[REL - head-amd64-default][science/py-h5py] Failed for py27-h5py-2.3.0 in configure

Fri Jul 11 21:55:23 UTC 2014

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer:     xmj at chaot.net
Last committer: xmj at FreeBSD.org
Ident:          $FreeBSD: head/science/py-h5py/Makefile 357104 2014-06-09 05:07:54Z xmj $
Log URL:        http://beefy2.isc.freebsd.org/bulk/head-amd64-default/2014-07-11_10h42m33s/logs/py27-h5py-2.3.0.log
Build URL:      http://beefy2.isc.freebsd.org/bulk/head-amd64-default/2014-07-11_10h42m33s
Log:

====>> Building science/py-h5py
build started at Fri Jul 11 21:54:58 UTC 2014
port directory: /usr/ports/science/py-h5py
building for: FreeBSD head-amd64-default-job-22 11.0-CURRENT FreeBSD 11.0-CURRENT r268445 amd64
maintained by: xmj at chaot.net
Makefile ident:      $FreeBSD: head/science/py-h5py/Makefile 357104 2014-06-09 05:07:54Z xmj $
Poudriere version: 3.1-pre
Host OSVERSION: 1100022
Jail OSVERSION: 1100027

!!! Jail is newer than host. (Jail: 1100027, Host: 1100022) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!

---Begin Environment---
OSVERSION=1100027
UNAME_v=FreeBSD 11.0-CURRENT r268445
UNAME_r=11.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
SAVED_TERM=
MASTERMNT=/usr/local/poudriere/data/build/head-amd64-default/ref
PKG_EXT=txz
tpid=17184
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/games:/usr/local/sbin:/usr/local/bin:/root/bin
POUDRIERE_BUILD_TYPE=bulk
PKGNG=1
PKGNAME=py27-h5py-2.3.0
PKG_DELETE=/usr/local/sbin/pkg-static delete -y -f
PKG_ADD=/usr/local/sbin/pkg-static add
OLDPWD=/usr/local/poudriere/data/build/head-amd64-default/ref/poudriere/rdeps
PWD=/usr/local/poudriere/data/build/head-amd64-default/ref/poudriere/pool
MASTERNAME=head-amd64-default
USER=root
HOME=/root
POUDRIERE_VERSION=3.1-pre
LOCALBASE=/usr/local
PACKAGE_BUILDING=yes
PKG_VERSION=/poudriere/pkg-static version
PKG_BIN=/usr/local/sbin/pkg-static
---End Environment---

---Begin OPTIONS List---
===> The following configuration options are available for py27-h5py-2.3.0:
     DOCS=on: Build and/or install documentation
     EXAMPLES=on: Build and/or install examples
===> Use 'make config' to modify these settings
---End OPTIONS List---

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/science/py-h5py/work  XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/py-h5py/work  HOME=/wrkdirs/usr/ports/science/py-h5py/work TMPDIR="/tmp" PYTHON="/usr/local/bin/python2.7" SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/science/py-h5py/work  XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/py-h5py/work  HOME=/wrkdirs/usr/ports/science/py-h5py/work TMPDIR="/tmp" NO_PIE=yes SHELL=/bin/sh NO_LINT=YES LDSHARED="cc -shared" PYTHONDONTWRITEBYTECODE= PYTHONOPTIMIZE= PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 -pipe  -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  LDFLAGS="" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -o root -g wheel -m 555"  BSD_INSTALL_LIB="install  -s -o root -g wheel -m 444"  BSD_INSTALL_SCRIPT="install  -o root -g wheel -m 555"  BSD_INSTALL_DATA="install  -o root -g wheel -m 444"  BSD_INSTALL_MAN="install  -o root -g wheel -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python2.7
PYTHON_LIBDIR=lib/python2.7
PYTHON_PLATFORM=freebsd11
PYTHON_SITELIBDIR=lib/python2.7/site-packages
PYTHON_VERSION=python2.7
OSREL=11.0
PREFIX=%D
LOCALBASE=/usr/local
PORTDOCS=""
PORTEXAMPLES=""
PORTDATA=""
LIB32DIR=lib
DOCSDIR="share/doc/h5py"
EXAMPLESDIR="share/examples/h5py"
DATADIR="share/h5py"
WWWDIR="www/h5py"
ETCDIR="etc/h5py"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local
LOCALBASE=/usr/local
DATADIR=/usr/local/share/h5py
DOCSDIR=/usr/local/share/doc/h5py
EXAMPLESDIR=/usr/local/share/examples/h5py
WWWDIR=/usr/local/www/h5py
ETCDIR=/usr/local/etc/h5py
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
#### /usr/local/etc/poudriere.d/make.conf ####
WITH_PKGNG=yes
# clean-restricted ran via poudriere.conf NO_RESTRICTED
#NO_RESTRICTED=yes
DISABLE_MAKE_JOBS=poudriere
---End make.conf---
===>  Cleaning for py27-h5py-2.3.0
=======================<phase: check-sanity   >============================
===>  License BSD accepted by the user
===========================================================================
=======================<phase: pkg-depends    >============================
===>   py27-h5py-2.3.0 depends on file: /usr/local/sbin/pkg - not found
===>    Verifying install for /usr/local/sbin/pkg in /usr/ports/ports-mgmt/pkg
===>   Installing existing package /packages/All/pkg-1.2.7_4.txz
Installing pkg-1.2.7_4... done
If you are upgrading from the old package format, first run:

  # pkg2ng
===>   Returning to build of py27-h5py-2.3.0
===========================================================================
=======================<phase: fetch-depends  >============================
===========================================================================
=======================<phase: fetch          >============================
===>  License BSD accepted by the user
===> Fetching all distfiles required by py27-h5py-2.3.0 for building
===========================================================================
=======================<phase: checksum       >============================
===>  License BSD accepted by the user
===> Fetching all distfiles required by py27-h5py-2.3.0 for building
=> SHA256 Checksum OK for h5py-2.3.0.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract        >============================
===>  License BSD accepted by the user
===> Fetching all distfiles required by py27-h5py-2.3.0 for building
===>  Extracting for py27-h5py-2.3.0
=> SHA256 Checksum OK for h5py-2.3.0.tar.gz.
===========================================================================
=======================<phase: patch-depends  >============================
===========================================================================
=======================<phase: patch          >============================
===>  Patching for py27-h5py-2.3.0
===========================================================================
=======================<phase: build-depends  >============================
===>   py27-h5py-2.3.0 depends on file: /usr/local/lib/python2.7/site-packages/numpy/core/numeric.py - not found
===>    Verifying install for /usr/local/lib/python2.7/site-packages/numpy/core/numeric.py in /usr/ports/math/py-numpy
===>   Installing existing package /packages/All/py27-numpy-1.8.1,1.txz
Installing py27-numpy-1.8.1,1...Installing blas-3.4.2_2...Installing gcc-4.7.3_1...Installing binutils-2.24...Installing gettext-0.18.3.1_1...Installing indexinfo-0.2... done
 done
 done
Installing gcc-ecj-4.5... done
Installing gmp-5.1.3_2... done
Installing mpc-1.0.2...Installing mpfr-3.1.2_2... done
 done
 done
 done
Installing lapack-3.4.2_2... done
Installing py27-nose-1.3.0_1...Installing py27-setuptools27-5.1...Installing python27-2.7.6_4... done
 done
 done
Installing suitesparse-4.0.2_3... done
 done
To ensure binaries built with this toolchain find appropriate versions
of the necessary run-time libraries, you may want to link using

  -Wl,-rpath=/usr/local/lib/gcc47

For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens
transparently.
====
Note that some of the standard modules are provided as separate
ports since they require extra dependencies:

bsddb           databases/py-bsddb
gdbm            databases/py-gdbm
sqlite3         databases/py-sqlite3
tkinter         x11-toolkits/py-tkinter

Install them as needed.
====
===>   Returning to build of py27-h5py-2.3.0
===>   py27-h5py-2.3.0 depends on executable: cython - not found
===>    Verifying install for cython in /usr/ports/lang/cython
===>   Installing existing package /packages/All/cython-0.20.1.txz
Installing cython-0.20.1... done
===>   Returning to build of py27-h5py-2.3.0
===>   py27-h5py-2.3.0 depends on package: py27-setuptools27>0 - found
===>   py27-h5py-2.3.0 depends on file: /usr/local/bin/python2.7 - found
===========================================================================
=======================<phase: lib-depends    >============================
===>   py27-h5py-2.3.0 depends on shared library: libhdf5.so - not found
===>    Verifying for libhdf5.so in /usr/ports/science/hdf5
===>   Installing existing package /packages/All/hdf5-1.8.13_1.txz
Installing hdf5-1.8.13_1... done
===>   Returning to build of py27-h5py-2.3.0
===========================================================================
=======================<phase: configure      >============================
===>  Configuring for py27-h5py-2.3.0
Autodetected HDF5 version 1.8.13
Download error on https://pypi.python.org/simple/numpy/: [Errno 49] Can't assign requested address -- Some packages may not be found!
Couldn't find index page for 'numpy' (maybe misspelled?)
Download error on https://pypi.python.org/simple/: [Errno 49] Can't assign requested address -- Some packages may not be found!
No local packages or download links found for numpy>=1.0.1
Traceback (most recent call last):
  File "<string>", line 1, in <module>
  File "setup.py", line 317, in <module>
    cmdclass = {'build_ext': build_ext, 'test': test, 'build_py':build_py}
  File "/usr/local/lib/python2.7/distutils/core.py", line 112, in setup
    _setup_distribution = dist = klass(attrs)
  File "/usr/local/lib/python2.7/site-packages/setuptools/dist.py", line 261, in __init__
    self.fetch_build_eggs(attrs.pop('setup_requires'))
  File "/usr/local/lib/python2.7/site-packages/setuptools/dist.py", line 286, in fetch_build_eggs
    replace_conflicting=True
  File "/usr/local/lib/python2.7/site-packages/pkg_resources.py", line 631, in resolve
    dist = best[req.key] = env.best_match(req, ws, installer)
  File "/usr/local/lib/python2.7/site-packages/pkg_resources.py", line 871, in best_match
    return self.obtain(req, installer)
  File "/usr/local/lib/python2.7/site-packages/pkg_resources.py", line 883, in obtain
    return installer(requirement)
  File "/usr/local/lib/python2.7/site-packages/setuptools/dist.py", line 336, in fetch_build_egg
    return cmd.easy_install(req)
  File "/usr/local/lib/python2.7/site-packages/setuptools/command/easy_install.py", line 589, in easy_install
    raise DistutilsError(msg)
distutils.errors.DistutilsError: Could not find suitable distribution for Requirement.parse('numpy>=1.0.1')
*** Error code 1

Stop.
make: stopped in /usr/ports/science/py-h5py
===>  Cleaning for py27-h5py-2.3.0