n) 1024
virtual mem size (kbytes, -v) unlimited
swap limit (kbytes, -w) unlimited
sbsize (bytes, -b) unlimited
pseudo-terminals (-p) unlimited
--End resource limits--
=======================<phase: check-sanity >============================
===> NOTICE:
The libghemical port currently does not have a maintainer. As a result, it is
more likely to have unresolved issues, not be up-to-date, or even be removed in
the future. To volunteer to maintain this port, please create an issue at:
https://bugs.freebsd.org/bugzilla
More information about port maintainership is available at:
https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port
===========================================================================
=======================<phase: pkg-depends >============================
===> libghemical-3.0.0_10 depends on file: /usr/local/sbin/pkg - not found
===> Installing existing package /packages/All/pkg-1.10.4.txz
[103amd64-default-job-03] Installing pkg-1.10.4...
[103amd64-default-job-03] Extracting pkg-1.10.4: .......... done
===> libghemical-3.0.0_10 depends on file: /usr/local/sbin/pkg - found
===> Returning to build of libghemical-3.0.0_10
===========================================================================
=======================<phase: fetch-depends >============================
===========================================================================
=======================<phase: fetch >============================
===> NOTICE:
The libghemical port currently does not have a maintainer. As a result, it is
more likely to have unresolved issues, not be up-to-date, or even be removed in
the future. To volunteer to maintain this port, please create an issue at:
https://bugs.freebsd.org/bugzilla
More information about port maintainership is available at:
https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port
===> Fetching all distfiles required by libghemical-3.0.0_10 for building
===========================================================================
=======================<phase: checksum >============================
===> NOTICE:
The libghemical port currently does not have a maintainer. As a result, it is
more likely to have unresolved issues, not be up-to-date, or even be removed in
the future. To volunteer to maintain this port, please create an issue at:
https://bugs.freebsd.org/bugzilla
More information about port maintainership is available at:
https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port
===> Fetching all distfiles required by libghemical-3.0.0_10 for building
=> SHA256 Checksum OK for libghemical-3.0.0.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract >============================
===> NOTICE:
The libghemical port currently does not have a maintainer. As a result, it is
more likely to have unresolved issues, not be up-to-date, or even be removed in
the future. To volunteer to maintain this port, please create an issue at:
https://bugs.freebsd.org/bugzilla
More information about port maintainership is available at:
https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port
===> Fetching all distfiles required by libghemical-3.0.0_10 for building
===> Extracting for libghemical-3.0.0_10
=> SHA256 Checksum OK for libghemical-3.0.0.tar.gz.
===========================================================================
=======================<phase: patch-depends >============================
===========================================================================
=======================<phase: patch >============================
===> Patching for libghemical-3.0.0_10
===========================================================================
<snip>
[103amd64-default-job-03] Extracting intltool-0.51.0_1: .......... done
Message from perl5-5.24.3:
The /usr/bin/perl symlink has been removed starting with Perl 5.20.
For shebangs, you should either use:
#!/usr/local/bin/perl
or
#!/usr/bin/env perl
The first one will only work if you have a /usr/local/bin/perl,
the second will work as long as perl is in PATH.
===> libghemical-3.0.0_10 depends on executable: intltool-update - found
===> Returning to build of libghemical-3.0.0_10
===> libghemical-3.0.0_10 depends on executable: ld - found
===> libghemical-3.0.0_10 depends on executable: gfortran6 - not found
===> Installing existing package /packages/All/gcc6-6.4.0_3.txz
[103amd64-default-job-03] Installing gcc6-6.4.0_3...
[103amd64-default-job-03] `-- Installing binutils-2.28,1...
[103amd64-default-job-03] `-- Extracting binutils-2.28,1: .......... done
[103amd64-default-job-03] `-- Installing gcc-ecj-4.5...
[103amd64-default-job-03] `-- Extracting gcc-ecj-4.5: . done
[103amd64-default-job-03] `-- Installing gmp-6.1.2...
[103amd64-default-job-03] `-- Extracting gmp-6.1.2: .......... done
[103amd64-default-job-03] `-- Installing mpc-1.0.3...
[103amd64-default-job-03] | `-- Installing mpfr-3.1.6...
[103amd64-default-job-03] | `-- Extracting mpfr-3.1.6: .......... done
[103amd64-default-job-03] `-- Extracting mpc-1.0.3: ...... done
[103amd64-default-job-03] Extracting gcc6-6.4.0_3: .......... done
Message from gcc6-6.4.0_3:
To ensure binaries built with this toolchain find appropriate versions
of the necessary run-time libraries, you may want to link using
-Wl,-rpath=/usr/local/lib/gcc6
For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens
transparently.
===> libghemical-3.0.0_10 depends on executable: gfortran6 - found
===> Returning to build of libghemical-3.0.0_10
===> libghemical-3.0.0_10 depends on executable: msgfmt - not found
===> Installing existing package /packages/All/gettext-tools-0.19.8.1.txz
[103amd64-default-job-03] Installing gettext-tools-0.19.8.1...
[103amd64-default-job-03] Extracting gettext-tools-0.19.8.1: .......... done
===> libghemical-3.0.0_10 depends on executable: msgfmt - found
===> Returning to build of libghemical-3.0.0_10
===> libghemical-3.0.0_10 depends on executable: gmake - not found
===> Installing existing package /packages/All/gmake-4.2.1_1.txz
[103amd64-default-job-03] Installing gmake-4.2.1_1...
[103amd64-default-job-03] Extracting gmake-4.2.1_1: .......... done
===> libghemical-3.0.0_10 depends on executable: gmake - found
===> Returning to build of libghemical-3.0.0_10
===> libghemical-3.0.0_10 depends on package: pkgconf>=1.3.0_1 - not found
===> Installing existing package /packages/All/pkgconf-1.4.0,1.txz
[103amd64-default-job-03] Installing pkgconf-1.4.0,1...
[103amd64-default-job-03] Extracting pkgconf-1.4.0,1: .......... done
===> libghemical-3.0.0_10 depends on package: pkgconf>=1.3.0_1 - found
===> Returning to build of libghemical-3.0.0_10
===> libghemical-3.0.0_10 depends on file: /usr/local/bin/as - found
===> libghemical-3.0.0_10 depends on file: /usr/local/lib/libGL.so - not found
===> Installing existing package /packages/All/mesa-libs-17.3.1.txz
[103amd64-default-job-03] Installing mesa-libs-17.3.1...
[103amd64-default-job-03] `-- Installing libX11-1.6.5,1...
[103amd64-default-job-03] | `-- Installing kbproto-1.0.7...
[103amd64-default-job-03] | `-- Extracting kbproto-1.0.7: .......... done
[103amd64-default-job-03] | `-- Installing libXau-1.0.8_3...
[103amd64-default-job-03] | | `-- Installing xproto-7.0.31...
[103amd64-default-job-03] | | `-- Extracting xproto-7.0.31: .......... done
[103amd64-default-job-03] | `-- Extracting libXau-1.0.8_3: .......... done
[103amd64-default-job-03] | `-- Installing libXdmcp-1.1.2...
[103amd64-default-job-03] | `-- Extracting libXdmcp-1.1.2: ......... done
[103amd64-default-job-03] | `-- Installing libxcb-1.12_2...
[103amd64-default-job-03] | | `-- Installing libpthread-stubs-0.4...
[103amd64-default-job-03] | | `-- Extracting libpthread-stubs-0.4: . done
[103amd64-default-job-03] | `-- Extracting libxcb-1.12_2: .......... done
[103amd64-default-job-03] `-- Extracting libX11-1.6.5,1: .......... done
[103amd64-default-job-03] `-- Installing libXdamage-1.1.4_3...
[103amd64-default-job-03] | `-- Installing damageproto-1.2.1...
[103amd64-default-job-03] | `-- Extracting damageproto-1.2.1: .... done
[103amd64-default-job-03] | `-- Installing libXfixes-5.0.3...
[103amd64-default-job-03] | | `-- Installing fixesproto-5.0...
[103amd64-default-job-03] | | `-- Extracting fixesproto-5.0: .... done
[103amd64-default-job-03] | `-- Extracting libXfixes-5.0.3: .......... done
[103amd64-default-job-03] `-- Extracting libXdamage-1.1.4_3: ...... done
[103amd64-default-job-03] `-- Installing libXext-1.3.3_1,1...
[103amd64-default-job-03] | `-- Installing xextproto-7.3.0...
[103amd64-default-job-03] | `-- Extracting xextproto-7.3.0: .......... done
[103amd64-default-job-03] `-- Extracting libXext-1.3.3_1,1: .......... done
[103amd64-default-job-03] `-- Installing libXxf86vm-1.1.4_1...
[103amd64-default-job-03] | `-- Installing xf86vidmodeproto-2.3.1...
[103amd64-default-job-03] | `-- Extracting xf86vidmodeproto-2.3.1: .... done
[103amd64-default-job-03] `-- Extracting libXxf86vm-1.1.4_1: .......... done
[103amd64-default-job-03] `-- Installing libdrm-2.4.89,1...
[103amd64-default-job-03] | `-- Installing libpciaccess-0.13.5...
[103amd64-default-job-03] | | `-- Installing pciids-20171206...
[103amd64-default-job-03] | | `-- Extracting pciids-20171206: ..... done
[103amd64-default-job-03] | `-- Extracting libpciaccess-0.13.5: ...... done
[103amd64-default-job-03] `-- Extracting libdrm-2.4.89,1: .......... done
[103amd64-default-job-03] `-- Installing libunwind-20170113_1...
[103amd64-default-job-03] `-- Extracting libunwind-20170113_1: .......... done
[103amd64-default-job-03] `-- Installing libxshmfence-1.2_2...
[103amd64-default-job-03] `-- Extracting libxshmfence-1.2_2: ......... done
[103amd64-default-job-03] Extracting mesa-libs-17.3.1: .......... done
===> libghemical-3.0.0_10 depends on file: /usr/local/lib/libGL.so - found
===> Returning to build of libghemical-3.0.0_10
===> libghemical-3.0.0_10 depends on file: /usr/local/libdata/pkgconfig/glproto.pc - not found
===> Installing existing package /packages/All/glproto-1.4.17.txz
[103amd64-default-job-03] Installing glproto-1.4.17...
[103amd64-default-job-03] Extracting glproto-1.4.17: ...... done
===> libghemical-3.0.0_10 depends on file: /usr/local/libdata/pkgconfig/glproto.pc - found
===> Returning to build of libghemical-3.0.0_10
===> libghemical-3.0.0_10 depends on file: /usr/local/libdata/pkgconfig/dri2proto.pc - not found
===> Installing existing package /packages/All/dri2proto-2.8.txz
[103amd64-default-job-03] Installing dri2proto-2.8...
[103amd64-default-job-03] Extracting dri2proto-2.8: .... done
===> libghemical-3.0.0_10 depends on file: /usr/local/libdata/pkgconfig/dri2proto.pc - found
===> Returning to build of libghemical-3.0.0_10
===> libghemical-3.0.0_10 depends on file: /usr/local/libdata/pkgconfig/dri3proto.pc - not found
===> Installing existing package /packages/All/dri3proto-1.0.txz
[103amd64-default-job-03] Installing dri3proto-1.0...
[103amd64-default-job-03] Extracting dri3proto-1.0: ...... done
===> libghemical-3.0.0_10 depends on file: /usr/local/libdata/pkgconfig/dri3proto.pc - found
===> Returning to build of libghemical-3.0.0_10
===========================================================================
=======================<phase: lib-depends >============================
===> libghemical-3.0.0_10 depends on shared library: libmpqc.so - not found
===> Installing existing package /packages/All/mpqc-2.3.1_32.txz
[103amd64-default-job-03] Installing mpqc-2.3.1_32...
[103amd64-default-job-03] `-- Installing blas-3.5.0_3...
[103amd64-default-job-03] `-- Extracting blas-3.5.0_3: ....... done
[103amd64-default-job-03] `-- Installing lapack-3.5.0_3...
[103amd64-default-job-03] `-- Extracting lapack-3.5.0_3: .......... done
[103amd64-default-job-03] `-- Installing libint-1.1.6_6...
[103amd64-default-job-03] `-- Extracting libint-1.1.6_6: .......... done
[103amd64-default-job-03] Extracting mpqc-2.3.1_32: .......... done
Message from libint-1.1.6_6:
===> NOTICE:
The libint port currently does not have a maintainer. As a result, it is
more likely to have unresolved issues, not be up-to-date, or even be removed in
the future. To volunteer to maintain this port, please create an issue at:
https://bugs.freebsd.org/bugzilla
More information about port maintainership is available at:
https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port
Message from mpqc-2.3.1_32:
===> NOTICE:
The mpqc port currently does not have a maintainer. As a result, it is
more likely to have unresolved issues, not be up-to-date, or even be removed in
the future. To volunteer to maintain this port, please create an issue at:
https://bugs.freebsd.org/bugzilla
More information about port maintainership is available at:
https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port
===> libghemical-3.0.0_10 depends on shared library: libmpqc.so - found (/usr/local/lib/libmpqc.so)
===> Returning to build of libghemical-3.0.0_10
===> libghemical-3.0.0_10 depends on shared library: libf2c.so - not found
===> Installing existing package /packages/All/f2c-20060810_6.txz
[103amd64-default-job-03] Installing f2c-20060810_6...
[103amd64-default-job-03] Extracting f2c-20060810_6: .......... done
===> libghemical-3.0.0_10 depends on shared library: libf2c.so - found (/usr/local/lib/libf2c.so)
===> Returning to build of libghemical-3.0.0_10
===> libghemical-3.0.0_10 depends on shared library: libintl.so - found (/usr/local/lib/libintl.so)
===========================================================================
=======================<phase: configure >============================
===> Configuring for libghemical-3.0.0_10
===> FreeBSD 10 autotools fix applied to /wrkdirs/usr/ports/science/libghemical/work/libghemical-3.0.0/aclocal.m4
===> FreeBSD 10 autotools fix applied to /wrkdirs/usr/ports/science/libghemical/work/libghemical-3.0.0/configure
configure: loading site script /usr/ports/Templates/config.site
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... (cached) /bin/mkdir -p
checking for gawk... (cached) /usr/bin/awk
checking whether gmake sets $(MAKE)... yes
checking build system type... amd64-portbld-freebsd10.3
checking host system type... amd64-portbld-freebsd10.3
checking for gcc... cc
checking whether the C compiler works... no
configure: error: in `/wrkdirs/usr/ports/science/libghemical/work/libghemical-3.0.0':
configure: error: C compiler cannot create executables
See `config.log' for more details
===> Script "configure" failed unexpectedly.
Please report the problem to ports at FreeBSD.org [maintainer] and attach the
"/wrkdirs/usr/ports/science/libghemical/work/libghemical-3.0.0/config.log"
including the output of the failure of your make command. Also, it might be
a good idea to provide an overview of all packages installed on your system
(e.g. a /usr/local/sbin/pkg-static info -g -Ea).
*** Error code 1
Stop.
make: stopped in /usr/ports/science/libghemical
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