[package - 121armv7-quarterly][science/avogadrolibs] Failed for avogadrolibs-1.93.0 in build

pkg-fallout at FreeBSD.org pkg-fallout at FreeBSD.org
Thu Oct 22 01:33:00 UTC 2020


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer:     yuri at FreeBSD.org
Last committer: yuri at FreeBSD.org
Ident:          $FreeBSD: branches/2020Q4/science/avogadrolibs/Makefile 533149 2020-04-27 16:09:56Z yuri $
Log URL:        http://beefy13.nyi.freebsd.org/data/121armv7-quarterly/552909/logs/avogadrolibs-1.93.0.log
Build URL:      http://beefy13.nyi.freebsd.org/build.html?mastername=121armv7-quarterly&build=552909
Log:

=>> Building science/avogadrolibs
build started at Thu Oct 22 01:21:15 UTC 2020
port directory: /usr/ports/science/avogadrolibs
package name: avogadrolibs-1.93.0
building for: FreeBSD 121armv7-quarterly-job-12 12.1-RELEASE-p10 FreeBSD 12.1-RELEASE-p10 1201000 arm
maintained by: yuri at FreeBSD.org
Makefile ident:      $FreeBSD: branches/2020Q4/science/avogadrolibs/Makefile 533149 2020-04-27 16:09:56Z yuri $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300121
Jail OSVERSION: 1201000
Job Id: 12

---Begin Environment---
SHELL=/bin/csh
UNAME_p=armv7
UNAME_m=arm
ABI_FILE=/usr/lib/crt1.o
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p10 1201000
UNAME_r=12.1-RELEASE-p10
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
QEMU_EMULATING=1
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121armv7-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121armv7-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121armv7-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121armv7-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for avogadrolibs-1.93.0:
     HDF5=off: HDF-5 data format support
     LIBARCHIVE=on: Enable optional Libarchive features
     LIBMSYM=on: Enable optional features using libmsym
     MOLEQUEUE=on: Enable the MoleQueue dependent functionality
     OPENGL=on: 2D/3D rendering support via OpenGL
     QT5=on: Qt 5 toolkit support
     SPGLIB=on: Enable optional features using spglib
     VTK=off: Enable libraries that use VTK
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
yuri at FreeBSD.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
QT_SELECT=qt5 QMAKEMODULES="/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/mkspecs/modules:/usr/local/lib/qt5/mkspecs/modules" XDG_DATA_HOME=/wrkdirs/usr/ports/science/avogadrolibs/work  XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/avogadrolibs/work  HOME=/wrkdirs/usr/ports/science/avogadrolibs/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/avogadrolibs/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh CMAKE_PREFIX_PATH="/usr/local"
--End CONFIGURE_ENV--

--MAKE_ENV--
QT_SELECT=qt5 QMAKEMODULES="/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/mkspecs/modules:/usr/local/lib/qt5/mkspecs/modules" XDG_DATA_HOME=/wrkdirs/usr/ports/science/avogadrolibs/work  XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/avogadrolibs/work  HOME=/wrkdirs/usr/ports/science/avogadrolibs/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/avogadrolibs/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES DESTDIR=/wrkdirs/usr/ports/science/avogadrolibs/work/stage PREFIX=/usr/local  LOCALBASE=/usr/local  CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe  -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing "  CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS="-isystem /usr/local/include"  LDFLAGS=" -fstack-protector-strong " LIBS="-L/usr/local/lib"  CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-ali
 asing  -isystem /usr/local/include "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
HDF5="@comment " NO_HDF5="" LIBARCHIVE="" NO_LIBARCHIVE="@comment " LIBMSYM="" NO_LIBMSYM="@comment " MOLEQUEUE="" NO_MOLEQUEUE="@comment " OPENGL="" NO_OPENGL="@comment " QT5="" NO_QT5="@comment " SPGLIB="" NO_SPGLIB="@comment " VTK="@comment " NO_VTK="" CMAKE_BUILD_TYPE="release" QT_BINDIR="lib/qt5/bin" QT_INCDIR="include/qt5" QT_LIBDIR="lib/qt5" QT_ARCHDIR="lib/qt5" QT_PLUGINDIR="lib/qt5/plugins" QT_LIBEXECDIR="libexec/qt5" QT_IMPORTDIR="lib/qt5/imports" QT_QMLDIR="lib/qt5/qml" QT_DATADIR="share/qt5" QT_DOCDIR="share/doc/qt5" QT_L10NDIR="share/qt5/translations" QT_EXAMPLEDIR="share/examples/qt5" QT_TESTDIR="share/qt5/tests" QT_MKSPECDIR="lib/qt5/mkspecs" QT_QTCHOOSERDIR="etc/xdg/qtchooser" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/avogadrolibs"  EXAMPLESDIR="share/examples/avogadrolibs"  DATADIR="share/avogadrolibs"  WWWDIR="www/avogadrolibs"  ETCDIR="etc/avogadrolibs"
--End PLIST_SUB--

--SUB_LIST--
HDF5="@comment " NO_HDF5="" LIBARCHIVE="" NO_LIBARCHIVE="@comment " LIBMSYM="" NO_LIBMSYM="@comment " MOLEQUEUE="" NO_MOLEQUEUE="@comment " OPENGL="" NO_OPENGL="@comment " QT5="" NO_QT5="@comment " SPGLIB="" NO_SPGLIB="@comment " VTK="@comment " NO_VTK="" PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/avogadrolibs DOCSDIR=/usr/local/share/doc/avogadrolibs EXAMPLESDIR=/usr/local/share/examples/avogadrolibs  WWWDIR=/usr/local/www/avogadrolibs ETCDIR=/usr/local/etc/avogadrolibs
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=arm
MACHINE_ARCH=armv7
ARCH=${MACHINE_ARCH}
#### /usr/local/etc/poudriere.d/make.conf ####
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
#### /usr/ports/Mk/Scripts/ports_env.sh ####
_CCVERSION_9d218390=FreeBSD clang version 8.0.1 (tags/RELEASE_801/final 366581) (based on LLVM 8.0.1) Target: armv7-unknown-freebsd12.1-gnueabihf Thread model: posix InstalledDir: /nxb-bin/usr/bin
_ALTCCVERSION_9d218390=none
_CXXINTERNAL_9c45a5b1=FreeBSD clang version 8.0.1 (tags/RELEASE_801/final 366581) (based on LLVM 8.0.1) Target: armv7-unknown-freebsd12.1-gnueabihf Thread model: posix InstalledDir: /nxb-bin/usr/bin "/nxb-bin/usr/bin/ld" "--eh-frame-hdr" "-dynamic-linker" "/libexec/ld-elf.so.1" "--hash-style=both" "--enable-new-dtags" "-o" "a.out" "/usr/lib/crt1.o" "/usr/lib/crti.o" "/usr/lib/crtbegin.o" "-L/usr/lib" "/dev/null" "-lc++" "-lm" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "-lc" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "/usr/lib/crtend.o" "/usr/lib/crtn.o"
CC_OUTPUT_9d218390_58173849=yes
CC_OUTPUT_9d218390_9bdba57c=yes
CC_OUTPUT_9d218390_6a4fe7f5=yes
CC_OUTPUT_9d218390_6bcac02b=yes
CC_OUTPUT_9d218390_67d20829=yes
CC_OUTPUT_9d218390_bfa62e83=yes
CC_OUTPUT_9d218390_f0b4d593=yes
CC_OUTPUT_9d218390_308abb44=yes
CC_OUTPUT_9d218390_f00456e5=yes
CC_OUTPUT_9d218390_65ad290d=yes
CC_OUTPUT_9d218390_f2776b26=yes
CC_OUTPUT_9d218390_b2657cc3=yes
CC_OUTPUT_9d218390_380987f7=yes
CC_OUTPUT_9d218390_160933ec=yes
CC_OUTPUT_9d218390_fb62803b=yes
_OBJC_CCVERSION_9d218390=FreeBSD clang version 8.0.1 (tags/RELEASE_801/final 366581) (based on LLVM 8.0.1) Target: armv7-unknown-freebsd12.1-gnueabihf Thread model: posix InstalledDir: /nxb-bin/usr/bin
_OBJC_ALTCCVERSION_9d218390=none
ARCH=armv7
OPSYS=FreeBSD
_OSRELEASE=12.1-RELEASE-p10
OSREL=12.1
OSVERSION=1201000
PYTHONBASE=/usr/local
CONFIGURE_MAX_CMD_LEN=524288
HAVE_PORTS_ENV=1
#### Misc Poudriere ####
GID=0
UID=0
DISABLE_MAKE_JOBS=poudriere
---End make.conf---
---Begin make.nxb.conf---
CC=/nxb-bin/usr/bin/cc
CPP=/nxb-bin/usr/bin/cpp
CXX=/nxb-bin/usr/bin/c++
AS=/nxb-bin/usr/bin/as
NM=/nxb-bin/usr/bin/nm
LD=/nxb-bin/usr/bin/ld
OBJCOPY=/nxb-bin/usr/bin/objcopy
SIZE=/nxb-bin/usr/bin/size
STRIPBIN=/nxb-bin/usr/bin/strip
SED=/nxb-bin/usr/bin/sed
RANLIB=/nxb-bin/usr/bin/ranlib
YACC=/nxb-bin/usr/bin/yacc
MAKE=/nxb-bin/usr/bin/make
STRINGS=/nxb-bin/usr/bin/strings
AWK=/nxb-bin/usr/bin/awk
FLEX=/nxb-bin/usr/bin/flex
---End make.nxb.conf---
--Resource limits--
cpu time               (seconds, -t)  unlimited
file size           (512-blocks, -f)  unlimited
data seg size           (kbytes, -d)  33554432
stack size              (kbytes, -s)  524288
core file size      (512-blocks, -c)  unlimited
max memory size         (kbytes, -m)  unlimited
locked memory           (kbytes, -l)  unlimited
max user processes              (-u)  89999
open files                      (-n)  1024
virtual mem size        (kbytes, -v)  unlimited
swap limit              (kbytes, -w)  unlimited
socket buffer size       (bytes, -b)  unlimited
pseudo-terminals                (-p)  unlimited
kqueues                         (-k)  unlimited
umtx shared locks               (-o)  unlimited
--End resource limits--
=======================<phase: check-sanity   >============================
===>  License GPLv2 accepted by the user
===========================================================================
=======================<phase: pkg-depends    >============================
===>   avogadrolibs-1.93.0 depends on file: /usr/local/sbin/pkg - not found
===>   Installing existing package /packages/All/pkg-1.15.10.txz
[121armv7-quarterly-job-12] Installing pkg-1.15.10...
[121armv7-quarterly-job-12] Extracting pkg-1.15.10: .......... done
===>   avogadrolibs-1.93.0 depends on file: /usr/local/sbin/pkg - found
===>   Returning to build of avogadrolibs-1.93.0
===========================================================================
=======================<phase: fetch-depends  >============================
===========================================================================
=======================<phase: fetch          >============================
===>  License GPLv2 accepted by the user
===> Fetching all distfiles required by avogadrolibs-1.93.0 for building
===========================================================================
=======================<phase: checksum       >============================
===>  License GPLv2 accepted by the user
===> Fetching all distfiles required by avogadrolibs-1.93.0 for building
=> SHA256 Checksum OK for OpenChemistry-avogadrolibs-1.93.0_GH0.tar.gz.
<snip>
[427/475] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/bondcentrictool/BondCentric_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/bondcentrictool -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/bondcentrictool/CMakeFiles/B
 ondCentric.dir/BondCentricPlugin.cpp.o -MF avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/BondCentricPlugin.cpp.o.d -o avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/BondCentricPlugin.cpp.o -c avogadro/qtplugins/bondcentrictool/BondCentricPlugin.cpp
[428/475] : && /usr/local/bin/cmake -E rm -f lib/avogadro2/staticplugins/BondCentric.a && /nxb-bin/usr/bin/ar qc lib/avogadro2/staticplugins/BondCentric.a  avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/BondCentric_autogen/mocs_compilation.cpp.o avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/bondcentrictool.cpp.o avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/qrc_bondcentrictool.cpp.o avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/BondCentricPlugin.cpp.o && /nxb-bin/usr/bin/ranlib lib/avogadro2/staticplugins/BondCentric.a && :
[429/475] cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/crystal && /usr/local/lib/qt5/bin/uic -o /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/crystal/ui_importcrystaldialog.h /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/crystal/importcrystaldialog.ui
[430/475] cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/crystal && /usr/local/lib/qt5/bin/uic -o /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/crystal/ui_volumescalingdialog.h /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/crystal/volumescalingdialog.ui
[431/475] cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/crystal && /usr/local/lib/qt5/bin/uic -o /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/crystal/ui_supercelldialog.h /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/crystal/supercelldialog.ui
[432/475] cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/crystal && /usr/local/lib/qt5/bin/uic -o /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/crystal/ui_unitcelldialog.h /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/crystal/unitcelldialog.ui
[433/475] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/crystal/Crystal_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/crystal -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/volumescalingdial
 og.cpp.o -MF avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/volumescalingdialog.cpp.o.d -o avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/volumescalingdialog.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/crystal/volumescalingdialog.cpp
[434/475] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/crystal/Crystal_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/crystal -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/CrystalPlugin.cpp
 .o -MF avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/CrystalPlugin.cpp.o.d -o avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/CrystalPlugin.cpp.o -c avogadro/qtplugins/crystal/CrystalPlugin.cpp
[435/475] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/crystal/Crystal_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/crystal -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/Crystal_autogen/m
 ocs_compilation.cpp.o -MF avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/Crystal_autogen/mocs_compilation.cpp.o.d -o avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/Crystal_autogen/mocs_compilation.cpp.o -c avogadro/qtplugins/crystal/Crystal_autogen/mocs_compilation.cpp
[436/475] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/crystal/Crystal_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/crystal -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/crystal.cpp.o -MF
  avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/crystal.cpp.o.d -o avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/crystal.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/crystal/crystal.cpp
[437/475] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/crystal/Crystal_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/crystal -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/importcrystaldial
 og.cpp.o -MF avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/importcrystaldialog.cpp.o.d -o avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/importcrystaldialog.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/crystal/importcrystaldialog.cpp
[438/475] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/crystal/Crystal_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/crystal -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/supercelldialog.c
 pp.o -MF avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/supercelldialog.cpp.o.d -o avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/supercelldialog.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/crystal/supercelldialog.cpp
[439/475] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/crystal/Crystal_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/crystal -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/unitcelldialog.cp
 p.o -MF avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/unitcelldialog.cpp.o.d -o avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/unitcelldialog.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/crystal/unitcelldialog.cpp
/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/crystal/unitcelldialog.cpp:321:30: warning: 'width' is deprecated: Use QFontMetrics::horizontalAdvance [-Wdeprecated-declarations]
  int minWidth = 3 * metrics.width('0') * (MATRIX_WIDTH + 1);
                             ^
/usr/local/include/qt5/QtGui/qfontmetrics.h:109:5: note: 'width' has been explicitly marked deprecated here
    QT_DEPRECATED_X("Use QFontMetrics::horizontalAdvance")
    ^
/usr/local/include/qt5/QtCore/qglobal.h:294:33: note: expanded from macro 'QT_DEPRECATED_X'
#  define QT_DEPRECATED_X(text) Q_DECL_DEPRECATED_X(text)
                                ^
/usr/local/include/qt5/QtCore/qcompilerdetection.h:675:55: note: expanded from macro 'Q_DECL_DEPRECATED_X'
#    define Q_DECL_DEPRECATED_X(text) __attribute__ ((__deprecated__(text)))
                                                      ^
/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/crystal/unitcelldialog.cpp:363:31: warning: 'split' is deprecated: Use Qt::SplitBehavior variant instead [-Wdeprecated-declarations]
    QStringList values = line.split(MATRIX_SEP, QString::SkipEmptyParts);
                              ^
/usr/local/include/qt5/QtCore/qstring.h:616:23: note: 'split' has been explicitly marked deprecated here
    Q_REQUIRED_RESULT QT_DEPRECATED_VERSION_X_5_15("Use Qt::SplitBehavior variant instead")
                      ^
/usr/local/include/qt5/QtCore/qglobal.h:372:45: note: expanded from macro 'QT_DEPRECATED_VERSION_X_5_15'
# define QT_DEPRECATED_VERSION_X_5_15(text) QT_DEPRECATED_X(text)
                                            ^
/usr/local/include/qt5/QtCore/qglobal.h:294:33: note: expanded from macro 'QT_DEPRECATED_X'
#  define QT_DEPRECATED_X(text) Q_DECL_DEPRECATED_X(text)
                                ^
/usr/local/include/qt5/QtCore/qcompilerdetection.h:675:55: note: expanded from macro 'Q_DECL_DEPRECATED_X'
#    define Q_DECL_DEPRECATED_X(text) __attribute__ ((__deprecated__(text)))
                                                      ^
2 warnings generated.
[440/475] : && /usr/local/bin/cmake -E rm -f lib/avogadro2/staticplugins/Crystal.a && /nxb-bin/usr/bin/ar qc lib/avogadro2/staticplugins/Crystal.a  avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/Crystal_autogen/mocs_compilation.cpp.o avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/crystal.cpp.o avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/importcrystaldialog.cpp.o avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/supercelldialog.cpp.o avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/unitcelldialog.cpp.o avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/volumescalingdialog.cpp.o avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/CrystalPlugin.cpp.o && /nxb-bin/usr/bin/ranlib lib/avogadro2/staticplugins/Crystal.a && :
[441/475] cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/3dmol && /usr/local/bin/cmake -E cmake_autogen /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol_autogen.dir/AutogenInfo.json Release && /usr/local/bin/cmake -E touch /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/3dmol/ThreeDMol_autogen/timestamp
[442/475] cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/3dmol && /usr/local/lib/qt5/bin/uic -o /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/3dmol/ui_3dmoldialog.h /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/3dmol/3dmoldialog.ui
[443/475] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/3dmol/ThreeDMol_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/3dmol -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/ThreeDMol_autogen/m
 ocs_compilation.cpp.o -MF avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/ThreeDMol_autogen/mocs_compilation.cpp.o.d -o avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/ThreeDMol_autogen/mocs_compilation.cpp.o -c avogadro/qtplugins/3dmol/ThreeDMol_autogen/mocs_compilation.cpp
[444/475] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/3dmol/ThreeDMol_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/3dmol -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/3dmol.cpp.o -MF avo
 gadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/3dmol.cpp.o.d -o avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/3dmol.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/3dmol/3dmol.cpp
[445/475] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/3dmol/ThreeDMol_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/3dmol -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/3dmoldialog.cpp.o -
 MF avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/3dmoldialog.cpp.o.d -o avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/3dmoldialog.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/3dmol/3dmoldialog.cpp
[446/475] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/3dmol/ThreeDMol_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/3dmol -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/ThreeDMolPlugin.cpp
 .o -MF avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/ThreeDMolPlugin.cpp.o.d -o avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/ThreeDMolPlugin.cpp.o -c avogadro/qtplugins/3dmol/ThreeDMolPlugin.cpp
[447/475] : && /usr/local/bin/cmake -E rm -f lib/avogadro2/staticplugins/ThreeDMol.a && /nxb-bin/usr/bin/ar qc lib/avogadro2/staticplugins/ThreeDMol.a  avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/ThreeDMol_autogen/mocs_compilation.cpp.o avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/3dmol.cpp.o avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/3dmoldialog.cpp.o avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/ThreeDMolPlugin.cpp.o && /nxb-bin/usr/bin/ranlib lib/avogadro2/staticplugins/ThreeDMol.a && :
[448/475] : && /nxb-bin/usr/bin/c++ -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -fstack-protector-strong avogadro/command/CMakeFiles/avobabel.dir/avobabel.cpp.o -o bin/avobabel  -Wl,-rpath,/wrkdirs/usr/ports/science/avogadrolibs/work/.build/lib  lib/libAvogadroIO.so.1.93.0  lib/libAvogadroCore.so.1.93.0 && :
[449/475] : && /nxb-bin/usr/bin/c++ -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -fstack-protector-strong avogadro/command/CMakeFiles/avocjsontocml.dir/cjsontocml.cpp.o -o bin/avocjsontocml  -Wl,-rpath,/wrkdirs/usr/ports/science/avogadrolibs/work/.build/lib  lib/libAvogadroIO.so.1.93.0  lib/libAvogadroCore.so.1.93.0 && :
[450/475] /nxb-bin/usr/bin/c++ -DAvogadroQuantumIO_EXPORTS -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -isystem /usr/local/include/eigen3 -isystem /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/thirdparty -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++11 -MD -MT avogadro/quantumio/CMakeFiles/AvogadroQuantumIO.dir/gamessus.cpp.o -MF avogadro/quantumio/CMakeFiles/AvogadroQuantumIO.dir/gamessus.cpp.o.d -o avogadro/quantumio/CMakeFiles/AvogadroQuantumIO.dir/gamessus.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/quantumio/gamessus.cpp
[451/475] /nxb-bin/usr/bin/c++ -DAvogadroQuantumIO_EXPORTS -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -isystem /usr/local/include/eigen3 -isystem /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/thirdparty -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++11 -MD -MT avogadro/quantumio/CMakeFiles/AvogadroQuantumIO.dir/gaussianfchk.cpp.o -MF avogadro/quantumio/CMakeFiles/AvogadroQuantumIO.dir/gaussianfchk.cpp.o.d -o avogadro/quantumio/CMakeFiles/AvogadroQuantumIO.dir/gaussianfchk.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/quantumio/gaussianfchk.cpp
[452/475] /nxb-bin/usr/bin/c++ -DAvogadroQuantumIO_EXPORTS -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -isystem /usr/local/include/eigen3 -isystem /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/thirdparty -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++11 -MD -MT avogadro/quantumio/CMakeFiles/AvogadroQuantumIO.dir/gaussiancube.cpp.o -MF avogadro/quantumio/CMakeFiles/AvogadroQuantumIO.dir/gaussiancube.cpp.o.d -o avogadro/quantumio/CMakeFiles/AvogadroQuantumIO.dir/gaussiancube.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/quantumio/gaussiancube.cpp
[453/475] : && /nxb-bin/usr/bin/c++ -fPIC -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include  -fstack-protector-strong -shared -Wl,-soname,libAvogadroQuantumIO.so.1 -o lib/libAvogadroQuantumIO.so.1.93.0 avogadro/quantumio/CMakeFiles/AvogadroQuantumIO.dir/gamessus.cpp.o avogadro/quantumio/CMakeFiles/AvogadroQuantumIO.dir/gaussianfchk.cpp.o avogadro/quantumio/CMakeFiles/AvogadroQuantumIO.dir/gaussiancube.cpp.o avogadro/quantumio/CMakeFiles/AvogadroQuantumIO.dir/molden.cpp.o avogadro/quantumio/CMakeFiles/AvogadroQuantumIO.dir/mopacaux.cpp.o avogadro/quantumio/CMakeFiles/AvogadroQuantumIO.dir/nwchemjson.cpp.o avogadro/quantumio/CMakeFiles/AvogadroQuantumIO.dir/nwchemlog.cpp.o  -Wl,-rpath,/wrkdirs/usr/ports/science/avogadrolibs/work/.build/lib:  lib/libAvogadroIO.so.1.93.0  lib/libAvogadroCore.so.1.93.0 && :
[454/475] /usr/local/bin/cmake -E cmake_symlink_library lib/libAvogadroQuantumIO.so.1.93.0  lib/libAvogadroQuantumIO.so.1 lib/libAvogadroQuantumIO.so && :
[455/475] cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/scriptfileformats && /usr/local/bin/cmake -E cmake_autogen /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats_autogen.dir/AutogenInfo.json Release && /usr/local/bin/cmake -E touch /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/scriptfileformats/ScriptFileFormats_autogen/timestamp
[456/475] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/scriptfileformats/ScriptFileFormats_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/scriptfileformats -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/scriptfileformats/
 CMakeFiles/ScriptFileFormats.dir/fileformatscript.cpp.o -MF avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/fileformatscript.cpp.o.d -o avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/fileformatscript.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/scriptfileformats/fileformatscript.cpp
[457/475] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/scriptfileformats/ScriptFileFormats_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/scriptfileformats -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/scriptfileformats/
 CMakeFiles/ScriptFileFormats.dir/ScriptFileFormats_autogen/mocs_compilation.cpp.o -MF avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/ScriptFileFormats_autogen/mocs_compilation.cpp.o.d -o avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/ScriptFileFormats_autogen/mocs_compilation.cpp.o -c avogadro/qtplugins/scriptfileformats/ScriptFileFormats_autogen/mocs_compilation.cpp
[458/475] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/scriptfileformats/ScriptFileFormats_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/scriptfileformats -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/scriptfileformats/
 CMakeFiles/ScriptFileFormats.dir/scriptfileformats.cpp.o -MF avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/scriptfileformats.cpp.o.d -o avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/scriptfileformats.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/scriptfileformats/scriptfileformats.cpp
[459/475] /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/scriptfileformats/ScriptFileFormats_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/scriptfileformats -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/scriptfileformats/
 CMakeFiles/ScriptFileFormats.dir/ScriptFileFormatsPlugin.cpp.o -MF avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/ScriptFileFormatsPlugin.cpp.o.d -o avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/ScriptFileFormatsPlugin.cpp.o -c avogadro/qtplugins/scriptfileformats/ScriptFileFormatsPlugin.cpp
[460/475] : && /usr/local/bin/cmake -E rm -f lib/avogadro2/staticplugins/ScriptFileFormats.a && /nxb-bin/usr/bin/ar qc lib/avogadro2/staticplugins/ScriptFileFormats.a  avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/ScriptFileFormats_autogen/mocs_compilation.cpp.o avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/scriptfileformats.cpp.o avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/fileformatscript.cpp.o avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/ScriptFileFormatsPlugin.cpp.o && /nxb-bin/usr/bin/ranlib lib/avogadro2/staticplugins/ScriptFileFormats.a && :
[461/475] cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/surfaces && /usr/local/bin/cmake -E cmake_autogen /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/surfaces/CMakeFiles/Surfaces_autogen.dir/AutogenInfo.json Release && /usr/local/bin/cmake -E touch /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/surfaces/Surfaces_autogen/timestamp
[462/475] cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/surfaces && /usr/local/lib/qt5/bin/uic -o /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/surfaces/ui_surfacedialog.h /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/surfaces/surfacedialog.ui
[463/475] /nxb-bin/usr/bin/c++ -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/surfaces/Surfaces_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/surfaces -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -isystem /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/thirdparty/libgwavi -isystem /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/thirdparty/gif-h -isystem /usr/local/include/qt5/QtConcurrent -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -O2 -p
 ipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/Surfaces_autogen/mocs_compilation.cpp.o -MF avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/Surfaces_autogen/mocs_compilation.cpp.o.d -o avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/Surfaces_autogen/mocs_compilation.cpp.o -c avogadro/qtplugins/surfaces/Surfaces_autogen/mocs_compilation.cpp
In file included from avogadro/qtplugins/surfaces/Surfaces_autogen/mocs_compilation.cpp:4:
In file included from avogadro/qtplugins/surfaces/Surfaces_autogen/EWIEGA46WW/moc_surfacedialog.cpp:10:
In file included from avogadro/qtplugins/surfaces/Surfaces_autogen/EWIEGA46WW/../../../../../../avogadrolibs-1.93.0/avogadro/qtplugins/surfaces/surfacedialog.h:23:
avogadro/qtplugins/surfaces/Surfaces_autogen/EWIEGA46WW/../../../../../../avogadrolibs-1.93.0/avogadro/qtplugins/surfaces/surfaces.h:70:11: warning: 'name' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
  QString name() const { return tr("Surfaces"); }
          ^
/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtgui/extensionplugin.h:61:19: note: overridden virtual function is here
  virtual QString name() const = 0;
                  ^
In file included from avogadro/qtplugins/surfaces/Surfaces_autogen/mocs_compilation.cpp:4:
In file included from avogadro/qtplugins/surfaces/Surfaces_autogen/EWIEGA46WW/moc_surfacedialog.cpp:10:
In file included from avogadro/qtplugins/surfaces/Surfaces_autogen/EWIEGA46WW/../../../../../../avogadrolibs-1.93.0/avogadro/qtplugins/surfaces/surfacedialog.h:23:
avogadro/qtplugins/surfaces/Surfaces_autogen/EWIEGA46WW/../../../../../../avogadrolibs-1.93.0/avogadro/qtplugins/surfaces/surfaces.h:71:11: warning: 'description' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
  QString description() const { return tr("Read and render surfaces."); }
          ^
/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtgui/extensionplugin.h:67:19: note: overridden virtual function is here
  virtual QString description() const = 0;
                  ^
In file included from avogadro/qtplugins/surfaces/Surfaces_autogen/mocs_compilation.cpp:4:
In file included from avogadro/qtplugins/surfaces/Surfaces_autogen/EWIEGA46WW/moc_surfacedialog.cpp:10:
avogadro/qtplugins/surfaces/Surfaces_autogen/EWIEGA46WW/../../../../../../avogadrolibs-1.93.0/avogadro/qtplugins/surfaces/surfacedialog.h:43:54: warning: 'QFlags' is deprecated: Use default constructor instead [-Wdeprecated-declarations]
  SurfaceDialog(QWidget* parent = 0, Qt::WindowFlags f = 0);
                                                     ^
/usr/local/include/qt5/QtCore/qflags.h:123:5: note: 'QFlags' has been explicitly marked deprecated here
    QT_DEPRECATED_X("Use default constructor instead") Q_DECL_CONSTEXPR inline QFlags(Zero) noexcept : i(0) {}
    ^
/usr/local/include/qt5/QtCore/qglobal.h:294:33: note: expanded from macro 'QT_DEPRECATED_X'
#  define QT_DEPRECATED_X(text) Q_DECL_DEPRECATED_X(text)
                                ^
/usr/local/include/qt5/QtCore/qcompilerdetection.h:675:55: note: expanded from macro 'Q_DECL_DEPRECATED_X'
#    define Q_DECL_DEPRECATED_X(text) __attribute__ ((__deprecated__(text)))
                                                      ^
3 warnings generated.
[464/475] /nxb-bin/usr/bin/c++ -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/surfaces/Surfaces_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/surfaces -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -isystem /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/thirdparty/libgwavi -isystem /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/thirdparty/gif-h -isystem /usr/local/include/qt5/QtConcurrent -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -O2 -p
 ipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/gaussiansetconcurrent.cpp.o -MF avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/gaussiansetconcurrent.cpp.o.d -o avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/gaussiansetconcurrent.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/surfaces/gaussiansetconcurrent.cpp
[465/475] /nxb-bin/usr/bin/c++ -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/surfaces/Surfaces_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/surfaces -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -isystem /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/thirdparty/libgwavi -isystem /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/thirdparty/gif-h -isystem /usr/local/include/qt5/QtConcurrent -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -O2 -p
 ipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/slatersetconcurrent.cpp.o -MF avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/slatersetconcurrent.cpp.o.d -o avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/slatersetconcurrent.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/surfaces/slatersetconcurrent.cpp
[466/475] /nxb-bin/usr/bin/c++ -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/surfaces/Surfaces_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/surfaces -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -isystem /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/thirdparty/libgwavi -isystem /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/thirdparty/gif-h -isystem /usr/local/include/qt5/QtConcurrent -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -O2 -p
 ipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/surfacedialog.cpp.o -MF avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/surfacedialog.cpp.o.d -o avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/surfacedialog.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/surfaces/surfacedialog.cpp
In file included from /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/surfaces/surfacedialog.cpp:18:
In file included from /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/surfaces/surfacedialog.h:23:
/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/surfaces/surfaces.h:70:11: warning: 'name' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
  QString name() const { return tr("Surfaces"); }
          ^
/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtgui/extensionplugin.h:61:19: note: overridden virtual function is here
  virtual QString name() const = 0;
                  ^
In file included from /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/surfaces/surfacedialog.cpp:18:
In file included from /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/surfaces/surfacedialog.h:23:
/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/surfaces/surfaces.h:71:11: warning: 'description' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
  QString description() const { return tr("Read and render surfaces."); }
          ^
/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtgui/extensionplugin.h:67:19: note: overridden virtual function is here
  virtual QString description() const = 0;
                  ^
In file included from /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/surfaces/surfacedialog.cpp:18:
/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/surfaces/surfacedialog.h:43:54: warning: 'QFlags' is deprecated: Use default constructor instead [-Wdeprecated-declarations]
  SurfaceDialog(QWidget* parent = 0, Qt::WindowFlags f = 0);
                                                     ^
/usr/local/include/qt5/QtCore/qflags.h:123:5: note: 'QFlags' has been explicitly marked deprecated here
    QT_DEPRECATED_X("Use default constructor instead") Q_DECL_CONSTEXPR inline QFlags(Zero) noexcept : i(0) {}
    ^
/usr/local/include/qt5/QtCore/qglobal.h:294:33: note: expanded from macro 'QT_DEPRECATED_X'
#  define QT_DEPRECATED_X(text) Q_DECL_DEPRECATED_X(text)
                                ^
/usr/local/include/qt5/QtCore/qcompilerdetection.h:675:55: note: expanded from macro 'Q_DECL_DEPRECATED_X'
#    define Q_DECL_DEPRECATED_X(text) __attribute__ ((__deprecated__(text)))
                                                      ^
3 warnings generated.
[467/475] /nxb-bin/usr/bin/c++ -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/surfaces/Surfaces_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/surfaces -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -isystem /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/thirdparty/libgwavi -isystem /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/thirdparty/gif-h -isystem /usr/local/include/qt5/QtConcurrent -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -O2 -p
 ipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/surfaces.cpp.o -MF avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/surfaces.cpp.o.d -o avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/surfaces.cpp.o -c /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/surfaces/surfaces.cpp
In file included from /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/surfaces/surfaces.cpp:17:
/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/surfaces/surfaces.h:70:11: warning: 'name' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
  QString name() const { return tr("Surfaces"); }
          ^
/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtgui/extensionplugin.h:61:19: note: overridden virtual function is here
  virtual QString name() const = 0;
                  ^
In file included from /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/surfaces/surfaces.cpp:17:
/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/surfaces/surfaces.h:71:11: warning: 'description' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
  QString description() const { return tr("Read and render surfaces."); }
          ^
/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtgui/extensionplugin.h:67:19: note: overridden virtual function is here
  virtual QString description() const = 0;
                  ^
In file included from /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/surfaces/surfaces.cpp:18:
/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/surfaces/surfacedialog.h:43:54: warning: 'QFlags' is deprecated: Use default constructor instead [-Wdeprecated-declarations]
  SurfaceDialog(QWidget* parent = 0, Qt::WindowFlags f = 0);
                                                     ^
/usr/local/include/qt5/QtCore/qflags.h:123:5: note: 'QFlags' has been explicitly marked deprecated here
    QT_DEPRECATED_X("Use default constructor instead") Q_DECL_CONSTEXPR inline QFlags(Zero) noexcept : i(0) {}
    ^
/usr/local/include/qt5/QtCore/qglobal.h:294:33: note: expanded from macro 'QT_DEPRECATED_X'
#  define QT_DEPRECATED_X(text) Q_DECL_DEPRECATED_X(text)
                                ^
/usr/local/include/qt5/QtCore/qcompilerdetection.h:675:55: note: expanded from macro 'Q_DECL_DEPRECATED_X'
#    define Q_DECL_DEPRECATED_X(text) __attribute__ ((__deprecated__(text)))
                                                      ^
/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/surfaces/surfaces.cpp:450:31: warning: 'grabWindow' is deprecated: Use QScreen::grabWindow() instead [-Wdeprecated-declarations]
    QPixmap pixmap = QPixmap::grabWindow(glWidget->winId());
                              ^
/usr/local/include/qt5/QtGui/qpixmap.h:117:5: note: 'grabWindow' has been explicitly marked deprecated here
    QT_DEPRECATED_X("Use QScreen::grabWindow() instead")
    ^
/usr/local/include/qt5/QtCore/qglobal.h:294:33: note: expanded from macro 'QT_DEPRECATED_X'
#  define QT_DEPRECATED_X(text) Q_DECL_DEPRECATED_X(text)
                                ^
/usr/local/include/qt5/QtCore/qcompilerdetection.h:675:55: note: expanded from macro 'Q_DECL_DEPRECATED_X'
#    define Q_DECL_DEPRECATED_X(text) __attribute__ ((__deprecated__(text)))
                                                      ^
4 warnings generated.
[468/475] /nxb-bin/usr/bin/c++ -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -Iavogadro/qtplugins/surfaces/Surfaces_autogen/include -I. -I/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0 -Iavogadro/core -Iavogadro/io -Iavogadro/quantumio -Iavogadro/rendering -Iavogadro/qtgui -Iavogadro/qtopengl -Iavogadro/molequeue -Iavogadro/qtplugins/surfaces -isystem /usr/local/include/eigen3 -isystem /usr/local/include/qt5 -isystem /usr/local/include/qt5/QtWidgets -isystem /usr/local/include/qt5/QtGui -isystem /usr/local/include/qt5/QtCore -isystem /usr/local/lib/qt5/mkspecs/freebsd-clang -isystem /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/thirdparty/libgwavi -isystem /wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/thirdparty/gif-h -isystem /usr/local/include/qt5/QtConcurrent -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -O2 -p
 ipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -fPIC -std=c++11 -MD -MT avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/SurfacesPlugin.cpp.o -MF avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/SurfacesPlugin.cpp.o.d -o avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/SurfacesPlugin.cpp.o -c avogadro/qtplugins/surfaces/SurfacesPlugin.cpp
In file included from avogadro/qtplugins/surfaces/SurfacesPlugin.cpp:19:
/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/surfaces/surfaces.h:70:11: warning: 'name' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
  QString name() const { return tr("Surfaces"); }
          ^
/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtgui/extensionplugin.h:61:19: note: overridden virtual function is here
  virtual QString name() const = 0;
                  ^
In file included from avogadro/qtplugins/surfaces/SurfacesPlugin.cpp:19:
/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtplugins/surfaces/surfaces.h:71:11: warning: 'description' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
  QString description() const { return tr("Read and render surfaces."); }
          ^
/wrkdirs/usr/ports/science/avogadrolibs/work/avogadrolibs-1.93.0/avogadro/qtgui/extensionplugin.h:67:19: note: overridden virtual function is here
  virtual QString description() const = 0;
                  ^
2 warnings generated.
[469/475] : && /usr/local/bin/cmake -E rm -f lib/avogadro2/staticplugins/Surfaces.a && /nxb-bin/usr/bin/ar qc lib/avogadro2/staticplugins/Surfaces.a  avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/Surfaces_autogen/mocs_compilation.cpp.o avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/gaussiansetconcurrent.cpp.o avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/slatersetconcurrent.cpp.o avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/surfacedialog.cpp.o avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/surfaces.cpp.o avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/SurfacesPlugin.cpp.o && /nxb-bin/usr/bin/ranlib lib/avogadro2/staticplugins/Surfaces.a && :
[470/475] cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins && /usr/local/bin/cmake -E cmake_autogen /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/CMakeFiles/AvogadroQtPlugins_autogen.dir/AutogenInfo.json Release && /usr/local/bin/cmake -E touch /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/AvogadroQtPlugins_autogen/timestamp
FAILED: avogadro/qtplugins/AvogadroQtPlugins_autogen/timestamp 
cd /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins && /usr/local/bin/cmake -E cmake_autogen /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/CMakeFiles/AvogadroQtPlugins_autogen.dir/AutogenInfo.json Release && /usr/local/bin/cmake -E touch /wrkdirs/usr/ports/science/avogadrolibs/work/.build/avogadro/qtplugins/AvogadroQtPlugins_autogen/timestamp
Fatal error 'thread 0xf418e500 exits with resources held!' at line 321 in file /usr/local/poudriere/jails/121armv7/usr/src/lib/libthr/thread/thr_exit.c (errno = 0)
qemu: uncaught target signal 6 (Abort trap) - core dumped
Abort trap
ninja: build stopped: subcommand failed.
*** Error code 1

Stop.
make: stopped in /usr/ports/science/avogadrolibs


More information about the freebsd-pkg-fallout mailing list