[package - 91amd64-default-ssp][devel/py-tables] Failed for py27-tables-3.0.0_4 in configure

Sun Oct 5 04:03:34 UTC 2014

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer:     wen at FreeBSD.org
Last committer: gerald at FreeBSD.org
Ident:          $FreeBSD: head/devel/py-tables/Makefile 367888 2014-09-10 20:50:31Z gerald $
Log URL:        http://beefy4.isc.freebsd.org/data/91amd64-default-ssp/2014-10-04_20h26m52s/logs/py27-tables-3.0.0_4.log
Build URL:      http://beefy4.isc.freebsd.org/build.html?mastername=91amd64-default-ssp&build=2014-10-04_20h26m52s
Log:

====>> Building devel/py-tables
build started at Sun Oct  5 04:03:10 UTC 2014
port directory: /usr/ports/devel/py-tables
building for: FreeBSD pkg.FreeBSD.org 9.1-RELEASE-p13 FreeBSD 9.1-RELEASE-p13 amd64
maintained by: wen at FreeBSD.org
Makefile ident:      $FreeBSD: head/devel/py-tables/Makefile 367888 2014-09-10 20:50:31Z gerald $
Poudriere version: 3.1-pre
Host OSVERSION: 1100027
Jail OSVERSION: 901000

---Begin Environment---
OSVERSION=901000
UNAME_v=FreeBSD 9.1-RELEASE-p13
UNAME_r=9.1-RELEASE-p13
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
SAVED_TERM=
MASTERMNT=/usr/local/poudriere/data/.m/91amd64-default-ssp/ref
PKG_EXT=txz
FORCE_PACKAGE=yes
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/games:/usr/local/sbin:/usr/local/bin:/root/bin
POUDRIERE_BUILD_TYPE=bulk
PKGNG=1
PKGNAME=py27-tables-3.0.0_4
PKG_DELETE=/usr/local/sbin/pkg-static delete -y -f
PKG_ADD=/usr/local/sbin/pkg-static add
OLDPWD=/root
PWD=/usr/local/poudriere/data/.m/91amd64-default-ssp/ref/.p/pool
MASTERNAME=91amd64-default-ssp
USER=root
HOME=/root
POUDRIERE_VERSION=3.1-pre
LOCALBASE=/usr/local
PACKAGE_BUILDING=yes
PKG_VERSION=/.p/pkg-static version
PKG_BIN=/usr/local/sbin/pkg-static
---End Environment---

---Begin OPTIONS List---
===> The following configuration options are available for py27-tables-3.0.0_4:
     DOCS=on: Build and/or install documentation
     EXAMPLES=on: Build and/or install examples
     PYREX=off: Use code generated by Pyrex to build
===> Use 'make config' to modify these settings
---End OPTIONS List---

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/devel/py-tables/work  XDG_CONFIG_HOME=/wrkdirs/usr/ports/devel/py-tables/work  HOME=/wrkdirs/usr/ports/devel/py-tables/work TMPDIR="/tmp" XDG_DATA_HOME=/wrkdirs/usr/ports/devel/py-tables/work  XDG_CONFIG_HOME=/wrkdirs/usr/ports/devel/py-tables/work  HOME=/wrkdirs/usr/ports/devel/py-tables/work TMPDIR="/tmp" PYTHON="/usr/local/bin/python2.7" SHELL=/bin/sh CONFIG_SHELL=/bin/sh PATH=/usr/local/libexec/ccache:/sbin:/bin:/usr/sbin:/usr/bin:/usr/games:/usr/local/sbin:/usr/local/bin:/root/bin CCACHE_DIR="/root/.ccache"
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/devel/py-tables/work  XDG_CONFIG_HOME=/wrkdirs/usr/ports/devel/py-tables/work  HOME=/wrkdirs/usr/ports/devel/py-tables/work TMPDIR="/tmp" XDG_DATA_HOME=/wrkdirs/usr/ports/devel/py-tables/work  XDG_CONFIG_HOME=/wrkdirs/usr/ports/devel/py-tables/work  HOME=/wrkdirs/usr/ports/devel/py-tables/work TMPDIR="/tmp" NO_PIE=yes SHELL=/bin/sh NO_LINT=YES LDSHARED="cc -shared" PYTHONDONTWRITEBYTECODE= PYTHONOPTIMIZE= PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 -pipe -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector -fno-strict-aliasing"  MANPREFIX="/usr/local" PATH=/usr/local/libexec/ccache:/sbin:/bin:/usr/sbin:/usr/bin:/usr/games:/usr/local/sbin:/usr/local/bin:/root/bin CCACHE_DIR="/root/.ccache" BSD_INSTALL_PROGRAM="install  -s -o root -g wheel -m 555"  BSD_INSTALL_LIB="install  -s -o root -g wheel -m 444"  BSD_INSTALL_SCRIPT="
 install  -o root -g wheel -m 555"  BSD_INSTALL_DATA="install  -o root -g wheel -m 0644"  BSD_INSTALL_MAN="install  -o root -g wheel -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python2.7
PYTHON_LIBDIR=lib/python2.7
PYTHON_PLATFORM=freebsd9
PYTHON_SITELIBDIR=lib/python2.7/site-packages
PYTHON_VERSION=python2.7
PYTHON_VER=2.7
OSREL=9.1
PREFIX=%D
LOCALBASE=/usr/local
RESETPREFIX=/usr/local
PORTDOCS=""
PORTEXAMPLES=""
LIB32DIR=lib
DOCSDIR="share/doc/tables"
EXAMPLESDIR="share/examples/tables"
DATADIR="share/tables"
WWWDIR="www/tables"
ETCDIR="etc/tables"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local
LOCALBASE=/usr/local
DATADIR=/usr/local/share/tables
DOCSDIR=/usr/local/share/doc/tables
EXAMPLESDIR=/usr/local/share/examples/tables
WWWDIR=/usr/local/www/tables
ETCDIR=/usr/local/etc/tables
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
WITH_CCACHE_BUILD=yes
CCACHE_DIR=/root/.ccache
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
#### /usr/local/etc/poudriere.d/make.conf ####
WITH_PKGNG=yes
#WITH_PKGNG=devel
#### /usr/local/etc/poudriere.d/ssp-make.conf ####
WITH_SSP_PORTS=yes
DISABLE_MAKE_JOBS=poudriere
---End make.conf---
=======================<phase: check-sanity   >============================
===>  License BSD3CLAUSE accepted by the user
===========================================================================
=======================<phase: pkg-depends    >============================
===>   py27-tables-3.0.0_4 depends on file: /usr/local/sbin/pkg - not found
===>    Verifying install for /usr/local/sbin/pkg in /usr/ports/ports-mgmt/pkg
===>   Installing existing package /packages/All/pkg-1.3.8_2.txz
[pkg.FreeBSD.org] Installing pkg-1.3.8_2... done
Message for pkg-1.3.8_2:
 If you are upgrading from the old package format, first run:

  # pkg2ng
===>   Returning to build of py27-tables-3.0.0_4
===========================================================================
=======================<phase: fetch-depends  >============================
===========================================================================
=======================<phase: fetch          >============================
===>  License BSD3CLAUSE accepted by the user
===> Fetching all distfiles required by py27-tables-3.0.0_4 for building
===========================================================================
=======================<phase: checksum       >============================
===>  License BSD3CLAUSE accepted by the user
===> Fetching all distfiles required by py27-tables-3.0.0_4 for building
=> SHA256 Checksum OK for tables-3.0.0.tar.gz.
=> SHA256 Checksum OK for pytablesmanual-3.0.0.pdf.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract        >============================
===>  License BSD3CLAUSE accepted by the user
===> Fetching all distfiles required by py27-tables-3.0.0_4 for building
===>  Extracting for py27-tables-3.0.0_4
=> SHA256 Checksum OK for tables-3.0.0.tar.gz.
=> SHA256 Checksum OK for pytablesmanual-3.0.0.pdf.
===========================================================================
=======================<phase: patch-depends  >============================
===========================================================================
=======================<phase: patch          >============================
===>  Patching for py27-tables-3.0.0_4
===>  Applying FreeBSD patches for py27-tables-3.0.0_4
===========================================================================
=======================<phase: build-depends  >============================
===>   py27-tables-3.0.0_4 depends on file: /usr/local/lib/python2.7/site-packages/numpy/core/numeric.py - not found
===>    Verifying install for /usr/local/lib/python2.7/site-packages/numpy/core/numeric.py in /usr/ports/math/py-numpy
===>   Installing existing package /packages/All/py27-numpy-1.8.1_4,1.txz
[pkg.FreeBSD.org] Installing indexinfo-0.2... done
[pkg.FreeBSD.org] Installing libiconv-1.14_4... done
[pkg.FreeBSD.org] Installing gettext-0.18.3.1_1... done
[pkg.FreeBSD.org] Installing binutils-2.24_1... done
[pkg.FreeBSD.org] Installing gcc-ecj-4.5... done
[pkg.FreeBSD.org] Installing gmp-5.1.3_2... done
[pkg.FreeBSD.org] Installing mpfr-3.1.2_2... done
[pkg.FreeBSD.org] Installing mpc-1.0.2_1... done
[pkg.FreeBSD.org] Installing gcc-4.8.3_1... done
[pkg.FreeBSD.org] Installing blas-3.4.2_3... done
[pkg.FreeBSD.org] Installing lapack-3.4.2_3... done
[pkg.FreeBSD.org] Installing python27-2.7.8_5... done
[pkg.FreeBSD.org] Installing py27-setuptools27-5.5.1... done
[pkg.FreeBSD.org] Installing py27-nose-1.3.3... done
[pkg.FreeBSD.org] Installing suitesparse-4.0.2_4... done
[pkg.FreeBSD.org] Installing py27-numpy-1.8.1_4,1... done
Message for gcc-4.8.3_1:
 To ensure binaries built with this toolchain find appropriate versions
of the necessary run-time libraries, you may want to link using

  -Wl,-rpath=/usr/local/lib/gcc48

For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens
transparently.
Message for python27-2.7.8_5:
 =====================================================================

Note that some standard Python modules are provided as separate ports
as they require additional dependencies. They are available as:

bsddb           databases/py-bsddb
gdbm            databases/py-gdbm
sqlite3         databases/py-sqlite3
tkinter         x11-toolkits/py-tkinter

=====================================================================
===>   Returning to build of py27-tables-3.0.0_4
===>   py27-tables-3.0.0_4 depends on file: /usr/local/bin/cython - not found
===>    Verifying install for /usr/local/bin/cython in /usr/ports/lang/cython
===>   Installing existing package /packages/All/cython-0.21.txz
[pkg.FreeBSD.org] Installing cython-0.21... done
===>   Returning to build of py27-tables-3.0.0_4
===>   py27-tables-3.0.0_4 depends on package: py27-numexpr>=1.4.1 - not found
===>    Verifying install for py27-numexpr>=1.4.1 in /usr/ports/math/py-numexpr
===>   Installing existing package /packages/All/py27-numexpr-2.2.2_3.txz
[pkg.FreeBSD.org] Installing py27-numexpr-2.2.2_3... done
===>   Returning to build of py27-tables-3.0.0_4
===>   py27-tables-3.0.0_4 depends on package: py27-setuptools27>0 - found
===>   py27-tables-3.0.0_4 depends on file: /usr/local/bin/python2.7 - found
===>   py27-tables-3.0.0_4 depends on file: /usr/local/bin/ccache - not found
===>    Verifying install for /usr/local/bin/ccache in /usr/ports/devel/ccache
===>   Installing existing package /packages/All/ccache-3.1.9_8.txz
[pkg.FreeBSD.org] Installing ccache-3.1.9_8... done
Create compiler links...
create symlink for cc
create symlink for cc (world)
create symlink for c++
create symlink for c++ (world)
create symlink for CC
create symlink for CC (world)
create symlink for gcc
create symlink for gcc (world)
create symlink for g++
create symlink for g++ (world)
create symlink for gcc48
create symlink for gcc48 (world)
create symlink for g++48
create symlink for g++48 (world)
Message for ccache-3.1.9_8:
 NOTE:
Please read /usr/local/share/doc/ccache/ccache-howto-freebsd.txt for 
information on using ccache with FreeBSD ports and src.
===>   Returning to build of py27-tables-3.0.0_4
===========================================================================
=======================<phase: lib-depends    >============================
===>   py27-tables-3.0.0_4 depends on shared library: libhdf5.so - not found
===>    Verifying for libhdf5.so in /usr/ports/science/hdf5
===>   Installing existing package /packages/All/hdf5-1.8.13_1.txz
[pkg.FreeBSD.org] Installing hdf5-1.8.13_1... done
===>   Returning to build of py27-tables-3.0.0_4
===>   py27-tables-3.0.0_4 depends on shared library: liblzo2.so - not found
===>    Verifying for liblzo2.so in /usr/ports/archivers/lzo2
===>   Installing existing package /packages/All/lzo2-2.08.txz
[pkg.FreeBSD.org] Installing lzo2-2.08... done
===>   Returning to build of py27-tables-3.0.0_4
===>   py27-tables-3.0.0_4 depends on shared library: libucl.so - not found
===>    Verifying for libucl.so in /usr/ports/archivers/ucl
===>   Installing existing package /packages/All/ucl-1.03_4.txz
[pkg.FreeBSD.org] Installing ucl-1.03_4... done
===>   Returning to build of py27-tables-3.0.0_4
===========================================================================
=======================<phase: configure      >============================
===>  Configuring for py27-tables-3.0.0_4
* Using Python 2.7.8 (default, Sep 21 2014, 14:35:39) 
* Found numpy 1.8.1 package installed.
* Found numexpr 2.2.2 package installed.
. ERROR:: You need Cython 0.13 or greater to compile PyTables!
*** [do-configure] Error code 1

Stop in /usr/ports/devel/py-tables.