[package - head-mips64-default][science/openbabel] Failed for openbabel-2.3.2_2 in build
pkg-fallout at FreeBSD.org
pkg-fallout at FreeBSD.org
Fri May 6 14:19:38 UTC 2016
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.
Maintainer: makc at FreeBSD.org
Last committer: swills at FreeBSD.org
Ident: $FreeBSD: head/science/openbabel/Makefile 413746 2016-04-21 16:43:14Z swills $
Log URL: http://beefy8.nyi.freebsd.org/data/head-mips64-default/p414461_s298930/logs/openbabel-2.3.2_2.log
Build URL: http://beefy8.nyi.freebsd.org/build.html?mastername=head-mips64-default&build=p414461_s298930
Log:
====>> Building science/openbabel
build started at Fri May 6 07:21:07 UTC 2016
port directory: /usr/ports/science/openbabel
building for: FreeBSD head-mips64-default-job-24 11.0-CURRENT FreeBSD 11.0-CURRENT r298930 mips
maintained by: makc at FreeBSD.org
Makefile ident: $FreeBSD: head/science/openbabel/Makefile 413746 2016-04-21 16:43:14Z swills $
Poudriere version: 3.1.12
Host OSVERSION: 1100102
Jail OSVERSION: 1100106
!!! Jail is newer than host. (Jail: 1100106, Host: 1100102) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!
---Begin Environment---
SHELL=/bin/csh
UNAME_p=mips64
UNAME_m=mips
ABI_FILE=/usr/lib/crt1.o
UNAME_v=FreeBSD 11.0-CURRENT r298930
UNAME_r=11.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
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OPSYS=FreeBSD
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UID=0
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
_JAVA_VERSION_LIST_REGEXP=1.6\|1.7\|1.8\|1.6+\|1.7+\|1.8+
POUDRIERE_BUILD_TYPE=bulk
PKGNAME=openbabel-2.3.2_2
OSREL=11.0
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PYTHONBASE=/usr/local
OLDPWD=/
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PWD=/usr/local/poudriere/data/.m/head-mips64-default/ref/.p/pool
MASTERNAME=head-mips64-default
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_JAVA_OS_LIST_REGEXP=native\|linux
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---End Environment---
---Begin OPTIONS List---
===> The following configuration options are available for openbabel-2.3.2_2:
CAIRO=off: PNG support via cairo library
PYTHON=on: Python bindings or support
===> Use 'make config' to modify these settings
---End OPTIONS List---
--CONFIGURE_ARGS--
--End CONFIGURE_ARGS--
--CONFIGURE_ENV--
PYTHON="/usr/local/bin/python2.7" XDG_DATA_HOME=/wrkdirs/usr/ports/science/openbabel/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/openbabel/work HOME=/wrkdirs/usr/ports/science/openbabel/work TMPDIR="/tmp" SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--
--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/science/openbabel/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/openbabel/work HOME=/wrkdirs/usr/ports/science/openbabel/work TMPDIR="/tmp" NO_PIE=yes WITHOUT_DEBUG_FILES=yes WITHOUT_KERNEL_SYMBOLS=yes SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local LOCALBASE=/usr/local LIBDIR="/usr/lib" CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -G0 -fno-strict-aliasing" CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS="" LDFLAGS="" LIBS="" CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 444" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444"
--End MAKE_ENV--
--PLIST_SUB--
VERSION="2.3.2"
CAIRO="@comment
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NO_CAIRO=""
PYTHON=""
NO_PYTHON="@comment
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CMAKE_BUILD_TYPE="release"
PYTHON_INCLUDEDIR=include/python2.7
PYTHON_LIBDIR=lib/python2.7
PYTHON_PLATFORM=freebsd11
PYTHON_SITELIBDIR=lib/python2.7/site-packages
PYTHON_VER=2.7
PYTHON_VERSION=python2.7
GTK2_VERSION="2.10.0"
GTK3_VERSION="3.0.0"
OSREL=11.0
PREFIX=%D
LOCALBASE=/usr/local
RESETPREFIX=/usr/local
PORTDOCS=""
PORTEXAMPLES=""
LIB32DIR=lib
DOCSDIR="share/doc/openbabel"
EXAMPLESDIR="share/examples/openbabel"
DATADIR="share/openbabel"
WWWDIR="www/openbabel"
ETCDIR="etc/openbabel"
--End PLIST_SUB--
--SUB_LIST--
CAIRO="@comment
"
NO_CAIRO=""
PYTHON=""
NO_PYTHON="@comment
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PREFIX=/usr/local
LOCALBASE=/usr/local
DATADIR=/usr/local/share/openbabel
DOCSDIR=/usr/local/share/doc/openbabel
EXAMPLESDIR=/usr/local/share/examples/openbabel
WWWDIR=/usr/local/www/openbabel
ETCDIR=/usr/local/etc/openbabel
--End SUB_LIST--
---Begin make.conf---
CC=/nxb-bin/usr/bin/cc
CPP=/nxb-bin/usr/bin/cpp
CXX=/nxb-bin/usr/bin/c++
AS=/nxb-bin/usr/bin/as
NM=/nxb-bin/usr/bin/nm
LD=/nxb-bin/usr/bin/ld
OBJCOPY=/nxb-bin/usr/bin/objcopy
SIZE=/nxb-bin/usr/bin/size
STRIPBIN=/nxb-bin/usr/bin/strip
SED=/nxb-bin/usr/bin/sed
READELF=/nxb-bin/usr/bin/readelf
RANLIB=/nxb-bin/usr/bin/ranlib
YACC=/nxb-bin/usr/bin/yacc
NM=/nxb-bin/usr/bin/nm
MAKE=/nxb-bin/usr/bin/make
STRINGS=/nxb-bin/usr/bin/strings
AWK=/nxb-bin/usr/bin/awk
FLEX=/nxb-bin/usr/bin/flex
CC=/nxb-bin/usr/bin/cc
CPP=/nxb-bin/usr/bin/cpp
CXX=/nxb-bin/usr/bin/c++
AS=/nxb-bin/usr/bin/as
NM=/nxb-bin/usr/bin/nm
LD=/nxb-bin/usr/bin/ld
OBJCOPY=/nxb-bin/usr/bin/objcopy
SIZE=/nxb-bin/usr/bin/size
STRIPBIN=/nxb-bin/usr/bin/strip
SED=/nxb-bin/usr/bin/sed
READELF=/nxb-bin/usr/bin/readelf
RANLIB=/nxb-bin/usr/bin/ranlib
YACC=/nxb-bin/usr/bin/yacc
NM=/nxb-bin/usr/bin/nm
MAKE=/nxb-bin/usr/bin/make
STRINGS=/nxb-bin/usr/bin/strings
AWK=/nxb-bin/usr/bin/awk
FLEX=/nxb-bin/usr/bin/flex
CC=/nxb-bin/usr/bin/cc
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CXX=/nxb-bin/usr/bin/c++
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RANLIB=/nxb-bin/usr/bin/ranlib
YACC=/nxb-bin/usr/bin/yacc
NM=/nxb-bin/usr/bin/nm
MAKE=/nxb-bin/usr/bin/make
STRINGS=/nxb-bin/usr/bin/strings
AWK=/nxb-bin/usr/bin/awk
FLEX=/nxb-bin/usr/bin/flex
CC=/nxb-bin/usr/bin/cc
CPP=/nxb-bin/usr/bin/cpp
CXX=/nxb-bin/usr/bin/c++
AS=/nxb-bin/usr/bin/as
NM=/nxb-bin/usr/bin/nm
LD=/nxb-bin/usr/bin/ld
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SIZE=/nxb-bin/usr/bin/size
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YACC=/nxb-bin/usr/bin/yacc
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MAKE=/nxb-bin/usr/bin/make
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<snip>
[ 95%] Built target test_ffghemical
/nxb-bin/usr/bin/make -f test/CMakeFiles/test_conversion.dir/build.make test/CMakeFiles/test_conversion.dir/depend
cd /wrkdirs/usr/ports/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2 /wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/test /wrkdirs/usr/ports/science/openbabel/work/.build /wrkdirs/usr/ports/science/openbabel/work/.build/test /wrkdirs/usr/ports/science/openbabel/work/.build/test/CMakeFiles/test_conversion.dir/DependInfo.cmake
Scanning dependencies of target test_conversion
/nxb-bin/usr/bin/make -f test/CMakeFiles/test_conversion.dir/build.make test/CMakeFiles/test_conversion.dir/build
[ 95%] Building CXX object test/CMakeFiles/test_conversion.dir/conversion.o
cd /wrkdirs/usr/ports/science/openbabel/work/.build/test && /nxb-bin/usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -I/wrkdirs/usr/ports/science/openbabel/work/.build/include -I/wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/data -I/wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -O2 -pipe -G0 -fno-strict-aliasing -O2 -pipe -G0 -fno-strict-aliasing -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/wrkdirs/usr/ports/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_conversion.dir/conversion.o -c /wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/test/conversion.cpp
[ 95%] Linking CXX executable ../bin/test_conversion
cd /wrkdirs/usr/ports/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_conversion.dir/link.txt --verbose=1
/nxb-bin/usr/bin/c++ -O2 -pipe -G0 -fno-strict-aliasing -O2 -pipe -G0 -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_conversion.dir/conversion.o -o ../bin/test_conversion ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/wrkdirs/usr/ports/science/openbabel/work/.build/lib
[ 95%] Built target test_conversion
/nxb-bin/usr/bin/make -f test/CMakeFiles/test_internalcoord.dir/build.make test/CMakeFiles/test_internalcoord.dir/depend
cd /wrkdirs/usr/ports/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2 /wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/test /wrkdirs/usr/ports/science/openbabel/work/.build /wrkdirs/usr/ports/science/openbabel/work/.build/test /wrkdirs/usr/ports/science/openbabel/work/.build/test/CMakeFiles/test_internalcoord.dir/DependInfo.cmake
Scanning dependencies of target test_internalcoord
/nxb-bin/usr/bin/make -f test/CMakeFiles/test_internalcoord.dir/build.make test/CMakeFiles/test_internalcoord.dir/build
[ 95%] Building CXX object test/CMakeFiles/test_internalcoord.dir/internalcoord.o
cd /wrkdirs/usr/ports/science/openbabel/work/.build/test && /nxb-bin/usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -I/wrkdirs/usr/ports/science/openbabel/work/.build/include -I/wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/data -I/wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -O2 -pipe -G0 -fno-strict-aliasing -O2 -pipe -G0 -fno-strict-aliasing -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/wrkdirs/usr/ports/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_internalcoord.dir/internalcoord.o -c /wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/test/internalcoord.cpp
[ 95%] Linking CXX executable ../bin/test_internalcoord
cd /wrkdirs/usr/ports/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_internalcoord.dir/link.txt --verbose=1
/nxb-bin/usr/bin/c++ -O2 -pipe -G0 -fno-strict-aliasing -O2 -pipe -G0 -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_internalcoord.dir/internalcoord.o -o ../bin/test_internalcoord ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/wrkdirs/usr/ports/science/openbabel/work/.build/lib
[ 95%] Built target test_internalcoord
/nxb-bin/usr/bin/make -f test/CMakeFiles/test_canonstable.dir/build.make test/CMakeFiles/test_canonstable.dir/depend
cd /wrkdirs/usr/ports/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2 /wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/test /wrkdirs/usr/ports/science/openbabel/work/.build /wrkdirs/usr/ports/science/openbabel/work/.build/test /wrkdirs/usr/ports/science/openbabel/work/.build/test/CMakeFiles/test_canonstable.dir/DependInfo.cmake
Scanning dependencies of target test_canonstable
/nxb-bin/usr/bin/make -f test/CMakeFiles/test_canonstable.dir/build.make test/CMakeFiles/test_canonstable.dir/build
[ 95%] Building CXX object test/CMakeFiles/test_canonstable.dir/canonstabletest.o
cd /wrkdirs/usr/ports/science/openbabel/work/.build/test && /nxb-bin/usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -I/wrkdirs/usr/ports/science/openbabel/work/.build/include -I/wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/data -I/wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -O2 -pipe -G0 -fno-strict-aliasing -O2 -pipe -G0 -fno-strict-aliasing -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/wrkdirs/usr/ports/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_canonstable.dir/canonstabletest.o -c /wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/test/canonstabletest.cpp
[ 95%] Linking CXX executable ../bin/test_canonstable
cd /wrkdirs/usr/ports/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_canonstable.dir/link.txt --verbose=1
/nxb-bin/usr/bin/c++ -O2 -pipe -G0 -fno-strict-aliasing -O2 -pipe -G0 -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_canonstable.dir/canonstabletest.o -o ../bin/test_canonstable ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/wrkdirs/usr/ports/science/openbabel/work/.build/lib
[ 95%] Built target test_canonstable
/nxb-bin/usr/bin/make -f test/CMakeFiles/test_ffgaff.dir/build.make test/CMakeFiles/test_ffgaff.dir/depend
cd /wrkdirs/usr/ports/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2 /wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/test /wrkdirs/usr/ports/science/openbabel/work/.build /wrkdirs/usr/ports/science/openbabel/work/.build/test /wrkdirs/usr/ports/science/openbabel/work/.build/test/CMakeFiles/test_ffgaff.dir/DependInfo.cmake
Scanning dependencies of target test_ffgaff
/nxb-bin/usr/bin/make -f test/CMakeFiles/test_ffgaff.dir/build.make test/CMakeFiles/test_ffgaff.dir/build
[ 95%] Building CXX object test/CMakeFiles/test_ffgaff.dir/ffgaff.o
cd /wrkdirs/usr/ports/science/openbabel/work/.build/test && /nxb-bin/usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -I/wrkdirs/usr/ports/science/openbabel/work/.build/include -I/wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/data -I/wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -O2 -pipe -G0 -fno-strict-aliasing -O2 -pipe -G0 -fno-strict-aliasing -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/wrkdirs/usr/ports/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_ffgaff.dir/ffgaff.o -c /wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/test/ffgaff.cpp
[ 95%] Linking CXX executable ../bin/test_ffgaff
cd /wrkdirs/usr/ports/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_ffgaff.dir/link.txt --verbose=1
/nxb-bin/usr/bin/c++ -O2 -pipe -G0 -fno-strict-aliasing -O2 -pipe -G0 -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_ffgaff.dir/ffgaff.o -o ../bin/test_ffgaff ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/wrkdirs/usr/ports/science/openbabel/work/.build/lib
[ 95%] Built target test_ffgaff
/nxb-bin/usr/bin/make -f test/CMakeFiles/test_math.dir/build.make test/CMakeFiles/test_math.dir/depend
cd /wrkdirs/usr/ports/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2 /wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/test /wrkdirs/usr/ports/science/openbabel/work/.build /wrkdirs/usr/ports/science/openbabel/work/.build/test /wrkdirs/usr/ports/science/openbabel/work/.build/test/CMakeFiles/test_math.dir/DependInfo.cmake
Scanning dependencies of target test_math
/nxb-bin/usr/bin/make -f test/CMakeFiles/test_math.dir/build.make test/CMakeFiles/test_math.dir/build
[ 95%] Building CXX object test/CMakeFiles/test_math.dir/math.o
cd /wrkdirs/usr/ports/science/openbabel/work/.build/test && /nxb-bin/usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -I/wrkdirs/usr/ports/science/openbabel/work/.build/include -I/wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/data -I/wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -O2 -pipe -G0 -fno-strict-aliasing -O2 -pipe -G0 -fno-strict-aliasing -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/wrkdirs/usr/ports/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_math.dir/math.o -c /wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/test/math.cpp
[ 95%] Linking CXX executable ../bin/test_math
cd /wrkdirs/usr/ports/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_math.dir/link.txt --verbose=1
/nxb-bin/usr/bin/c++ -O2 -pipe -G0 -fno-strict-aliasing -O2 -pipe -G0 -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_math.dir/math.o -o ../bin/test_math ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/wrkdirs/usr/ports/science/openbabel/work/.build/lib
[ 95%] Built target test_math
/nxb-bin/usr/bin/make -f test/CMakeFiles/test_spectrophore.dir/build.make test/CMakeFiles/test_spectrophore.dir/depend
cd /wrkdirs/usr/ports/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2 /wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/test /wrkdirs/usr/ports/science/openbabel/work/.build /wrkdirs/usr/ports/science/openbabel/work/.build/test /wrkdirs/usr/ports/science/openbabel/work/.build/test/CMakeFiles/test_spectrophore.dir/DependInfo.cmake
Scanning dependencies of target test_spectrophore
/nxb-bin/usr/bin/make -f test/CMakeFiles/test_spectrophore.dir/build.make test/CMakeFiles/test_spectrophore.dir/build
[ 95%] Building CXX object test/CMakeFiles/test_spectrophore.dir/spectrophoretest.o
cd /wrkdirs/usr/ports/science/openbabel/work/.build/test && /nxb-bin/usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -I/wrkdirs/usr/ports/science/openbabel/work/.build/include -I/wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/data -I/wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -O2 -pipe -G0 -fno-strict-aliasing -O2 -pipe -G0 -fno-strict-aliasing -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/wrkdirs/usr/ports/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_spectrophore.dir/spectrophoretest.o -c /wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/test/spectrophoretest.cpp
[ 95%] Linking CXX executable ../bin/test_spectrophore
cd /wrkdirs/usr/ports/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_spectrophore.dir/link.txt --verbose=1
/nxb-bin/usr/bin/c++ -O2 -pipe -G0 -fno-strict-aliasing -O2 -pipe -G0 -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_spectrophore.dir/spectrophoretest.o -o ../bin/test_spectrophore ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/wrkdirs/usr/ports/science/openbabel/work/.build/lib
[ 95%] Built target test_spectrophore
/nxb-bin/usr/bin/make -f test/CMakeFiles/test_logp_psa.dir/build.make test/CMakeFiles/test_logp_psa.dir/depend
cd /wrkdirs/usr/ports/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2 /wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/test /wrkdirs/usr/ports/science/openbabel/work/.build /wrkdirs/usr/ports/science/openbabel/work/.build/test /wrkdirs/usr/ports/science/openbabel/work/.build/test/CMakeFiles/test_logp_psa.dir/DependInfo.cmake
Scanning dependencies of target test_logp_psa
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[ 95%] Building CXX object test/CMakeFiles/test_logp_psa.dir/logp_psa.o
cd /wrkdirs/usr/ports/science/openbabel/work/.build/test && /nxb-bin/usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -I/wrkdirs/usr/ports/science/openbabel/work/.build/include -I/wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/data -I/wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -O2 -pipe -G0 -fno-strict-aliasing -O2 -pipe -G0 -fno-strict-aliasing -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/wrkdirs/usr/ports/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_logp_psa.dir/logp_psa.o -c /wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/test/logp_psa.cpp
[ 95%] Linking CXX executable ../bin/test_logp_psa
cd /wrkdirs/usr/ports/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_logp_psa.dir/link.txt --verbose=1
/nxb-bin/usr/bin/c++ -O2 -pipe -G0 -fno-strict-aliasing -O2 -pipe -G0 -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_logp_psa.dir/logp_psa.o -o ../bin/test_logp_psa ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/wrkdirs/usr/ports/science/openbabel/work/.build/lib
[ 95%] Built target test_logp_psa
/nxb-bin/usr/bin/make -f test/CMakeFiles/test_inchiwrite.dir/build.make test/CMakeFiles/test_inchiwrite.dir/depend
cd /wrkdirs/usr/ports/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2 /wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/test /wrkdirs/usr/ports/science/openbabel/work/.build /wrkdirs/usr/ports/science/openbabel/work/.build/test /wrkdirs/usr/ports/science/openbabel/work/.build/test/CMakeFiles/test_inchiwrite.dir/DependInfo.cmake
Scanning dependencies of target test_inchiwrite
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[ 95%] Building CXX object test/CMakeFiles/test_inchiwrite.dir/inchiwrite.o
cd /wrkdirs/usr/ports/science/openbabel/work/.build/test && /nxb-bin/usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -I/wrkdirs/usr/ports/science/openbabel/work/.build/include -I/wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/data -I/wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -O2 -pipe -G0 -fno-strict-aliasing -O2 -pipe -G0 -fno-strict-aliasing -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/wrkdirs/usr/ports/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_inchiwrite.dir/inchiwrite.o -c /wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/test/inchiwrite.cpp
[ 96%] Building CXX object test/CMakeFiles/test_inchiwrite.dir/__/src/formats/getinchi.o
cd /wrkdirs/usr/ports/science/openbabel/work/.build/test && /nxb-bin/usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -I/wrkdirs/usr/ports/science/openbabel/work/.build/include -I/wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/data -I/wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -O2 -pipe -G0 -fno-strict-aliasing -O2 -pipe -G0 -fno-strict-aliasing -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/wrkdirs/usr/ports/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_inchiwrite.dir/__/src/formats/getinchi.o -c /wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/src/formats/getinchi.cpp
[ 96%] Linking CXX executable ../bin/test_inchiwrite
cd /wrkdirs/usr/ports/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_inchiwrite.dir/link.txt --verbose=1
/nxb-bin/usr/bin/c++ -O2 -pipe -G0 -fno-strict-aliasing -O2 -pipe -G0 -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_inchiwrite.dir/inchiwrite.o CMakeFiles/test_inchiwrite.dir/__/src/formats/getinchi.o -o ../bin/test_inchiwrite ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/wrkdirs/usr/ports/science/openbabel/work/.build/lib
[ 96%] Built target test_inchiwrite
/nxb-bin/usr/bin/make -f test/CMakeFiles/test_isomorphism.dir/build.make test/CMakeFiles/test_isomorphism.dir/depend
cd /wrkdirs/usr/ports/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2 /wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/test /wrkdirs/usr/ports/science/openbabel/work/.build /wrkdirs/usr/ports/science/openbabel/work/.build/test /wrkdirs/usr/ports/science/openbabel/work/.build/test/CMakeFiles/test_isomorphism.dir/DependInfo.cmake
Scanning dependencies of target test_isomorphism
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[ 96%] Building CXX object test/CMakeFiles/test_isomorphism.dir/isomorphismtest.o
cd /wrkdirs/usr/ports/science/openbabel/work/.build/test && /nxb-bin/usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -I/wrkdirs/usr/ports/science/openbabel/work/.build/include -I/wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/data -I/wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -O2 -pipe -G0 -fno-strict-aliasing -O2 -pipe -G0 -fno-strict-aliasing -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/wrkdirs/usr/ports/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_isomorphism.dir/isomorphismtest.o -c /wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/test/isomorphismtest.cpp
[ 96%] Linking CXX executable ../bin/test_isomorphism
cd /wrkdirs/usr/ports/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_isomorphism.dir/link.txt --verbose=1
/nxb-bin/usr/bin/c++ -O2 -pipe -G0 -fno-strict-aliasing -O2 -pipe -G0 -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_isomorphism.dir/isomorphismtest.o -o ../bin/test_isomorphism ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/wrkdirs/usr/ports/science/openbabel/work/.build/lib
[ 96%] Built target test_isomorphism
/nxb-bin/usr/bin/make -f test/CMakeFiles/test_invalidsmarts.dir/build.make test/CMakeFiles/test_invalidsmarts.dir/depend
cd /wrkdirs/usr/ports/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2 /wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/test /wrkdirs/usr/ports/science/openbabel/work/.build /wrkdirs/usr/ports/science/openbabel/work/.build/test /wrkdirs/usr/ports/science/openbabel/work/.build/test/CMakeFiles/test_invalidsmarts.dir/DependInfo.cmake
Scanning dependencies of target test_invalidsmarts
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[ 96%] Building CXX object test/CMakeFiles/test_invalidsmarts.dir/invalidsmarts.o
cd /wrkdirs/usr/ports/science/openbabel/work/.build/test && /nxb-bin/usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -I/wrkdirs/usr/ports/science/openbabel/work/.build/include -I/wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/data -I/wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -O2 -pipe -G0 -fno-strict-aliasing -O2 -pipe -G0 -fno-strict-aliasing -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/wrkdirs/usr/ports/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_invalidsmarts.dir/invalidsmarts.o -c /wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/test/invalidsmarts.cpp
[ 97%] Linking CXX executable ../bin/test_invalidsmarts
cd /wrkdirs/usr/ports/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_invalidsmarts.dir/link.txt --verbose=1
/nxb-bin/usr/bin/c++ -O2 -pipe -G0 -fno-strict-aliasing -O2 -pipe -G0 -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_invalidsmarts.dir/invalidsmarts.o -o ../bin/test_invalidsmarts ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/wrkdirs/usr/ports/science/openbabel/work/.build/lib
[ 97%] Built target test_invalidsmarts
/nxb-bin/usr/bin/make -f test/CMakeFiles/test_implicitH.dir/build.make test/CMakeFiles/test_implicitH.dir/depend
cd /wrkdirs/usr/ports/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2 /wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/test /wrkdirs/usr/ports/science/openbabel/work/.build /wrkdirs/usr/ports/science/openbabel/work/.build/test /wrkdirs/usr/ports/science/openbabel/work/.build/test/CMakeFiles/test_implicitH.dir/DependInfo.cmake
Scanning dependencies of target test_implicitH
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[ 97%] Building CXX object test/CMakeFiles/test_implicitH.dir/implicitHtest.o
cd /wrkdirs/usr/ports/science/openbabel/work/.build/test && /nxb-bin/usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -I/wrkdirs/usr/ports/science/openbabel/work/.build/include -I/wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/data -I/wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -O2 -pipe -G0 -fno-strict-aliasing -O2 -pipe -G0 -fno-strict-aliasing -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/wrkdirs/usr/ports/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_implicitH.dir/implicitHtest.o -c /wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/test/implicitHtest.cpp
[ 97%] Linking CXX executable ../bin/test_implicitH
cd /wrkdirs/usr/ports/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_implicitH.dir/link.txt --verbose=1
/nxb-bin/usr/bin/c++ -O2 -pipe -G0 -fno-strict-aliasing -O2 -pipe -G0 -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_implicitH.dir/implicitHtest.o -o ../bin/test_implicitH ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/wrkdirs/usr/ports/science/openbabel/work/.build/lib
[ 97%] Built target test_implicitH
/nxb-bin/usr/bin/make -f test/CMakeFiles/test_invalidsmiles.dir/build.make test/CMakeFiles/test_invalidsmiles.dir/depend
cd /wrkdirs/usr/ports/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2 /wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/test /wrkdirs/usr/ports/science/openbabel/work/.build /wrkdirs/usr/ports/science/openbabel/work/.build/test /wrkdirs/usr/ports/science/openbabel/work/.build/test/CMakeFiles/test_invalidsmiles.dir/DependInfo.cmake
Scanning dependencies of target test_invalidsmiles
/nxb-bin/usr/bin/make -f test/CMakeFiles/test_invalidsmiles.dir/build.make test/CMakeFiles/test_invalidsmiles.dir/build
[ 97%] Building CXX object test/CMakeFiles/test_invalidsmiles.dir/invalidsmiles.o
cd /wrkdirs/usr/ports/science/openbabel/work/.build/test && /nxb-bin/usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -I/wrkdirs/usr/ports/science/openbabel/work/.build/include -I/wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/data -I/wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -O2 -pipe -G0 -fno-strict-aliasing -O2 -pipe -G0 -fno-strict-aliasing -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/wrkdirs/usr/ports/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_invalidsmiles.dir/invalidsmiles.o -c /wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/test/invalidsmiles.cpp
[ 97%] Linking CXX executable ../bin/test_invalidsmiles
cd /wrkdirs/usr/ports/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_invalidsmiles.dir/link.txt --verbose=1
/nxb-bin/usr/bin/c++ -O2 -pipe -G0 -fno-strict-aliasing -O2 -pipe -G0 -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_invalidsmiles.dir/invalidsmiles.o -o ../bin/test_invalidsmiles ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/wrkdirs/usr/ports/science/openbabel/work/.build/lib
[ 97%] Built target test_invalidsmiles
/nxb-bin/usr/bin/make -f test/CMakeFiles/test_smartsparse.dir/build.make test/CMakeFiles/test_smartsparse.dir/depend
cd /wrkdirs/usr/ports/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2 /wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/test /wrkdirs/usr/ports/science/openbabel/work/.build /wrkdirs/usr/ports/science/openbabel/work/.build/test /wrkdirs/usr/ports/science/openbabel/work/.build/test/CMakeFiles/test_smartsparse.dir/DependInfo.cmake
Scanning dependencies of target test_smartsparse
/nxb-bin/usr/bin/make -f test/CMakeFiles/test_smartsparse.dir/build.make test/CMakeFiles/test_smartsparse.dir/build
[ 98%] Building CXX object test/CMakeFiles/test_smartsparse.dir/smartsparse.o
cd /wrkdirs/usr/ports/science/openbabel/work/.build/test && /nxb-bin/usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -I/wrkdirs/usr/ports/science/openbabel/work/.build/include -I/wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/data -I/wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -O2 -pipe -G0 -fno-strict-aliasing -O2 -pipe -G0 -fno-strict-aliasing -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/wrkdirs/usr/ports/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_smartsparse.dir/smartsparse.o -c /wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/test/smartsparse.cpp
[ 98%] Linking CXX executable ../bin/test_smartsparse
cd /wrkdirs/usr/ports/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_smartsparse.dir/link.txt --verbose=1
/nxb-bin/usr/bin/c++ -O2 -pipe -G0 -fno-strict-aliasing -O2 -pipe -G0 -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_smartsparse.dir/smartsparse.o -o ../bin/test_smartsparse ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/wrkdirs/usr/ports/science/openbabel/work/.build/lib
[ 98%] Built target test_smartsparse
/nxb-bin/usr/bin/make -f test/CMakeFiles/test_cansmi.dir/build.make test/CMakeFiles/test_cansmi.dir/depend
cd /wrkdirs/usr/ports/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2 /wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/test /wrkdirs/usr/ports/science/openbabel/work/.build /wrkdirs/usr/ports/science/openbabel/work/.build/test /wrkdirs/usr/ports/science/openbabel/work/.build/test/CMakeFiles/test_cansmi.dir/DependInfo.cmake
Scanning dependencies of target test_cansmi
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[ 98%] Building CXX object test/CMakeFiles/test_cansmi.dir/cansmi.o
cd /wrkdirs/usr/ports/science/openbabel/work/.build/test && /nxb-bin/usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -I/wrkdirs/usr/ports/science/openbabel/work/.build/include -I/wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/data -I/wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -O2 -pipe -G0 -fno-strict-aliasing -O2 -pipe -G0 -fno-strict-aliasing -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/wrkdirs/usr/ports/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_cansmi.dir/cansmi.o -c /wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/test/cansmi.cpp
[ 99%] Linking CXX executable ../bin/test_cansmi
cd /wrkdirs/usr/ports/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_cansmi.dir/link.txt --verbose=1
/nxb-bin/usr/bin/c++ -O2 -pipe -G0 -fno-strict-aliasing -O2 -pipe -G0 -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_cansmi.dir/cansmi.o -o ../bin/test_cansmi ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/wrkdirs/usr/ports/science/openbabel/work/.build/lib
[ 99%] Built target test_cansmi
/nxb-bin/usr/bin/make -f test/CMakeFiles/test_charge-mmff94.dir/build.make test/CMakeFiles/test_charge-mmff94.dir/depend
cd /wrkdirs/usr/ports/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2 /wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/test /wrkdirs/usr/ports/science/openbabel/work/.build /wrkdirs/usr/ports/science/openbabel/work/.build/test /wrkdirs/usr/ports/science/openbabel/work/.build/test/CMakeFiles/test_charge-mmff94.dir/DependInfo.cmake
Scanning dependencies of target test_charge-mmff94
/nxb-bin/usr/bin/make -f test/CMakeFiles/test_charge-mmff94.dir/build.make test/CMakeFiles/test_charge-mmff94.dir/build
[ 99%] Building CXX object test/CMakeFiles/test_charge-mmff94.dir/charge-mmff94.o
cd /wrkdirs/usr/ports/science/openbabel/work/.build/test && /nxb-bin/usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -I/wrkdirs/usr/ports/science/openbabel/work/.build/include -I/wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/data -I/wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -O2 -pipe -G0 -fno-strict-aliasing -O2 -pipe -G0 -fno-strict-aliasing -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/wrkdirs/usr/ports/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_charge-mmff94.dir/charge-mmff94.o -c /wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/test/charge-mmff94.cpp
[ 99%] Linking CXX executable ../bin/test_charge-mmff94
cd /wrkdirs/usr/ports/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_charge-mmff94.dir/link.txt --verbose=1
/nxb-bin/usr/bin/c++ -O2 -pipe -G0 -fno-strict-aliasing -O2 -pipe -G0 -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_charge-mmff94.dir/charge-mmff94.o -o ../bin/test_charge-mmff94 ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/wrkdirs/usr/ports/science/openbabel/work/.build/lib
[ 99%] Built target test_charge-mmff94
/nxb-bin/usr/bin/make -f test/CMakeFiles/test_graphsym.dir/build.make test/CMakeFiles/test_graphsym.dir/depend
cd /wrkdirs/usr/ports/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2 /wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/test /wrkdirs/usr/ports/science/openbabel/work/.build /wrkdirs/usr/ports/science/openbabel/work/.build/test /wrkdirs/usr/ports/science/openbabel/work/.build/test/CMakeFiles/test_graphsym.dir/DependInfo.cmake
Scanning dependencies of target test_graphsym
/nxb-bin/usr/bin/make -f test/CMakeFiles/test_graphsym.dir/build.make test/CMakeFiles/test_graphsym.dir/build
[100%] Building CXX object test/CMakeFiles/test_graphsym.dir/graphsymtest.o
cd /wrkdirs/usr/ports/science/openbabel/work/.build/test && /nxb-bin/usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -I/wrkdirs/usr/ports/science/openbabel/work/.build/include -I/wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/data -I/wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -O2 -pipe -G0 -fno-strict-aliasing -O2 -pipe -G0 -fno-strict-aliasing -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -DTESTDATADIR="\"/wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/wrkdirs/usr/ports/science/openbabel/work/.build/lib/\"" -o CMakeFiles/test_graphsym.dir/graphsymtest.o -c /wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/test/graphsymtest.cpp
[100%] Linking CXX executable ../bin/test_graphsym
cd /wrkdirs/usr/ports/science/openbabel/work/.build/test && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/test_graphsym.dir/link.txt --verbose=1
/nxb-bin/usr/bin/c++ -O2 -pipe -G0 -fno-strict-aliasing -O2 -pipe -G0 -fno-strict-aliasing -O2 -DNDEBUG CMakeFiles/test_graphsym.dir/graphsymtest.o -o ../bin/test_graphsym ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/wrkdirs/usr/ports/science/openbabel/work/.build/lib
[100%] Built target test_graphsym
/nxb-bin/usr/bin/make -f scripts/CMakeFiles/bindings_python.dir/build.make scripts/CMakeFiles/bindings_python.dir/depend
cd /wrkdirs/usr/ports/science/openbabel/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2 /wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/scripts /wrkdirs/usr/ports/science/openbabel/work/.build /wrkdirs/usr/ports/science/openbabel/work/.build/scripts /wrkdirs/usr/ports/science/openbabel/work/.build/scripts/CMakeFiles/bindings_python.dir/DependInfo.cmake
Scanning dependencies of target bindings_python
/nxb-bin/usr/bin/make -f scripts/CMakeFiles/bindings_python.dir/build.make scripts/CMakeFiles/bindings_python.dir/build
[100%] Building CXX object scripts/CMakeFiles/bindings_python.dir/python/openbabel-python.cpp.o
cd /wrkdirs/usr/ports/science/openbabel/work/.build/scripts && /nxb-bin/usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DUSING_DYNAMIC_LIBS -Dbindings_python_EXPORTS -I/wrkdirs/usr/ports/science/openbabel/work/.build/include -I/wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/data -I/wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -I/usr/local/include/python2.7 -O2 -pipe -G0 -fno-strict-aliasing -O2 -pipe -G0 -fno-strict-aliasing -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -o CMakeFiles/bindings_python.dir/python/openbabel-python.cpp.o -c /wrkdirs/usr/ports/science/openbabel/work/openbabel-2.3.2/scripts/python/openbabel-python.cpp
[100%] Linking CXX shared module ../lib/_openbabel.so
cd /wrkdirs/usr/ports/science/openbabel/work/.build/scripts && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/bindings_python.dir/link.txt --verbose=1
/nxb-bin/usr/bin/c++ -fPIC -O2 -pipe -G0 -fno-strict-aliasing -O2 -pipe -G0 -fno-strict-aliasing -O2 -DNDEBUG -shared -o ../lib/_openbabel.so CMakeFiles/bindings_python.dir/python/openbabel-python.cpp.o /usr/local/lib/libpython2.7.so ../lib/libopenbabel.so.4.0.2 -lm -lz -Wl,-rpath,/usr/local/lib:/wrkdirs/usr/ports/science/openbabel/work/.build/lib:
CMakeFiles/bindings_python.dir/python/openbabel-python.cpp.o: In function `SWIG_Python_ErrorType(int)':
openbabel-python.cpp:(.text+0x204): relocation truncated to fit: R_MIPS_GOT_DISP against `PyExc_RuntimeError'
openbabel-python.cpp:(.text+0x240): relocation truncated to fit: R_MIPS_GOT_DISP against `PyExc_IOError'
openbabel-python.cpp:(.text+0x24c): relocation truncated to fit: R_MIPS_GOT_DISP against `PyExc_MemoryError'
openbabel-python.cpp:(.text+0x258): relocation truncated to fit: R_MIPS_GOT_DISP against `PyExc_AttributeError'
openbabel-python.cpp:(.text+0x264): relocation truncated to fit: R_MIPS_GOT_DISP against `PyExc_SystemError'
openbabel-python.cpp:(.text+0x270): relocation truncated to fit: R_MIPS_GOT_DISP against `PyExc_ValueError'
openbabel-python.cpp:(.text+0x27c): relocation truncated to fit: R_MIPS_GOT_DISP against `PyExc_SyntaxError'
openbabel-python.cpp:(.text+0x288): relocation truncated to fit: R_MIPS_GOT_DISP against `PyExc_OverflowError'
openbabel-python.cpp:(.text+0x294): relocation truncated to fit: R_MIPS_GOT_DISP against `PyExc_ZeroDivisionError'
openbabel-python.cpp:(.text+0x2a0): relocation truncated to fit: R_MIPS_GOT_DISP against `PyExc_TypeError'
openbabel-python.cpp:(.text+0x2ac): additional relocation overflows omitted from the output
*** Error code 1
Stop.
make[3]: stopped in /wrkdirs/usr/ports/science/openbabel/work/.build
*** Error code 1
Stop.
make[2]: stopped in /wrkdirs/usr/ports/science/openbabel/work/.build
*** Error code 1
Stop.
make[1]: stopped in /wrkdirs/usr/ports/science/openbabel/work/.build
*** Error code 1
Stop.
make: stopped in /usr/ports/science/openbabel
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