[package - 91amd64-default][biology/emboss] Failed for emboss-6.6.0 in pkg-depends

pkg-fallout at FreeBSD.org pkg-fallout at FreeBSD.org
Thu Sep 25 16:11:18 UTC 2014


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer:     wen at FreeBSD.org
Last committer: olgeni at FreeBSD.org
Ident:          $FreeBSD: head/biology/emboss/Makefile 357139 2014-06-09 11:21:52Z olgeni $
Log URL:        http://beefy2.isc.freebsd.org/data/91amd64-default/2014-09-25_07h19m50s/logs/emboss-6.6.0.log
Build URL:      http://beefy2.isc.freebsd.org/build.html?mastername=91amd64-default&build=2014-09-25_07h19m50s
Log:

====>> Building biology/emboss
build started at Thu Sep 25 16:11:16 UTC 2014
port directory: /usr/ports/biology/emboss
building for: FreeBSD 91amd64-default-job-23 9.1-RELEASE-p17 FreeBSD 9.1-RELEASE-p17 amd64
maintained by: wen at FreeBSD.org
Makefile ident:      $FreeBSD: head/biology/emboss/Makefile 357139 2014-06-09 11:21:52Z olgeni $
Poudriere version: 3.1-pre
Host OSVERSION: 1100027
Jail OSVERSION: 901000

---Begin Environment---
OSVERSION=901000
UNAME_v=FreeBSD 9.1-RELEASE-p17
UNAME_r=9.1-RELEASE-p17
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
SAVED_TERM=
MASTERMNT=/usr/local/poudriere/data/.m/91amd64-default/ref
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/games:/usr/local/sbin:/usr/local/bin:/root/bin
POUDRIERE_BUILD_TYPE=bulk
PKGNAME=emboss-6.6.0
OLDPWD=/root
PWD=/usr/local/poudriere/data/.m/91amd64-default/ref/.p/pool
MASTERNAME=91amd64-default
USER=root
HOME=/root
POUDRIERE_VERSION=3.1-pre
LOCALBASE=/usr/local
PACKAGE_BUILDING=yes
---End Environment---

---Begin OPTIONS List---
===> The following configuration options are available for emboss-6.6.0:
     DOCS=on: Build and/or install documentation
     X11=on: X11 (graphics) support
===> Use 'make config' to modify these settings
---End OPTIONS List---

--CONFIGURE_ARGS--
--with-libiconv-prefix=/usr/local --with-docroot=/usr/local/emboss/share/EMBOSS/doc --x-libraries=/usr/local/lib --x-includes=/usr/local/include --prefix=/usr/local/emboss ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/emboss/work  XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/emboss/work  HOME=/wrkdirs/usr/ports/biology/emboss/work TMPDIR="/tmp" MAKE=gmake SHELL=/bin/sh CONFIG_SHELL=/bin/sh CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/emboss/work  XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/emboss/work  HOME=/wrkdirs/usr/ports/biology/emboss/work TMPDIR="/tmp" MOTIFLIB="-L/usr/local/lib -lXm -lXp" NO_PIE=yes SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local/emboss  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 -pipe -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  LDFLAGS=" -L/usr/local/lib" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fno-strict-aliasing"  MANPREFIX="/usr/local/emboss" BSD_INSTALL_PROGRAM="install  -s -o root -g wheel -m 555"  BSD_INSTALL_LIB="install  -s -o root -g wheel -m 444"  BSD_INSTALL_SCRIPT="install  -o root -g wheel -m 555"  BSD_INSTALL_DATA="install  -o root -g wheel -m 0644"  BSD_INSTALL_MAN="install  -o root -g wheel -m 444"
--End MAKE_ENV--

--PLIST_SUB--
OSREL=9.1
PREFIX=%D
LOCALBASE=/usr/local
RESETPREFIX=/usr/local/emboss
PORTDOCS=""
PORTEXAMPLES=""
LIB32DIR=lib
DOCSDIR="share/EMBOSS/doc"
EXAMPLESDIR="share/examples/emboss"
DATADIR="share/EMBOSS"
WWWDIR="www/emboss"
ETCDIR="etc/emboss"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local/emboss
DATADIR=/usr/local/emboss/share/EMBOSS
PREFIX=/usr/local/emboss
LOCALBASE=/usr/local
DATADIR=/usr/local/emboss/share/EMBOSS
DOCSDIR=/usr/local/emboss/share/EMBOSS/doc
EXAMPLESDIR=/usr/local/emboss/share/examples/emboss
WWWDIR=/usr/local/emboss/www/emboss
ETCDIR=/usr/local/emboss/etc/emboss
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
#### /usr/local/etc/poudriere.d/make.conf ####
WITH_PKGNG=yes
#WITH_PKGNG=devel
# clean-restricted ran via poudriere.conf NO_RESTRICTED
#NO_RESTRICTED=yes
DISABLE_MAKE_JOBS=poudriere
---End make.conf---
=======================<phase: check-sanity   >============================
===>  License GPLv2 accepted by the user
===========================================================================
=======================<phase: pkg-depends    >============================
===>   emboss-6.6.0 depends on file: /usr/local/sbin/pkg - not found
===>    Verifying install for /usr/local/sbin/pkg in /usr/ports/ports-mgmt/pkg
===>   emboss-6.6.0 depends on package: /packages/All/pkg-1.3.8_1.txz - not found
===>   USE_PACKAGE_DEPENDS_ONLY set - not building missing dependency from source
*** [pkg-depends] Error code 1

Stop in /usr/ports/biology/emboss.


More information about the freebsd-pkg-fallout mailing list