[REL - head-i386-default][biology/avida] Failed for avida-2.12.4 in build
pkg-fallout at FreeBSD.org
pkg-fallout at FreeBSD.org
Fri Oct 25 05:09:01 UTC 2013
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.
Maintainer: ports at FreeBSD.org
Last committer: bapt at FreeBSD.org
Ident: $FreeBSD: head/biology/avida/Makefile 327709 2013-09-20 15:55:44Z bapt $
Log URL: http://beefy1.isc.freebsd.org/bulk/head-i386-default/2013-10-24_12h59m17s/logs/avida-2.12.4.log
Build URL: http://beefy1.isc.freebsd.org/bulk/head-i386-default/2013-10-24_12h59m17s
Log:
====>> Building biology/avida
build started at Fri Oct 25 05:08:45 UTC 2013
port directory: /usr/ports/biology/avida
building for: FreeBSD head-i386-default-job-02 11.0-CURRENT FreeBSD 11.0-CURRENT r256430 i386
maintained by: ports at FreeBSD.org
Makefile ident: $FreeBSD: head/biology/avida/Makefile 327709 2013-09-20 15:55:44Z bapt $
Poudriere version: 3.1-pre
---Begin Environment---
UNAME_m=i386
UNAME_p=i386
OSVERSION=1100000
UNAME_v=FreeBSD 11.0-CURRENT r256430
UNAME_r=11.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/games:/usr/local/sbin:/usr/local/bin:/root/bin
STATUS=1
MASTERMNT=/usr/local/poudriere/data/build/head-i386-default/ref
PKG_EXT=txz
tpid=29018
POUDRIERE_BUILD_TYPE=bulk
PKGNG=1
PKGNAME=avida-2.12.4
PKG_DELETE=/usr/local/sbin/pkg-static delete -y -f
PKG_ADD=/usr/local/sbin/pkg-static add
PWD=/root
MASTERNAME=head-i386-default
USER=root
HOME=/root
POUDRIERE_VERSION=3.1-pre
LOCALBASE=/usr/local
PACKAGE_BUILDING=yes
PKG_VERSION=/poudriere/pkg-static version
PKG_BIN=/usr/local/sbin/pkg-static
---End Environment---
---Begin OPTIONS List---
===> The following configuration options are available for avida-2.12.4:
DOCS=on: Build and/or install documentation
===> Use 'make config' to modify these settings
---End OPTIONS List---
--CONFIGURE_ARGS--
--End CONFIGURE_ARGS--
--CONFIGURE_ENV--
TMPDIR="/tmp" TMPDIR="/tmp" SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--
--MAKE_ENV--
TMPDIR="/tmp" TMPDIR="/tmp" SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local LOCALBASE=/usr/local LIBDIR="/usr/lib" CC="cc" CFLAGS="-O2 -pipe -fno-strict-aliasing" CPP="cpp" CPPFLAGS="" LDFLAGS=" -Wl,-rpath=/usr/lib:/usr/local/lib" CXX="c++" CXXFLAGS="-O2 -pipe -fno-strict-aliasing" MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -o root -g wheel -m 555" BSD_INSTALL_LIB="install -s -o root -g wheel -m 444" BSD_INSTALL_SCRIPT="install -o root -g wheel -m 555" BSD_INSTALL_DATA="install -o root -g wheel -m 444" BSD_INSTALL_MAN="install -o root -g wheel -m 444"
--End MAKE_ENV--
--SUB_LIST--
PREFIX=/usr/local
LOCALBASE=/usr/local
DATADIR=/usr/local/share/avida
DOCSDIR=/usr/local/share/doc/avida
EXAMPLESDIR=/usr/local/share/examples/avida
WWWDIR=/usr/local/www/avida
ETCDIR=/usr/local/etc/avida
--End SUB_LIST--
---Begin make.conf---
ARCH=i386
MACHINE=i386
MACHINE_ARCH=i386
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
#### /usr/local/etc/poudriere.d/make.conf ####
WITH_PKGNG=yes
NO_RESTRICTED=yes
DISABLE_MAKE_JOBS=poudriere
---End make.conf---
===> Cleaning for avida-2.12.4
=======================<phase: check-config >============================
===========================================================================
=======================<phase: pkg-depends >============================
===> avida-2.12.4 depends on file: /usr/local/sbin/pkg - not found
===> Verifying install for /usr/local/sbin/pkg in /usr/ports/ports-mgmt/pkg
===> Installing existing package /packages/All/pkg-1.1.4_8.txz
Installing pkg-1.1.4_8... done
If you are upgrading from the old package format, first run:
# pkg2ng
===> Returning to build of avida-2.12.4
===========================================================================
=======================<phase: fetch-depends >============================
===========================================================================
=======================<phase: fetch >============================
===> License GPLv3 accepted by the user
===> Fetching all distfiles required by avida-2.12.4 for building
===========================================================================
=======================<phase: checksum >============================
===> License GPLv3 accepted by the user
===> Fetching all distfiles required by avida-2.12.4 for building
=> SHA256 Checksum OK for avida-2.12.4-src.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract >============================
===> License GPLv3 accepted by the user
===> Fetching all distfiles required by avida-2.12.4 for building
===> Extracting for avida-2.12.4
=> SHA256 Checksum OK for avida-2.12.4-src.tar.gz.
===========================================================================
=======================<phase: patch-depends >============================
===========================================================================
=======================<phase: patch >============================
===> Patching for avida-2.12.4
===> Applying FreeBSD patches for avida-2.12.4
===========================================================================
=======================<phase: build-depends >============================
===> avida-2.12.4 depends on file: /usr/local/bin/cmake - not found
===> Verifying install for /usr/local/bin/cmake in /usr/ports/devel/cmake
===> Installing existing package /packages/All/cmake-2.8.11.2.txz
Installing cmake-2.8.11.2...Installing cmake-modules-2.8.11.2_1... done
done
===> Returning to build of avida-2.12.4
===========================================================================
=======================<phase: lib-depends >============================
===========================================================================
=======================<phase: configure >============================
===> Configuring for avida-2.12.4
===> Performing out-of-source build
/bin/mkdir -p /wrkdirs/usr/ports/biology/avida/work/.build
-- The C compiler identification is Clang 3.3.0
-- The CXX compiler identification is Clang 3.3.0
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Performing Test HAVE_FUSED_MADD
-- Performing Test HAVE_FUSED_MADD - Success
-- Configuring done
-- Generating done
CMake Warning:
Manually-specified variables were not used by the project:
CMAKE_CXX_FLAGS_DEBUG
CMAKE_C_FLAGS_DEBUG
CMAKE_C_FLAGS_RELEASE
CMAKE_MODULE_LINKER_FLAGS
THREADS_HAVE_PTHREAD_ARG
-- Build files have been written to: /wrkdirs/usr/ports/biology/avida/work/.build
===========================================================================
=======================<phase: build >============================
===> Building for avida-2.12.4
/usr/local/bin/cmake -H/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src -B/wrkdirs/usr/ports/biology/avida/work/.build --check-build-system CMakeFiles/Makefile.cmake 0
/usr/local/bin/cmake -E cmake_progress_start /wrkdirs/usr/ports/biology/avida/work/.build/CMakeFiles /wrkdirs/usr/ports/biology/avida/work/.build/CMakeFiles/progress.marks
/usr/bin/make -f CMakeFiles/Makefile2 all
/usr/bin/make -f libs/apto/src/CMakeFiles/aptoshared.dir/build.make libs/apto/src/CMakeFiles/aptoshared.dir/depend
cd /wrkdirs/usr/ports/biology/avida/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src /wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src /wrkdirs/usr/ports/biology/avida/work/.build /wrkdirs/usr/ports/biology/avida/work/.build/libs/apto/src /wrkdirs/usr/ports/biology/avida/work/.build/libs/apto/src/CMakeFiles/aptoshared.dir/DependInfo.cmake
Scanning dependencies of target aptoshared
/usr/bin/make -f libs/apto/src/CMakeFiles/aptoshared.dir/build.make libs/apto/src/CMakeFiles/aptoshared.dir/build
/usr/local/bin/cmake -E cmake_progress_report /wrkdirs/usr/ports/biology/avida/work/.build/CMakeFiles
[ 0%] Building CXX object libs/apto/src/CMakeFiles/aptoshared.dir/core/FileSystem.cc.o
cd /wrkdirs/usr/ports/biology/avida/work/.build/libs/apto/src && /usr/bin/c++ -Daptoshared_EXPORTS -O2 -pipe -fno-strict-aliasing -mno-fused-madd -funroll-loops -fstrict-aliasing -ftree-vectorize -fvisibility-inlines-hidden -Wextra -Wno-unknown-pragmas -Wno-trigraphs -DNDEBUG -fPIC -I/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src/../include -o CMakeFiles/aptoshared.dir/core/FileSystem.cc.o -c /wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src/core/FileSystem.cc
c++: warning: argument unused during compilation: '-mno-fused-madd'
/usr/local/bin/cmake -E cmake_progress_report /wrkdirs/usr/ports/biology/avida/work/.build/CMakeFiles 11
[ 1%] Building CXX object libs/apto/src/CMakeFiles/aptoshared.dir/core/RefCount.cc.o
cd /wrkdirs/usr/ports/biology/avida/work/.build/libs/apto/src && /usr/bin/c++ -Daptoshared_EXPORTS -O2 -pipe -fno-strict-aliasing -mno-fused-madd -funroll-loops -fstrict-aliasing -ftree-vectorize -fvisibility-inlines-hidden -Wextra -Wno-unknown-pragmas -Wno-trigraphs -DNDEBUG -fPIC -I/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src/../include -o CMakeFiles/aptoshared.dir/core/RefCount.cc.o -c /wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src/core/RefCount.cc
c++: warning: argument unused during compilation: '-mno-fused-madd'
/usr/local/bin/cmake -E cmake_progress_report /wrkdirs/usr/ports/biology/avida/work/.build/CMakeFiles
[ 1%] Building CXX object libs/apto/src/CMakeFiles/aptoshared.dir/core/Thread.cc.o
cd /wrkdirs/usr/ports/biology/avida/work/.build/libs/apto/src && /usr/bin/c++ -Daptoshared_EXPORTS -O2 -pipe -fno-strict-aliasing -mno-fused-madd -funroll-loops -fstrict-aliasing -ftree-vectorize -fvisibility-inlines-hidden -Wextra -Wno-unknown-pragmas -Wno-trigraphs -DNDEBUG -fPIC -I/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src/../include -o CMakeFiles/aptoshared.dir/core/Thread.cc.o -c /wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src/core/Thread.cc
c++: warning: argument unused during compilation: '-mno-fused-madd'
/usr/local/bin/cmake -E cmake_progress_report /wrkdirs/usr/ports/biology/avida/work/.build/CMakeFiles 12
[ 2%] Building CXX object libs/apto/src/CMakeFiles/aptoshared.dir/platform/Platform.cc.o
cd /wrkdirs/usr/ports/biology/avida/work/.build/libs/apto/src && /usr/bin/c++ -Daptoshared_EXPORTS -O2 -pipe -fno-strict-aliasing -mno-fused-madd -funroll-loops -fstrict-aliasing -ftree-vectorize -fvisibility-inlines-hidden -Wextra -Wno-unknown-pragmas -Wno-trigraphs -DNDEBUG -fPIC -I/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src/../include -o CMakeFiles/aptoshared.dir/platform/Platform.cc.o -c /wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src/platform/Platform.cc
c++: warning: argument unused during compilation: '-mno-fused-madd'
/usr/local/bin/cmake -E cmake_progress_report /wrkdirs/usr/ports/biology/avida/work/.build/CMakeFiles
[ 2%] Building CXX object libs/apto/src/CMakeFiles/aptoshared.dir/stat/ContingencyTable.cc.o
cd /wrkdirs/usr/ports/biology/avida/work/.build/libs/apto/src && /usr/bin/c++ -Daptoshared_EXPORTS -O2 -pipe -fno-strict-aliasing -mno-fused-madd -funroll-loops -fstrict-aliasing -ftree-vectorize -fvisibility-inlines-hidden -Wextra -Wno-unknown-pragmas -Wno-trigraphs -DNDEBUG -fPIC -I/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src/../include -o CMakeFiles/aptoshared.dir/stat/ContingencyTable.cc.o -c /wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src/stat/ContingencyTable.cc
c++: warning: argument unused during compilation: '-mno-fused-madd'
/usr/local/bin/cmake -E cmake_progress_report /wrkdirs/usr/ports/biology/avida/work/.build/CMakeFiles 13
[ 3%] Building CXX object libs/apto/src/CMakeFiles/aptoshared.dir/stat/FishersExact.cc.o
cd /wrkdirs/usr/ports/biology/avida/work/.build/libs/apto/src && /usr/bin/c++ -Daptoshared_EXPORTS -O2 -pipe -fno-strict-aliasing -mno-fused-madd -funroll-loops -fstrict-aliasing -ftree-vectorize -fvisibility-inlines-hidden -Wextra -Wno-unknown-pragmas -Wno-trigraphs -DNDEBUG -fPIC -I/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src/../include -o CMakeFiles/aptoshared.dir/stat/FishersExact.cc.o -c /wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src/stat/FishersExact.cc
c++: warning: argument unused during compilation: '-mno-fused-madd'
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src/stat/FishersExact.cc:1052:21: warning: unsequenced modification and access to 'idx_inc' [-Wunsequenced]
while (row_diff[++idx_inc] == row_marginals[idx_inc]) ;
^ ~~~~~~~
1 warning generated.
Linking CXX shared library ../../../lib/libapto.so
cd /wrkdirs/usr/ports/biology/avida/work/.build/libs/apto/src && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/aptoshared.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -O2 -pipe -fno-strict-aliasing -mno-fused-madd -funroll-loops -fstrict-aliasing -ftree-vectorize -fvisibility-inlines-hidden -Wextra -Wno-unknown-pragmas -Wno-trigraphs -DNDEBUG -Wl,-rpath=/usr/lib:/usr/local/lib -shared -Wl,-soname,libapto.so -o ../../../lib/libapto.so CMakeFiles/aptoshared.dir/core/FileSystem.cc.o CMakeFiles/aptoshared.dir/core/RefCount.cc.o CMakeFiles/aptoshared.dir/core/Thread.cc.o CMakeFiles/aptoshared.dir/platform/Platform.cc.o CMakeFiles/aptoshared.dir/stat/ContingencyTable.cc.o CMakeFiles/aptoshared.dir/stat/FishersExact.cc.o -pthread -pthread
/usr/local/bin/cmake -E cmake_progress_report /wrkdirs/usr/ports/biology/avida/work/.build/CMakeFiles 11 12 13
[ 3%] Built target aptoshared
/usr/bin/make -f libs/apto/src/CMakeFiles/aptostatic.dir/build.make libs/apto/src/CMakeFiles/aptostatic.dir/depend
cd /wrkdirs/usr/ports/biology/avida/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src /wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src /wrkdirs/usr/ports/biology/avida/work/.build /wrkdirs/usr/ports/biology/avida/work/.build/libs/apto/src /wrkdirs/usr/ports/biology/avida/work/.build/libs/apto/src/CMakeFiles/aptostatic.dir/DependInfo.cmake
Scanning dependencies of target aptostatic
/usr/bin/make -f libs/apto/src/CMakeFiles/aptostatic.dir/build.make libs/apto/src/CMakeFiles/aptostatic.dir/build
/usr/local/bin/cmake -E cmake_progress_report /wrkdirs/usr/ports/biology/avida/work/.build/CMakeFiles
[ 3%] Building CXX object libs/apto/src/CMakeFiles/aptostatic.dir/core/FileSystem.cc.o
cd /wrkdirs/usr/ports/biology/avida/work/.build/libs/apto/src && /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -mno-fused-madd -funroll-loops -fstrict-aliasing -ftree-vectorize -fvisibility-inlines-hidden -Wextra -Wno-unknown-pragmas -Wno-trigraphs -DNDEBUG -I/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src/../include -o CMakeFiles/aptostatic.dir/core/FileSystem.cc.o -c /wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src/core/FileSystem.cc
c++: warning: argument unused during compilation: '-mno-fused-madd'
/usr/local/bin/cmake -E cmake_progress_report /wrkdirs/usr/ports/biology/avida/work/.build/CMakeFiles 14
[ 4%] Building CXX object libs/apto/src/CMakeFiles/aptostatic.dir/core/RefCount.cc.o
cd /wrkdirs/usr/ports/biology/avida/work/.build/libs/apto/src && /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -mno-fused-madd -funroll-loops -fstrict-aliasing -ftree-vectorize -fvisibility-inlines-hidden -Wextra -Wno-unknown-pragmas -Wno-trigraphs -DNDEBUG -I/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src/../include -o CMakeFiles/aptostatic.dir/core/RefCount.cc.o -c /wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src/core/RefCount.cc
c++: warning: argument unused during compilation: '-mno-fused-madd'
/usr/local/bin/cmake -E cmake_progress_report /wrkdirs/usr/ports/biology/avida/work/.build/CMakeFiles
[ 4%] Building CXX object libs/apto/src/CMakeFiles/aptostatic.dir/core/Thread.cc.o
cd /wrkdirs/usr/ports/biology/avida/work/.build/libs/apto/src && /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -mno-fused-madd -funroll-loops -fstrict-aliasing -ftree-vectorize -fvisibility-inlines-hidden -Wextra -Wno-unknown-pragmas -Wno-trigraphs -DNDEBUG -I/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src/../include -o CMakeFiles/aptostatic.dir/core/Thread.cc.o -c /wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src/core/Thread.cc
c++: warning: argument unused during compilation: '-mno-fused-madd'
/usr/local/bin/cmake -E cmake_progress_report /wrkdirs/usr/ports/biology/avida/work/.build/CMakeFiles 15
[ 5%] Building CXX object libs/apto/src/CMakeFiles/aptostatic.dir/platform/Platform.cc.o
cd /wrkdirs/usr/ports/biology/avida/work/.build/libs/apto/src && /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -mno-fused-madd -funroll-loops -fstrict-aliasing -ftree-vectorize -fvisibility-inlines-hidden -Wextra -Wno-unknown-pragmas -Wno-trigraphs -DNDEBUG -I/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src/../include -o CMakeFiles/aptostatic.dir/platform/Platform.cc.o -c /wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src/platform/Platform.cc
c++: warning: argument unused during compilation: '-mno-fused-madd'
/usr/local/bin/cmake -E cmake_progress_report /wrkdirs/usr/ports/biology/avida/work/.build/CMakeFiles
[ 5%] Building CXX object libs/apto/src/CMakeFiles/aptostatic.dir/stat/ContingencyTable.cc.o
cd /wrkdirs/usr/ports/biology/avida/work/.build/libs/apto/src && /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -mno-fused-madd -funroll-loops -fstrict-aliasing -ftree-vectorize -fvisibility-inlines-hidden -Wextra -Wno-unknown-pragmas -Wno-trigraphs -DNDEBUG -I/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src/../include -o CMakeFiles/aptostatic.dir/stat/ContingencyTable.cc.o -c /wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src/stat/ContingencyTable.cc
c++: warning: argument unused during compilation: '-mno-fused-madd'
/usr/local/bin/cmake -E cmake_progress_report /wrkdirs/usr/ports/biology/avida/work/.build/CMakeFiles 16
[ 6%] Building CXX object libs/apto/src/CMakeFiles/aptostatic.dir/stat/FishersExact.cc.o
cd /wrkdirs/usr/ports/biology/avida/work/.build/libs/apto/src && /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -mno-fused-madd -funroll-loops -fstrict-aliasing -ftree-vectorize -fvisibility-inlines-hidden -Wextra -Wno-unknown-pragmas -Wno-trigraphs -DNDEBUG -I/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src/../include -o CMakeFiles/aptostatic.dir/stat/FishersExact.cc.o -c /wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src/stat/FishersExact.cc
c++: warning: argument unused during compilation: '-mno-fused-madd'
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src/stat/FishersExact.cc:1052:21: warning: unsequenced modification and access to 'idx_inc' [-Wunsequenced]
while (row_diff[++idx_inc] == row_marginals[idx_inc]) ;
^ ~~~~~~~
1 warning generated.
Linking CXX static library ../../../lib/libapto.a
cd /wrkdirs/usr/ports/biology/avida/work/.build/libs/apto/src && /usr/local/bin/cmake -P CMakeFiles/aptostatic.dir/cmake_clean_target.cmake
cd /wrkdirs/usr/ports/biology/avida/work/.build/libs/apto/src && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/aptostatic.dir/link.txt --verbose=1
/usr/bin/ar cr ../../../lib/libapto.a CMakeFiles/aptostatic.dir/core/FileSystem.cc.o CMakeFiles/aptostatic.dir/core/RefCount.cc.o CMakeFiles/aptostatic.dir/core/Thread.cc.o CMakeFiles/aptostatic.dir/platform/Platform.cc.o CMakeFiles/aptostatic.dir/stat/ContingencyTable.cc.o CMakeFiles/aptostatic.dir/stat/FishersExact.cc.o
/usr/bin/ranlib ../../../lib/libapto.a
/usr/local/bin/cmake -E cmake_progress_report /wrkdirs/usr/ports/biology/avida/work/.build/CMakeFiles 14 15 16
[ 6%] Built target aptostatic
/usr/bin/make -f libs/apto/utils/unittest/googletest/CMakeFiles/gtest.dir/build.make libs/apto/utils/unittest/googletest/CMakeFiles/gtest.dir/depend
cd /wrkdirs/usr/ports/biology/avida/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src /wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest /wrkdirs/usr/ports/biology/avida/work/.build /wrkdirs/usr/ports/biology/avida/work/.build/libs/apto/utils/unittest/googletest /wrkdirs/usr/ports/biology/avida/work/.build/libs/apto/utils/unittest/googletest/CMakeFiles/gtest.dir/DependInfo.cmake
Scanning dependencies of target gtest
/usr/bin/make -f libs/apto/utils/unittest/googletest/CMakeFiles/gtest.dir/build.make libs/apto/utils/unittest/googletest/CMakeFiles/gtest.dir/build
/usr/local/bin/cmake -E cmake_progress_report /wrkdirs/usr/ports/biology/avida/work/.build/CMakeFiles 91
[ 7%] Building CXX object libs/apto/utils/unittest/googletest/CMakeFiles/gtest.dir/gtest-death-test.cc.o
cd /wrkdirs/usr/ports/biology/avida/work/.build/libs/apto/utils/unittest/googletest && /usr/bin/c++ -O2 -pipe -fno-strict-aliasing -mno-fused-madd -funroll-loops -fstrict-aliasing -ftree-vectorize -fvisibility-inlines-hidden -Wextra -Wno-unknown-pragmas -Wno-trigraphs -DNDEBUG -I/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/include -o CMakeFiles/gtest.dir/gtest-death-test.cc.o -c /wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/gtest-death-test.cc
c++: warning: argument unused during compilation: '-mno-fused-madd'
In file included from /wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/gtest-death-test.cc:66:
In file included from /wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/include/gtest/internal/gtest-internal-inl.h:65:
In file included from /wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/include/gtest/gtest.h:61:
In file included from /wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/include/gtest/gtest-param-test.h:163:
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/include/gtest/internal/gtest-param-util-generated.h:2837:46: error: no member named 'tr1' in namespace 'std'
: public ParamGeneratorInterface< ::std::tr1::tuple<T1, T2> > {
~~~~~~~^
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/include/gtest/internal/gtest-param-util-generated.h:2837:57: error: 'T1' does not refer to a value
: public ParamGeneratorInterface< ::std::tr1::tuple<T1, T2> > {
^
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/include/gtest/internal/gtest-param-util-generated.h:2835:20: note: declared here
template <typename T1, typename T2>
^
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/include/gtest/internal/gtest-param-util-generated.h:2837:65: error: expected class name
: public ParamGeneratorInterface< ::std::tr1::tuple<T1, T2> > {
^
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/include/gtest/internal/gtest-param-util-generated.h:2839:18: error: no member named 'tr1' in namespace 'std'
typedef ::std::tr1::tuple<T1, T2> ParamType;
~~~~~~~^
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/include/gtest/internal/gtest-param-util-generated.h:2839:28: error: expected member name or ';' after declaration specifiers
typedef ::std::tr1::tuple<T1, T2> ParamType;
~~~~~~~~~~~~~~~~~~~~~~~~~^
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/include/gtest/internal/gtest-param-util-generated.h:2846:34: error: use of undeclared identifier 'ParamType'
virtual ParamIteratorInterface<ParamType>* Begin() const {
^
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/include/gtest/internal/gtest-param-util-generated.h:2849:34: error: use of undeclared identifier 'ParamType'
virtual ParamIteratorInterface<ParamType>* End() const {
^
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/include/gtest/internal/gtest-param-util-generated.h:2854:50: error: use of undeclared identifier 'ParamType'
class Iterator : public ParamIteratorInterface<ParamType> {
^
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/include/gtest/internal/gtest-param-util-generated.h:2854:61: error: expected class name
class Iterator : public ParamIteratorInterface<ParamType> {
^
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/include/gtest/internal/gtest-param-util-generated.h:2856:44: error: use of undeclared identifier 'ParamType'
Iterator(const ParamGeneratorInterface<ParamType>* base,
^
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/include/gtest/internal/gtest-param-util-generated.h:2868:43: error: use of undeclared identifier 'ParamType'
virtual const ParamGeneratorInterface<ParamType>* BaseGenerator() const {
^
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/include/gtest/internal/gtest-param-util-generated.h:2882:36: error: use of undeclared identifier 'ParamType'
virtual ParamIteratorInterface<ParamType>* Clone() const {
^
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/include/gtest/internal/gtest-param-util-generated.h:2885:19: error: unknown type name 'ParamType'
virtual const ParamType* Current() const { return ¤t_value_; }
^
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/include/gtest/internal/gtest-param-util-generated.h:2886:54: error: use of undeclared identifier 'ParamType'
virtual bool Equals(const ParamIteratorInterface<ParamType>& other) const {
^
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/include/gtest/internal/gtest-param-util-generated.h:2930:35: error: use of undeclared identifier 'ParamType'
const ParamGeneratorInterface<ParamType>* const base_;
^
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/include/gtest/internal/gtest-param-util-generated.h:2939:5: error: unknown type name 'ParamType'
ParamType current_value_;
^
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/include/gtest/internal/gtest-param-util-generated.h:2952:46: error: no member named 'tr1' in namespace 'std'
: public ParamGeneratorInterface< ::std::tr1::tuple<T1, T2, T3> > {
~~~~~~~^
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/include/gtest/internal/gtest-param-util-generated.h:2952:57: error: 'T1' does not refer to a value
: public ParamGeneratorInterface< ::std::tr1::tuple<T1, T2, T3> > {
^
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/include/gtest/internal/gtest-param-util-generated.h:2950:20: note: declared here
template <typename T1, typename T2, typename T3>
^
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/include/gtest/internal/gtest-param-util-generated.h:2952:69: error: expected class name
: public ParamGeneratorInterface< ::std::tr1::tuple<T1, T2, T3> > {
^
fatal error: too many errors emitted, stopping now [-ferror-limit=]
20 errors generated.
*** Error code 1
Stop.
make[3]: stopped in /wrkdirs/usr/ports/biology/avida/work/.build
*** Error code 1
Stop.
make[2]: stopped in /wrkdirs/usr/ports/biology/avida/work/.build
*** Error code 1
Stop.
make[1]: stopped in /wrkdirs/usr/ports/biology/avida/work/.build
*** Error code 1
Stop.
make: stopped in /usr/ports/biology/avida
===> Cleaning for avida-2.12.4
More information about the freebsd-pkg-fallout
mailing list