[package - 93i386-default][math/octave-forge-octgpr] Failed for octave-forge-octgpr-1.2.0_8 in build
pkg-fallout at FreeBSD.org
pkg-fallout at FreeBSD.org
Sun Jan 10 16:49:34 UTC 2016
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.
Maintainer: stephen at FreeBSD.org
Last committer: gerald at FreeBSD.org
Ident: $FreeBSD: head/math/octave-forge-octgpr/Makefile 367888 2014-09-10 20:50:31Z gerald $
Log URL: http://beefy1.nyi.freebsd.org/data/93i386-default/405662/logs/octave-forge-octgpr-1.2.0_8.log
Build URL: http://beefy1.nyi.freebsd.org/build.html?mastername=93i386-default&build=405662
Log:
====>> Building math/octave-forge-octgpr
build started at Sun Jan 10 16:48:08 UTC 2016
port directory: /usr/ports/math/octave-forge-octgpr
building for: FreeBSD 93i386-default-job-20 9.3-RELEASE-p32 FreeBSD 9.3-RELEASE-p32 i386
maintained by: stephen at FreeBSD.org
Makefile ident: $FreeBSD: head/math/octave-forge-octgpr/Makefile 367888 2014-09-10 20:50:31Z gerald $
Poudriere version: 3.1.10
Host OSVERSION: 1100091
Jail OSVERSION: 903000
---Begin Environment---
SHELL=/bin/csh
UNAME_p=i386
UNAME_m=i386
OSVERSION=903000
UNAME_v=FreeBSD 9.3-RELEASE-p32
UNAME_r=9.3-RELEASE-p32
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
SAVED_TERM=
MASTERMNT=/usr/local/poudriere/data/.m/93i386-default/ref
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/games:/usr/local/sbin:/usr/local/bin:/root/bin
POUDRIERE_BUILD_TYPE=bulk
PKGNAME=octave-forge-octgpr-1.2.0_8
OLDPWD=/
PWD=/usr/local/poudriere/data/.m/93i386-default/ref/.p/pool
MASTERNAME=93i386-default
SCRIPTPREFIX=/usr/local/share/poudriere
USER=root
HOME=/root
POUDRIERE_VERSION=3.1.10
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
LIBEXECPREFIX=/usr/local/libexec/poudriere
LOCALBASE=/usr/local
PACKAGE_BUILDING=yes
---End Environment---
---Begin OPTIONS List---
---End OPTIONS List---
--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--
--CONFIGURE_ENV--
F77="gfortran48" FC="gfortran48" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc48" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc48" MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/math/octave-forge-octgpr/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/math/octave-forge-octgpr/work HOME=/wrkdirs/usr/ports/math/octave-forge-octgpr/work TMPDIR="/tmp" SHELL=/bin/sh CONFIG_SHELL=/bin/sh ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--
--MAKE_ENV--
PACKAGE=/wrkdirs/usr/ports/math/octave-forge-octgpr/work/octgpr-1.2.0.tar.gz F77="gfortran48" FC="gfortran48" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc48" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc48" XDG_DATA_HOME=/wrkdirs/usr/ports/math/octave-forge-octgpr/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/math/octave-forge-octgpr/work HOME=/wrkdirs/usr/ports/math/octave-forge-octgpr/work TMPDIR="/tmp" NO_PIE=yes NO_DEBUG_FILES=yes SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local LOCALBASE=/usr/local LIBDIR="/usr/lib" CC="cc" CFLAGS="-O2 -pipe -fno-strict-aliasing" CPP="cpp" CPPFLAGS="" LDFLAGS=" -Wl,-rpath=/usr/local/lib
/gcc48 -L/usr/local/lib/gcc48 -B/usr/local/bin" LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fno-strict-aliasing" MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 444" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444"
--End MAKE_ENV--
--PLIST_SUB--
OSREL=9.3
PREFIX=%D
LOCALBASE=/usr/local
RESETPREFIX=/usr/local
PORTDOCS=""
PORTEXAMPLES=""
LIB32DIR=lib
DOCSDIR="share/doc/octave-forge-octgpr"
EXAMPLESDIR="share/examples/octave-forge-octgpr"
DATADIR="share/octave-forge-octgpr"
WWWDIR="www/octave-forge-octgpr"
ETCDIR="etc/octave-forge-octgpr"
--End PLIST_SUB--
--SUB_LIST--
PREFIX=/usr/local
LOCALBASE=/usr/local
DATADIR=/usr/local/share/octave-forge-octgpr
DOCSDIR=/usr/local/share/doc/octave-forge-octgpr
EXAMPLESDIR=/usr/local/share/examples/octave-forge-octgpr
WWWDIR=/usr/local/www/octave-forge-octgpr
ETCDIR=/usr/local/etc/octave-forge-octgpr
--End SUB_LIST--
---Begin make.conf---
MACHINE=i386
MACHINE_ARCH=i386
ARCH=${MACHINE_ARCH}
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
#### /usr/local/etc/poudriere.d/make.conf ####
DISABLE_MAKE_JOBS=poudriere
---End make.conf---
=======================<phase: check-sanity >============================
===> License GPLv2 accepted by the user
===========================================================================
=======================<phase: pkg-depends >============================
===> octave-forge-octgpr-1.2.0_8 depends on file: /usr/local/sbin/pkg - not found
===> Installing existing package /packages/All/pkg-1.6.2.txz
[93i386-default-job-20] Installing pkg-1.6.2...
[93i386-default-job-20] Extracting pkg-1.6.2: .......... done
Message from pkg-1.6.2:
If you are upgrading from the old package format, first run:
# pkg2ng
===> octave-forge-octgpr-1.2.0_8 depends on file: /usr/local/sbin/pkg - found
===> Returning to build of octave-forge-octgpr-1.2.0_8
===========================================================================
=======================<phase: fetch-depends >============================
===========================================================================
=======================<phase: fetch >============================
===> License GPLv2 accepted by the user
===> Fetching all distfiles required by octave-forge-octgpr-1.2.0_8 for building
===========================================================================
=======================<phase: checksum >============================
===> License GPLv2 accepted by the user
===> Fetching all distfiles required by octave-forge-octgpr-1.2.0_8 for building
=> SHA256 Checksum OK for octave-forge/octgpr-1.2.0.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract >============================
===> License GPLv2 accepted by the user
===> Fetching all distfiles required by octave-forge-octgpr-1.2.0_8 for building
===> Extracting for octave-forge-octgpr-1.2.0_8
=> SHA256 Checksum OK for octave-forge/octgpr-1.2.0.tar.gz.
===========================================================================
=======================<phase: patch-depends >============================
===========================================================================
=======================<phase: patch >============================
===> Patching for octave-forge-octgpr-1.2.0_8
===========================================================================
=======================<phase: build-depends >============================
===> octave-forge-octgpr-1.2.0_8 depends on executable: octave - not found
===> Installing existing package /packages/All/octave-4.0.0.txz
[93i386-default-job-20] Installing octave-4.0.0...
[93i386-default-job-20] `-- Installing glpk-4.52.1_3...
[93i386-default-job-20] | `-- Installing gmp-5.1.3_2...
[93i386-default-job-20] | | `-- Installing indexinfo-0.2.4...
[93i386-default-job-20] | | `-- Extracting indexinfo-0.2.4: .... done
[93i386-default-job-20] | `-- Extracting gmp-5.1.3_2: .......... done
[93i386-default-job-20] `-- Extracting glpk-4.52.1_3: .......... done
[93i386-default-job-20] `-- Installing fftw3-float-3.3.3_2...
[93i386-default-job-20] `-- Extracting fftw3-float-3.3.3_2: .......... done
[93i386-default-job-20] `-- Installing openblas-0.2.14,1...
[93i386-default-job-20] | `-- Installing gcc-4.8.5_2...
[93i386-default-job-20] | | `-- Installing mpc-1.0.3...
[93i386-default-job-20] | | `-- Installing mpfr-3.1.3...
[93i386-default-job-20] | | `-- Extracting mpfr-3.1.3: .......... done
[93i386-default-job-20] | | `-- Extracting mpc-1.0.3: ...... done
[93i386-default-job-20] | | `-- Installing gcc-ecj-4.5...
[93i386-default-job-20] | | `-- Extracting gcc-ecj-4.5: . done
[93i386-default-job-20] | | `-- Installing libiconv-1.14_9...
[93i386-default-job-20] | | `-- Extracting libiconv-1.14_9: .......... done
[93i386-default-job-20] | | `-- Installing binutils-2.25.1...
[93i386-default-job-20] | | `-- Installing gettext-runtime-0.19.6...
[93i386-default-job-20] | | `-- Extracting gettext-runtime-0.19.6: .......... done
[93i386-default-job-20] | | `-- Extracting binutils-2.25.1: .......... done
[93i386-default-job-20] | `-- Extracting gcc-4.8.5_2: .......... done
[93i386-default-job-20] `-- Extracting openblas-0.2.14,1: ......... done
[93i386-default-job-20] `-- Installing GraphicsMagick-1.3.23_2,1...
[93i386-default-job-20] | `-- Installing jbigkit-2.1_1...
[93i386-default-job-20] | `-- Extracting jbigkit-2.1_1: .......... done
[93i386-default-job-20] | `-- Installing jasper-1.900.1_15...
[93i386-default-job-20] | | `-- Installing jpeg-turbo-1.4.2...
[93i386-default-job-20] | | `-- Extracting jpeg-turbo-1.4.2: .......... done
[93i386-default-job-20] | `-- Extracting jasper-1.900.1_15: .......... done
[93i386-default-job-20] | `-- Installing libxml2-2.9.3...
[93i386-default-job-20] | `-- Extracting libxml2-2.9.3: .......... done
[93i386-default-job-20] | `-- Installing lcms2-2.7_2...
[93i386-default-job-20] | | `-- Installing tiff-4.0.6_1...
[93i386-default-job-20] | | `-- Extracting tiff-4.0.6_1: .......... done
[93i386-default-job-20] | `-- Extracting lcms2-2.7_2: .......... done
[93i386-default-job-20] | `-- Installing png-1.6.20...
[93i386-default-job-20] | `-- Extracting png-1.6.20: .......... done
[93i386-default-job-20] | `-- Installing libwmf-0.2.8.4_15...
[93i386-default-job-20] | | `-- Installing libX11-1.6.3,1...
[93i386-default-job-20] | | `-- Installing xproto-7.0.28...
[93i386-default-job-20] | | `-- Extracting xproto-7.0.28: .......... done
[93i386-default-job-20] | | `-- Installing kbproto-1.0.7...
[93i386-default-job-20] | | `-- Extracting kbproto-1.0.7: .......... done
[93i386-default-job-20] | | `-- Installing libXdmcp-1.1.2...
[93i386-default-job-20] | | `-- Extracting libXdmcp-1.1.2: ......... done
[93i386-default-job-20] | | `-- Installing libxcb-1.11.1...
[93i386-default-job-20] | | | `-- Installing libpthread-stubs-0.3_6...
[93i386-default-job-20] | | | `-- Extracting libpthread-stubs-0.3_6: ..... done
[93i386-default-job-20] | | | `-- Installing libXau-1.0.8_3...
[93i386-default-job-20] | | | `-- Extracting libXau-1.0.8_3: .......... done
[93i386-default-job-20] | | `-- Extracting libxcb-1.11.1: .......... done
[93i386-default-job-20] | | `-- Extracting libX11-1.6.3,1: .......... done
[93i386-default-job-20] | | `-- Installing freetype2-2.6.2...
[93i386-default-job-20] | | `-- Extracting freetype2-2.6.2: .......... done
[93i386-default-job-20] | `-- Extracting libwmf-0.2.8.4_15: .......... done
[93i386-default-job-20] | `-- Installing webp-0.4.4_1...
[93i386-default-job-20] | | `-- Installing giflib-5.1.1...
[93i386-default-job-20] | | `-- Extracting giflib-5.1.1: .......... done
[93i386-default-job-20] | `-- Extracting webp-0.4.4_1: .......... done
[93i386-default-job-20] | `-- Installing libXext-1.3.3_1,1...
[93i386-default-job-20] | | `-- Installing xextproto-7.3.0...
[93i386-default-job-20] | | `-- Extracting xextproto-7.3.0: .......... done
[93i386-default-job-20] | `-- Extracting libXext-1.3.3_1,1: .......... done
<snip>
*********************************** NOTE **********************************
This package installs symlinks to support root certificates discovery by
default for software that uses OpenSSL.
This enables SSL Certificate Verification by client software without manual
intervention.
If you prefer to do this manually, replace the following symlinks with
either an empty file or your site-local certificate bundle.
* /etc/ssl/cert.pem
* /usr/local/etc/ssl/cert.pem
* /usr/local/openssl/cert.pem
***************************************************************************
Message from python27-2.7.11_1:
===========================================================================
Note that some standard Python modules are provided as separate ports
as they require additional dependencies. They are available as:
bsddb databases/py-bsddb
gdbm databases/py-gdbm
sqlite3 databases/py-sqlite3
tkinter x11-toolkits/py-tkinter
===========================================================================
Message from perl5-5.20.3_8:
The /usr/bin/perl symlink has been removed starting with Perl 5.20.
For shebangs, you should either use:
#!/usr/local/bin/perl
or
#!/usr/bin/env perl
The first one will only work if you have a /usr/local/bin/perl,
the second will work as long as perl is in PATH.
Message from dejavu-2.35:
Make sure that the freetype module is loaded. If it is not, add the following
line to the "Modules" section of your X Windows configuration file:
Load "freetype"
Add the following line to the "Files" section of X Windows configuration file:
FontPath "/usr/local/share/fonts/dejavu/"
Note: your X Windows configuration file is typically /etc/X11/XF86Config
if you are using XFree86, and /etc/X11/xorg.conf if you are using X.Org.
Message from trousers-tddl-0.3.10_7:
To run tcsd automatically, add the following line to /etc/rc.conf
tcsd_enable="YES"
You might want to edit /usr/local/etc/tcsd.conf to reflect your setup.
To use TPM, add your_account to '_tss' group like following:
# pw groupadd _tss -m your_account
Message from openjdk8-8.66.17_3:
======================================================================
This OpenJDK implementation requires fdescfs(5) mounted on /dev/fd and
procfs(5) mounted on /proc.
If you have not done it yet, please do the following:
mount -t fdescfs fdesc /dev/fd
mount -t procfs proc /proc
To make it permanent, you need the following lines in /etc/fstab:
fdesc /dev/fd fdescfs rw 0 0
proc /proc procfs rw 0 0
======================================================================
Message from qt4-corelib-4.8.7_1:
======================================================================
Qt 4 can be built with optional support for:
- Common UNIX Printing System (CUPS) (enabled by default)
- Network Audio System (NAS)
- Qt style that renders using GTK (QGTKSTYLE)
In order to enable them, you have to add
QT4_OPTIONS= CUPS NAS QGTKSTYLE
to your /etc/make.conf and compile devel/qt4-corelib and
x11-toolkits/qt4-gui ports.
Attention! Whenever you change the QT4_OPTIONS both
devel/qt4-corelib and x11-toolkits/qt4-gui ports must be rebuilt!
======================================================================
Message from qt4-sql-4.8.7:
======================================================================
To enable Qt database support, install the database plugin ports. The
following plugin ports are available:
- databases/qt4-ibase-plugin InterBase/Firebird
- databases/qt4-mysql-plugin MySQL
- databases/qt4-odbc-plugin Open Database Connectivity
- databases/qt4-pgsql-plugin PostgreSQL
- databases/qt4-sqlite-plugin SQLite 2
- databases/qt4-sqlite3-plugin SQLite 3
======================================================================
===> octave-forge-octgpr-1.2.0_8 depends on executable: octave - found
===> Returning to build of octave-forge-octgpr-1.2.0_8
===> octave-forge-octgpr-1.2.0_8 depends on executable: gfortran48 - found
===> octave-forge-octgpr-1.2.0_8 depends on executable: gmake - not found
===> Installing existing package /packages/All/gmake-4.1_2.txz
[93i386-default-job-20] Installing gmake-4.1_2...
[93i386-default-job-20] Extracting gmake-4.1_2: .......... done
===> octave-forge-octgpr-1.2.0_8 depends on executable: gmake - found
===> Returning to build of octave-forge-octgpr-1.2.0_8
===> octave-forge-octgpr-1.2.0_8 depends on file: /usr/local/bin/as - found
===========================================================================
=======================<phase: lib-depends >============================
===> octave-forge-octgpr-1.2.0_8 depends on shared library: libpcre.so - found (/usr/local/lib/libpcre.so)
===========================================================================
=======================<phase: configure >============================
===> Configuring for octave-forge-octgpr-1.2.0_8
configure: loading site script /usr/ports/Templates/config.site
checking for mkoctfile... mkoctfile
checking for Fortran 77 compiler default output file name... a.out
checking whether the Fortran 77 compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables...
checking for suffix of object files... o
checking whether we are using the GNU Fortran 77 compiler... yes
checking whether gfortran48 accepts -g... yes
checking whether we are using the GNU C compiler... yes
checking whether cc accepts -g... yes
checking for cc option to accept ISO C89... none needed
checking how to run the C preprocessor... cpp
checking for grep that handles long lines and -e... (cached) /usr/bin/grep
checking for egrep... (cached) /usr/bin/egrep
checking for ANSI C header files... (cached) yes
checking for sys/types.h... (cached) yes
checking for sys/stat.h... (cached) yes
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
checking for memory.h... (cached) yes
checking for strings.h... (cached) yes
checking for inttypes.h... (cached) yes
checking for stdint.h... (cached) yes
checking for unistd.h... (cached) yes
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
checking for stdbool.h that conforms to C99... (cached) yes
checking for _Bool... (cached) yes
checking for an ANSI C-conforming const... yes
checking for error_at_line... no
checking for stdlib.h... (cached) yes
checking for GNU libc compatible malloc... (cached) yes
checking for fprintf... yes
checking for fflush... yes
checking how to get verbose linking output from gfortran48... -v
checking for Fortran 77 libraries of gfortran48... -L/usr/local/lib/gcc48 -L/usr/local/bin -L/usr/local/lib/gcc48/gcc/i386-portbld-freebsd9.3/4.8.5 -L/usr/local/lib/gcc48/gcc/i386-portbld-freebsd9.3/4.8.5/../../../../../i386-portbld-freebsd9.3/lib -L/usr/local/lib/gcc48/gcc/i386-portbld-freebsd9.3/4.8.5/../../.. -lgfortran -lm -lquadmath
checking for dummy main to link with Fortran 77 libraries... none
checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore
checking mkoctfile for $BLAS_LIBS... -L/usr/local/lib -lopenblasp
checking for library containing dtpsv... none required
checking for library containing dspr... none required
checking for library containing dpotrf... none required
checking for library containing dgeqr2... none required
checking for library containing dorm2r... none required
checking for library containing dtrtrs... none required
checking for library containing dpotri... none required
checking for library containing dsyev... none required
configure: creating ./config.status
config.status: creating Makefile
config.status: creating config.h
configure: creating ./config.status
config.status: creating Makefile
config.status: creating config.h
config.status: config.h is unchanged
"$prefix" is /usr/local
"$exec_prefix" is ${prefix}
find . -name NOINSTALL -print # shows which toolboxes won't be installed
===========================================================================
=======================<phase: build >============================
===> Building for octave-forge-octgpr-1.2.0_8
/usr/local/bin/mkoctfile -c gpr_train.cc
gpr_train.cc: In function 'octave_value_list Fgpr_train(const octave_value_list&, int)':
gpr_train.cc:316: error: 'Octave_map' was not declared in this scope
gpr_train.cc:316: error: expected `;' before 'GPM'
gpr_train.cc:319: error: 'GPM' was not declared in this scope
Makefile:49: recipe for target 'gpr_train.o' failed
gmake: *** [gpr_train.o] Error 1
*** [do-build] Error code 1
Stop in /usr/ports/math/octave-forge-octgpr.
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