[REL - 91amd64-default][science/mpqc] Failed for mpqc-2.3.1_16 in build

pkg-fallout at FreeBSD.org pkg-fallout at FreeBSD.org
Wed Oct 23 15:16:13 UTC 2013


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer:     maho at FreeBSD.org
Last committer: bapt at FreeBSD.org
Ident:          $FreeBSD: head/science/mpqc/Makefile 327767 2013-09-20 22:48:30Z bapt $
Log URL:        http://beefy2.isc.freebsd.org/bulk/91amd64-default/2013-10-23_13h40m00s/logs/mpqc-2.3.1_16.log
Build URL:      http://beefy2.isc.freebsd.org/bulk/91amd64-default/2013-10-23_13h40m00s
Log:

====>> Building science/mpqc
build started at Wed Oct 23 14:57:40 UTC 2013
port directory: /usr/ports/science/mpqc
building for: FreeBSD 91amd64-default-job-10 9.1-RELEASE FreeBSD 9.1-RELEASE amd64
maintained by: maho at FreeBSD.org
Makefile ident:      $FreeBSD: head/science/mpqc/Makefile 327767 2013-09-20 22:48:30Z bapt $
Poudriere version: 3.1-pre

---Begin Environment---
OSVERSION=901000
UNAME_v=FreeBSD 9.1-RELEASE
UNAME_r=9.1-RELEASE
BLOCKSIZE=K
MAIL=/var/mail/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/games:/usr/local/sbin:/usr/local/bin:/root/bin
STATUS=1
MASTERMNT=/usr/local/poudriere/data/build/91amd64-default/ref
PKG_EXT=txz
tpid=98931
POUDRIERE_BUILD_TYPE=bulk
PKGNG=1
PKGNAME=mpqc-2.3.1_16
PKG_DELETE=/usr/local/sbin/pkg-static delete -y -f
PKG_ADD=/usr/local/sbin/pkg-static add
PWD=/root
MASTERNAME=91amd64-default
USER=root
HOME=/root
POUDRIERE_VERSION=3.1-pre
LOCALBASE=/usr/local
PACKAGE_BUILDING=yes
PKG_VERSION=/poudriere/pkg-static version
PKG_BIN=/usr/local/sbin/pkg-static
---End Environment---

---Begin OPTIONS List---
---End OPTIONS List---

--CONFIGURE_ARGS--
--with-cc=gcc46  --with-cxx=g++46  --with-f77=gfortran46  --with-libdirs=-L/usr/local/lib  --with-blas="-lblas"  --with-lapack="-llapack"  --with-coptflags="-O2 -pipe -Wl,-rpath=/usr/local/lib/gcc46 -fno-strict-aliasing"  --with-cxxoptflags="-O2 -pipe -Wl,-rpath=/usr/local/lib/gcc46 -fno-strict-aliasing -Wl,-rpath=/usr/local/lib/gcc46"  --with-f77optflags="-O -Wl,-rpath=/usr/local/lib/gcc46"  --enable-shared  --with-sc-datadir=/usr/local/share/mpqc/2.3.1 --with-include="-I/wrkdirs/usr/ports/science/mpqc/work -I/usr/local/include" --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
TMPDIR="/tmp" MAKE=gmake TMPDIR="/tmp" SHELL=/bin/sh CONFIG_SHELL=/bin/sh F77="gfortran46" FC="gfortran46" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc46" ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings"  AUTOCONF=/usr/local/bin/autoconf-2.69  AUTOCONF_DIR=/usr/local/share/autoconf-2.69  AUTOHEADER=/usr/local/bin/autoheader-2.69  AUTOIFNAMES=/usr/local/bin/ifnames-2.69  AUTOM4TE=/usr/local/bin/autom4te-2.69  AUTORECONF=/usr/local/bin/autoreconf-2.69  AUTOSCAN=/usr/local/bin/autoscan-2.69  AUTOUPDATE=/usr/local/bin/autoupdate-2.69  AUTOCONF_VERSION=2.69  CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
TMPDIR="/tmp" TMPDIR="/tmp" SHELL=/bin/sh NO_LINT=YES F77="gfortran46" FC="gfortran46" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc46" ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings"  AUTOCONF=/usr/local/bin/autoconf-2.69  AUTOCONF_DIR=/usr/local/share/autoconf-2.69  AUTOHEADER=/usr/local/bin/autoheader-2.69  AUTOIFNAMES=/usr/local/bin/ifnames-2.69  AUTOM4TE=/usr/local/bin/autom4te-2.69  AUTORECONF=/usr/local/bin/autoreconf-2.69  AUTOSCAN=/usr/local/bin/autoscan-2.69  AUTOUPDATE=/usr/local/bin/autoupdate-2.69  AUTOCONF_VERSION=2.69  PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="gcc46" CFLAGS="-O2 -pipe -Wl,-rpath=/usr/local/lib/gcc46 -fno-stri
 ct-aliasing"  CPP="cpp46" CPPFLAGS=""  LDFLAGS=" -Wl,-rpath=/usr/local/lib/gcc46"  CXX="g++46" CXXFLAGS="-O2 -pipe -Wl,-rpath=/usr/local/lib/gcc46 -fno-strict-aliasing -Wl,-rpath=/usr/local/lib/gcc46"  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -o root -g wheel -m 555"  BSD_INSTALL_LIB="install  -s -o root -g wheel -m 444"  BSD_INSTALL_SCRIPT="install  -o root -g wheel -m 555"  BSD_INSTALL_DATA="install  -o root -g wheel -m 444"  BSD_INSTALL_MAN="install  -o root -g wheel -m 444"
--End MAKE_ENV--

--SUB_LIST--
PREFIX=/usr/local
LOCALBASE=/usr/local
DATADIR=/usr/local/share/mpqc
DOCSDIR=/usr/local/share/doc/mpqc
EXAMPLESDIR=/usr/local/share/examples/mpqc
WWWDIR=/usr/local/www/mpqc
ETCDIR=/usr/local/etc/mpqc
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
#### /usr/local/etc/poudriere.d/make.conf ####
WITH_PKGNG=yes
NO_RESTRICTED=yes
DISABLE_MAKE_JOBS=poudriere
---End make.conf---
===>  Cleaning for mpqc-2.3.1_16
=======================<phase: check-config   >============================
===========================================================================
=======================<phase: pkg-depends    >============================
===>   mpqc-2.3.1_16 depends on file: /usr/local/sbin/pkg - not found
===>    Verifying install for /usr/local/sbin/pkg in /usr/ports/ports-mgmt/pkg
===>   Installing existing package /packages/All/pkg-1.1.4_8.txz
Installing pkg-1.1.4_8... done
If you are upgrading from the old package format, first run:

  # pkg2ng
===>   Returning to build of mpqc-2.3.1_16
===========================================================================
=======================<phase: fetch-depends  >============================
===========================================================================
=======================<phase: fetch          >============================
===> Fetching all distfiles required by mpqc-2.3.1_16 for building
===========================================================================
=======================<phase: checksum       >============================
===> Fetching all distfiles required by mpqc-2.3.1_16 for building
=> SHA256 Checksum OK for mpqc-2.3.1.tar.bz2.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract        >============================
===> Fetching all distfiles required by mpqc-2.3.1_16 for building
===>  Extracting for mpqc-2.3.1_16
=> SHA256 Checksum OK for mpqc-2.3.1.tar.bz2.
===========================================================================
=======================<phase: patch-depends  >============================
===========================================================================
=======================<phase: patch          >============================
===>  Patching for mpqc-2.3.1_16
===>  Applying FreeBSD patches for mpqc-2.3.1_16
===========================================================================
=======================<phase: build-depends  >============================
===>   mpqc-2.3.1_16 depends on executable: gmake - not found
===>    Verifying install for gmake in /usr/ports/devel/gmake
===>   Installing existing package /packages/All/gmake-3.82_1.txz
Installing gmake-3.82_1...Installing gettext-0.18.3.1...Installing libiconv-1.14_1... done
 done
 done
===>   Returning to build of mpqc-2.3.1_16
===>   mpqc-2.3.1_16 depends on executable: doxygen - not found
===>    Verifying install for doxygen in /usr/ports/devel/doxygen
===>   Installing existing package /packages/All/doxygen-1.8.3.1_1.txz
Installing doxygen-1.8.3.1_1...Installing perl-5.14.4_2...Removing stale symlinks from /usr/bin...
    Skipping /usr/bin/perl
    Skipping /usr/bin/perl5
Done.
Creating various symlinks in /usr/bin...
    Symlinking /usr/local/bin/perl5.14.4 to /usr/bin/perl
    Symlinking /usr/local/bin/perl5.14.4 to /usr/bin/perl5
Done.
Removing /usr/local/etc/perl5_version... Done.
Creating /usr/local/etc/perl5_version... Done.
 done
Installing png-1.5.17... done
 done
===>   Returning to build of mpqc-2.3.1_16
===>   mpqc-2.3.1_16 depends on executable: dot - not found
===>    Verifying install for dot in /usr/ports/graphics/graphviz
===>   Installing existing package /packages/All/graphviz-2.34.0.txz
Installing graphviz-2.34.0...Installing xproto-7.0.24... done
Installing xextproto-7.2.1... done
Installing xcb-util-renderutil-0.3.8...Installing xcb-util-0.3.9_1,1...Installing libxcb-1.9.1...Installing libXdmcp-1.1.1... done
Installing libXau-1.0.8... done
Installing libxml2-2.8.0_2...Installing pkgconf-0.9.3... done
 done
Installing libpthread-stubs-0.3_4... done
 done
 done
 done
Installing renderproto-0.11.1... done
Installing printproto-1.0.5... done
Installing pixman-0.30.2... done
Installing libXrender-0.9.8...Installing kbproto-1.0.6... done
Installing libX11-1.6.2,1... done
 done
Installing libXpm-3.5.11...Installing libXext-1.3.2,1... done
Installing libSM-1.2.2,1...Installing libICE-1.0.8,1... done
 done
Installing libXt-1.1.4,1... done
 done
Installing libXp-1.0.2,1... done
Installing pango-1.34.1_1...Installing xorg-fonts-truetype-7.7_1...Installing mkfontscale-1.1.1...Installing libfontenc-1.1.2... done
Installing freetype2-2.5.0.1... done
 done
Installing mkfontdir-1.0.7... done
Installing fontconfig-2.10.95,1...Installing expat-2.1.0... done
Running fc-cache to build fontconfig cache...
/usr/local/share/fonts: skipping, no such directory
/usr/local/lib/X11/fonts: caching, new cache contents: 0 fonts, 1 dirs
/usr/local/lib/X11/fonts/local: caching, new cache contents: 0 fonts, 0 dirs
/root/.local/share/fonts: skipping, no such directory
/root/.fonts: skipping, no such directory
/var/db/fontconfig: cleaning cache directory
/root/.cache/fontconfig: not cleaning non-existent cache directory
/root/.fontconfig: not cleaning non-existent cache directory
fc-cache: succeeded
 done
Installing font-util-1.3.0... done
Installing font-misc-meltho-1.0.3... done
Installing font-misc-ethiopic-1.0.3... done
Installing font-bh-ttf-1.0.3... done
Installing encodings-1.0.4,1... done
Installing dejavu-2.34... done
 done
Installing libXft-2.3.1... done
Installing harfbuzz-0.9.19...Installing python27-2.7.5_3... done
Installing python2-2_1... done
Installing python-2.7_1,2... done
Installing graphite2-1.2.3... done
Installing cairo-1.10.2_6,2...Installing pcre-8.33... done
Installing libffi-3.0.13... done
Installing glib-2.36.3...No schema files found: doing nothing.
 done
 done
Installing icu-50.1.2... done
 done
Installing gnomehier-3.0... done
 done
Installing libXmu-1.1.2,1... done
Installing libXaw-1.0.12,2... done
Installing tiff-4.0.3...Installing jpeg-8_4... done
Installing jbigkit-1.6... done
 done
<snip>
Generating docs for compound sc::MemAllocFailed...
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Generating docs for compound sc::ParallelRegionTimer...
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Generating docs for compound sc::PumaThreadGrp...
Generating docs for compound sc::ThreadLock...
Generating docs for compound sc::ThreadLockHolder...
Generating docs for compound sc::Thread...
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Generating docs for compound sc::GlobalMsgIter...
Generating docs for compound sc::MachineTopology...
Generating docs for compound sc::intlist_struct...
Generating docs for compound sc::ip_keyword_tree_struct...
Generating docs for compound sc::ip_keyword_tree_list_struct...
Generating docs for compound sc::ip_cwk_stack_struct...
Generating docs for compound sc::IPV2...
Generating docs for compound sc::ip_string_list_struct...
Generating docs for compound sc::KeyVal...
Generating docs for compound sc::AssignedKeyVal...
Generating docs for compound sc::StringKeyVal...
Generating docs for compound sc::AggregateKeyVal...
Generating docs for compound sc::PrefixKeyVal...
Generating docs for compound sc::ParsedKeyVal...
Generating docs for compound sc::KeyValValue...
Generating docs for compound sc::KeyValValuedouble...
Generating docs for compound sc::KeyValValueboolean...
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Generating docs for compound sc::KeyValValuestring...
Generating docs for compound sc::KeyValValueRefDescribedClass...
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Generating docs for compound sc::auto_vec...
Generating docs for compound sc::Debugger...
Generating docs for compound sc::CCAEnv...
Generating docs for compound sc::Result...
Generating docs for compound sc::NCResult...
Generating docs for compound sc::AccResult...
Generating docs for compound sc::SSAccResult...
Generating docs for compound sc::NCAccResult...
Generating docs for compound sc::Compute...
Generating docs for compound sc::ResultInfo...
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Generating docs for compound sc::ExEnv...
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Generating docs for compound sc::scprintf...
Generating docs for compound sc::TimedRegion...
Generating docs for compound sc::RegionTimer...
Generating docs for compound sc::Timer...
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Generating docs for compound sc::Identifier...
Generating docs for compound sc::Identity...
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Generating docs for compound sc::vec2...
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Generating docs for compound sc::TranslateData...
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Generating graph info page...
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Generating dependency graph for directory basis
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Generating dependency graph for directory chemistry
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Generating dependency graph for directory mbptr12
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Generating dependency graph for directory mpqc
Generating dependency graph for directory oint3
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Generating dependency graph for directory psi
Generating dependency graph for dilatex: not found
Problems running latex. Check your installation or look for typos in _formulas.tex and check _formulas.log!
dvips: not found
Problems running dvips. Check your installation!
error: Could not read image `/wrkdirs/usr/ports/science/mpqc/work/mpqc-2.3.1/doc/html/classsc_1_1BeckeIntegrationWeight__inherit__graph.png' generated by dot!
gmake: *** [html] Segmentation fault: 11 (core dumped)
*** [do-build] Error code 2

Stop in /usr/ports/science/mpqc.
===>  Cleaning for mpqc-2.3.1_16


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