[package - head-armv6-default][science/hdf] Failed for hdf-4.2.11, 1 in build
pkg-fallout at FreeBSD.org
pkg-fallout at FreeBSD.org
Fri Jan 22 08:01:55 UTC 2016
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.
Maintainer: ports at FreeBSD.org
Last committer: danfe at FreeBSD.org
Ident: $FreeBSD: head/science/hdf/Makefile 396586 2015-09-10 16:55:41Z danfe $
Log URL: http://beefy8.nyi.freebsd.org/data/head-armv6-default/p406714_s293048/logs/hdf-4.2.11,1.log
Build URL: http://beefy8.nyi.freebsd.org/build.html?mastername=head-armv6-default&build=p406714_s293048
Log:
====>> Building science/hdf
build started at Fri Jan 22 08:00:15 UTC 2016
port directory: /usr/ports/science/hdf
building for: FreeBSD head-armv6-default-job-09 11.0-CURRENT FreeBSD 11.0-CURRENT r293048 arm
maintained by: ports at FreeBSD.org
Makefile ident: $FreeBSD: head/science/hdf/Makefile 396586 2015-09-10 16:55:41Z danfe $
Poudriere version: 3.1.10
Host OSVERSION: 1100091
Jail OSVERSION: 1100093
!!! Jail is newer than host. (Jail: 1100093, Host: 1100091) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!
---Begin Environment---
SHELL=/bin/csh
UNAME_p=armv6
UNAME_m=arm
ABI_FILE=/usr/lib/crt1.o
UNAME_v=FreeBSD 11.0-CURRENT r293048
UNAME_r=11.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
OPSYS=FreeBSD
ARCH=armv6
LINUX_OSRELEASE=2.6.32
SAVED_TERM=screen
QEMU_EMULATING=1
MASTERMNT=/usr/local/poudriere/data/.m/head-armv6-default/ref
UID=0
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
_JAVA_VERSION_LIST_REGEXP=1.6\|1.7\|1.8\|1.6+\|1.7+\|1.8+
POUDRIERE_BUILD_TYPE=bulk
PKGNAME=hdf-4.2.11,1
OSREL=11.0
_OSRELEASE=11.0-CURRENT
PYTHONBASE=/usr/local
OLDPWD=/
_SMP_CPUS=24
PWD=/usr/local/poudriere/data/.m/head-armv6-default/ref/.p/pool
MASTERNAME=head-armv6-default
SCRIPTPREFIX=/usr/local/share/poudriere
_JAVA_VENDOR_LIST_REGEXP=openjdk\|oracle\|sun
USER=root
HOME=/root
POUDRIERE_VERSION=3.1.10
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
CONFIGURE_MAX_CMD_LEN=262144
LIBEXECPREFIX=/usr/local/libexec/poudriere
LOCALBASE=/usr/local
PACKAGE_BUILDING=yes
_JAVA_OS_LIST_REGEXP=native\|linux
OSVERSION=1100093
---End Environment---
---Begin OPTIONS List---
===> The following configuration options are available for hdf-4.2.11,1:
EXAMPLES=on: Build and/or install examples
===> Use 'make config' to modify these settings
---End OPTIONS List---
--CONFIGURE_ARGS--
--enable-shared --with-jpeg=/usr/local --with-szlib=/usr/local --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--
--CONFIGURE_ENV--
F77="gfortran48" FC="gfortran48" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc48" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc48" XDG_DATA_HOME=/wrkdirs/usr/ports/science/hdf/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/hdf/work HOME=/wrkdirs/usr/ports/science/hdf/work TMPDIR="/tmp" SHELL=/bin/sh CONFIG_SHELL=/bin/sh ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--
--MAKE_ENV--
F77="gfortran48" FC="gfortran48" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc48" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc48" XDG_DATA_HOME=/wrkdirs/usr/ports/science/hdf/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/hdf/work HOME=/wrkdirs/usr/ports/science/hdf/work TMPDIR="/tmp" NO_PIE=yes NO_DEBUG_FILES=yes SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local LOCALBASE=/usr/local LIBDIR="/usr/lib" CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -mfloat-abi=softfp -fno-strict-aliasing" CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS="" LDFLAGS=" -Wl,-rpath=/usr/local/lib/gcc48 -L/usr/local/lib/gcc48 -B/usr/local/bin" LIBS="" CXX=
"/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -mfloat-abi=softfp -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 444" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444"
--End MAKE_ENV--
--PLIST_SUB--
OSREL=11.0
PREFIX=%D
LOCALBASE=/usr/local
RESETPREFIX=/usr/local
PORTDOCS=""
PORTEXAMPLES=""
LIB32DIR=lib
DOCSDIR="share/doc/hdf"
EXAMPLESDIR="share/examples/hdf"
DATADIR="share/hdf"
WWWDIR="www/hdf"
ETCDIR="etc/hdf"
--End PLIST_SUB--
--SUB_LIST--
PREFIX=/usr/local
LOCALBASE=/usr/local
DATADIR=/usr/local/share/hdf
DOCSDIR=/usr/local/share/doc/hdf
EXAMPLESDIR=/usr/local/share/examples/hdf
WWWDIR=/usr/local/www/hdf
ETCDIR=/usr/local/etc/hdf
--End SUB_LIST--
---Begin make.conf---
CC=/nxb-bin/usr/bin/cc
CPP=/nxb-bin/usr/bin/cpp
CXX=/nxb-bin/usr/bin/c++
AS=/nxb-bin/usr/bin/as
NM=/nxb-bin/usr/bin/nm
LD=/nxb-bin/usr/bin/ld
OBJCOPY=/nxb-bin/usr/bin/objcopy
SIZE=/nxb-bin/usr/bin/size
STRIPBIN=/nxb-bin/usr/bin/strip
SED=/nxb-bin/usr/bin/sed
READELF=/nxb-bin/usr/bin/readelf
RANLIB=/nxb-bin/usr/bin/ranlib
YACC=/nxb-bin/usr/bin/yacc
NM=/nxb-bin/usr/bin/nm
MAKE=/nxb-bin/usr/bin/make
STRINGS=/nxb-bin/usr/bin/strings
AWK=/nxb-bin/usr/bin/awk
FLEX=/nxb-bin/usr/bin/flex
CC=/nxb-bin/usr/bin/cc
CPP=/nxb-bin/usr/bin/cpp
CXX=/nxb-bin/usr/bin/c++
AS=/nxb-bin/usr/bin/as
NM=/nxb-bin/usr/bin/nm
LD=/nxb-bin/usr/bin/ld
OBJCOPY=/nxb-bin/usr/bin/objcopy
SIZE=/nxb-bin/usr/bin/size
STRIPBIN=/nxb-bin/usr/bin/strip
SED=/nxb-bin/usr/bin/sed
READELF=/nxb-bin/usr/bin/readelf
RANLIB=/nxb-bin/usr/bin/ranlib
YACC=/nxb-bin/usr/bin/yacc
NM=/nxb-bin/usr/bin/nm
MAKE=/nxb-bin/usr/bin/make
STRINGS=/nxb-bin/usr/bin/strings
AWK=/nxb-bin/usr/bin/awk
FLEX=/nxb-bin/usr/bin/flex
CC=/nxb-bin/usr/bin/cc
CPP=/nxb-bin/usr/bin/cpp
CXX=/nxb-bin/usr/bin/c++
AS=/nxb-bin/usr/bin/as
NM=/nxb-bin/usr/bin/nm
LD=/nxb-bin/usr/bin/ld
OBJCOPY=/nxb-bin/usr/bin/objcopy
SIZE=/nxb-bin/usr/bin/size
STRIPBIN=/nxb-bin/usr/bin/strip
SED=/nxb-bin/usr/bin/sed
READELF=/nxb-bin/usr/bin/readelf
RANLIB=/nxb-bin/usr/bin/ranlib
YACC=/nxb-bin/usr/bin/yacc
NM=/nxb-bin/usr/bin/nm
MAKE=/nxb-bin/usr/bin/make
STRINGS=/nxb-bin/usr/bin/strings
AWK=/nxb-bin/usr/bin/awk
FLEX=/nxb-bin/usr/bin/flex
CC=/nxb-bin/usr/bin/cc
CPP=/nxb-bin/usr/bin/cpp
CXX=/nxb-bin/usr/bin/c++
AS=/nxb-bin/usr/bin/as
NM=/nxb-bin/usr/bin/nm
LD=/nxb-bin/usr/bin/ld
OBJCOPY=/nxb-bin/usr/bin/objcopy
SIZE=/nxb-bin/usr/bin/size
STRIPBIN=/nxb-bin/usr/bin/strip
SED=/nxb-bin/usr/bin/sed
READELF=/nxb-bin/usr/bin/readelf
RANLIB=/nxb-bin/usr/bin/ranlib
YACC=/nxb-bin/usr/bin/yacc
NM=/nxb-bin/usr/bin/nm
MAKE=/nxb-bin/usr/bin/make
STRINGS=/nxb-bin/usr/bin/strings
AWK=/nxb-bin/usr/bin/awk
FLEX=/nxb-bin/usr/bin/flex
CC=/nxb-bin/usr/bin/cc
CPP=/nxb-bin/usr/bin/cpp
CXX=/nxb-bin/usr/bin/c++
AS=/nxb-bin/usr/bin/as
NM=/nxb-bin/usr/bin/nm
LD=/nxb-bin/usr/bin/ld
OBJCOPY=/nxb-bin/usr/bin/objcopy
SIZE=/nxb-bin/usr/bin/size
STRIPBIN=/nxb-bin/usr/bin/strip
SED=/nxb-bin/usr/bin/sed
READELF=/nxb-bin/usr/bin/readelf
RANLIB=/nxb-bin/usr/bin/ranlib
YACC=/nxb-bin/usr/bin/yacc
NM=/nxb-bin/usr/bin/nm
MAKE=/nxb-bin/usr/bin/make
STRINGS=/nxb-bin/usr/bin/strings
AWK=/nxb-bin/usr/bin/awk
FLEX=/nxb-bin/usr/bin/flex
CC=/nxb-bin/usr/bin/cc
CPP=/nxb-bin/usr/bin/cpp
CXX=/nxb-bin/usr/bin/c++
<snip>
checking for ANSI C header files... (cached) yes
checking whether /nxb-bin/usr/bin/cc and cc understand -c and -o together... yes
checking how to run the C++ preprocessor... /nxb-bin/usr/bin/c++ -E
checking whether gfortran48 understands -c and -o together... yes
checking size of int*... 4
checking whether byte ordering is bigendian... no
checking for build mode... production
checking for math library support... yes
checking for fork... (cached) yes
checking for system... yes
checking for vfork... (cached) yes
checking for wait... yes
checking if deprecated public symbols are available... yes
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating libhdf4.settings
config.status: creating hdf/Makefile
config.status: creating hdf/examples/Makefile
config.status: creating hdf/fortran/Makefile
config.status: creating hdf/fortran/examples/Makefile
config.status: creating hdf/src/Makefile
config.status: creating hdf/test/Makefile
config.status: creating hdf/util/Makefile
config.status: creating hdf/util/h4cc
config.status: creating hdf/util/h4fc
config.status: creating hdf/util/h4redeploy
config.status: creating hdf/util/testutil.sh
config.status: creating man/Makefile
config.status: creating mfhdf/fortran/ftest.f
config.status: creating mfhdf/fortran/jackets.c
config.status: creating mfhdf/fortran/netcdf.inc
config.status: creating mfhdf/libsrc/netcdf.h
config.status: creating mfhdf/Makefile
config.status: creating mfhdf/dumper/Makefile
config.status: creating mfhdf/dumper/testhdp.sh
config.status: creating mfhdf/examples/Makefile
config.status: creating mfhdf/examples/testexamples.sh
config.status: creating mfhdf/fortran/Makefile
config.status: creating mfhdf/fortran/examples/Makefile
config.status: creating mfhdf/fortran/testfortran.sh
config.status: creating mfhdf/hdfimport/Makefile
config.status: creating mfhdf/hdfimport/testutil.sh
config.status: creating mfhdf/hdiff/Makefile
config.status: creating mfhdf/hdiff/testhdiff.sh
config.status: creating mfhdf/hrepack/Makefile
config.status: creating mfhdf/hrepack/hrepack.sh
config.status: creating mfhdf/hrepack/hrepack_all.sh
config.status: creating mfhdf/libsrc/Makefile
config.status: creating mfhdf/ncdump/Makefile
config.status: creating mfhdf/ncdump/testncdump.sh
config.status: creating mfhdf/ncgen/Makefile
config.status: creating mfhdf/ncgen/testncgen.sh
config.status: creating mfhdf/nctest/Makefile
config.status: creating mfhdf/test/Makefile
config.status: creating mfhdf/test/testmfhdf.sh
config.status: creating mfhdf/xdr/Makefile
config.status: creating hdf/src/h4config.h
config.status: executing h4config commands
modifying hdf/src/h4config.h
Post process libhdf4.settings
config.status: executing depfiles commands
config.status: executing libtool commands
SUMMARY OF THE HDF4 CONFIGURATION
=================================
General Information:
-------------------
HDF4 Version: 4.2.11
Configured on: Fri Jan 22 08:01:46 UTC 2016
Configured by: root at head-armv6-default-job-09
Configure mode: production
Host system: armv6-portbld-freebsd11.0
Uname information: FreeBSD head-armv6-default-job-09 11.0-CURRENT FreeBSD 11.0-CURRENT r293048 arm
Libraries:
Installation point: /usr/local
Compiling Options:
------------------
Compilation Mode: production
C compiler: /nxb-bin/usr/bin/cc
CFLAGS: -O2 -pipe -mfloat-abi=softfp -fno-strict-aliasing -ansi
CPPFLAGS: -I/usr/local/include -I/usr/local/include -DSWAP
Shared Libraries: yes
Static Libraries: yes
Statically Linked Executables: no
LDFLAGS: -Wl,-rpath=/usr/local/lib/gcc48 -L/usr/local/lib/gcc48 -B/usr/local/bin -L/usr/local/lib -L/usr/local/lib
Extra libraries: -lsz -ljpeg -lz
Archiver: /usr/local/bin/ar
Ranlib: /usr/local/bin/ranlib
Languages:
----------
Fortran: yes
Fortran Compiler: /usr/local/bin/gfortran48
FFLAGS: -O -Wl,-rpath=/usr/local/lib/gcc48
Features:
---------
SZIP compression: enabled with encoder
Support for netCDF API 2.3.2: yes
===========================================================================
=======================<phase: build >============================
===> Building for hdf-4.2.11,1
Making all in hdf
Making all in src
/nxb-bin/usr/bin/make all-am
/bin/sh ../../libtool --tag=CC --mode=compile /nxb-bin/usr/bin/cc -DHAVE_CONFIG_H -I. -I/usr/local/include -I/usr/local/include -DSWAP -O2 -pipe -mfloat-abi=softfp -fno-strict-aliasing -ansi -MT atom.lo -MD -MP -MF .deps/atom.Tpo -c -o atom.lo atom.c
libtool: compile: /nxb-bin/usr/bin/cc -DHAVE_CONFIG_H -I. -I/usr/local/include -I/usr/local/include -DSWAP -O2 -pipe -mfloat-abi=softfp -fno-strict-aliasing -ansi -MT atom.lo -MD -MP -MF .deps/atom.Tpo -c atom.c -fPIC -DPIC -o .libs/atom.o
In file included from atom.c:64:
In file included from ./hdf.h:20:
./hdfi.h:1115:1: error: unknown type name 'No'
No machine type has been defined. Your Makefile needs to have someing like
^
./hdfi.h:1115:11: error: expected ';' after top level declarator
No machine type has been defined. Your Makefile needs to have someing like
^
;
In file included from atom.c:64:
./hdf.h:142:9: error: unknown type name 'int32'
typedef int32 HFILEID;
^
./hdf.h:144:16: warning: declaration specifier missing, defaulting to 'int'
typedef intn (*hdf_termfunc_t)(void); /* termination function typedef */
^
int
./hdf.h:144:14: error: function cannot return function type 'int (void)'
typedef intn (*hdf_termfunc_t)(void); /* termination function typedef */
^
In file included from atom.c:64:
In file included from ./hdf.h:151:
./hbitio.h:35:7: error: unknown type name 'int32'
int32 acc_id; /* Access ID for H layer I/O routines */
^
./hbitio.h:36:7: error: unknown type name 'int32'
int32 bit_id; /* Bitfile ID for internal use */
^
./hbitio.h:39:7: error: unknown type name 'int32'
int32 block_offset, /* offset of the current buffered block in the dataset */
^
./hbitio.h:45:7: error: unknown type name 'uint8'
uint8 access; /* What the access on this file is ('r', 'w', etc..) */
^
./hbitio.h:46:7: error: unknown type name 'uint8'
uint8 mode; /* how are we interacting with the data now ('r', 'w', etc) */
^
./hbitio.h:47:7: error: unknown type name 'uint8'
uint8 bits; /* extra bit buffer, 0..BITNUM-1 bits */
^
./hbitio.h:48:7: error: unknown type name 'uint8'
uint8 *bytep; /* current position in buffer */
^
./hbitio.h:49:7: error: unknown type name 'uint8'
uint8 *bytez; /* end of buffer to compare */
^
./hbitio.h:50:7: error: unknown type name 'uint8'
uint8 *bytea; /* byte buffer */
^
./hbitio.h:43:18: error: field 'count' declared as a function
intn count, /* bit count to next boundary */
^
./hbitio.h:44:18: error: field 'buf_read' declared as a function
buf_read; /* number of bytes read into buffer (necessary for random I/O) */
^
./hbitio.h:57:7: error: unknown type name 'uint8'
const uint8 maskc[9]
^
./hbitio.h:67:7: error: unknown type name 'uint32'
const uint32 maskl[33]
^
In file included from atom.c:64:
In file included from ./hdf.h:152:
./hcomp.h:65:8: error: unknown type name 'uint16'
extern uint16 compress_map[];
^
./hcomp.h:89:13: error: unknown type name 'int32'
int32 nt; /* number type */
^
fatal error: too many errors emitted, stopping now [-ferror-limit=]
1 warning and 20 errors generated.
*** Error code 1
Stop.
make[4]: stopped in /wrkdirs/usr/ports/science/hdf/work/hdf-4.2.11/hdf/src
*** Error code 1
Stop.
make[3]: stopped in /wrkdirs/usr/ports/science/hdf/work/hdf-4.2.11/hdf/src
*** Error code 1
Stop.
make[2]: stopped in /wrkdirs/usr/ports/science/hdf/work/hdf-4.2.11/hdf
*** Error code 1
Stop.
make[1]: stopped in /wrkdirs/usr/ports/science/hdf/work/hdf-4.2.11
*** Error code 1
Stop.
make: stopped in /usr/ports/science/hdf
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