[package - head-amd64-default][science/luscus] Failed for luscus-0.8.6_1 in build

pkg-fallout at FreeBSD.org pkg-fallout at FreeBSD.org
Thu Sep 3 06:38:56 UTC 2020


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer:     yuri at FreeBSD.org
Last committer: zeising at FreeBSD.org
Ident:          $FreeBSD: head/science/luscus/Makefile 516988 2019-11-07 17:17:53Z zeising $
Log URL:        http://beefy18.nyi.freebsd.org/data/head-amd64-default/p547401_s365284/logs/luscus-0.8.6_1.log
Build URL:      http://beefy18.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p547401_s365284
Log:

=>> Building science/luscus
build started at Thu Sep  3 06:38:22 UTC 2020
port directory: /usr/ports/science/luscus
package name: luscus-0.8.6_1
building for: FreeBSD head-amd64-default-job-13 13.0-CURRENT FreeBSD 13.0-CURRENT 1300113 amd64
maintained by: yuri at FreeBSD.org
Makefile ident:      $FreeBSD: head/science/luscus/Makefile 516988 2019-11-07 17:17:53Z zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300100
Jail OSVERSION: 1300113
Job Id: 13




!!! Jail is newer than host. (Jail: 1300113, Host: 1300100) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



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=======================<phase: check-sanity   >============================
===>  License AFL accepted by the user
===========================================================================
=======================<phase: pkg-depends    >============================
===>   luscus-0.8.6_1 depends on file: /usr/local/sbin/pkg - not found
===>   Installing existing package /packages/All/pkg-1.14.7.txz
[head-amd64-default-job-13] Installing pkg-1.14.7...
[head-amd64-default-job-13] Extracting pkg-1.14.7: .......... done
===>   luscus-0.8.6_1 depends on file: /usr/local/sbin/pkg - found
===>   Returning to build of luscus-0.8.6_1
===========================================================================
=======================<phase: fetch-depends  >============================
===========================================================================
=======================<phase: fetch          >============================
===>  License AFL accepted by the user
===> Fetching all distfiles required by luscus-0.8.6_1 for building
===========================================================================
=======================<phase: checksum       >============================
===>  License AFL accepted by the user
===> Fetching all distfiles required by luscus-0.8.6_1 for building
=> SHA256 Checksum OK for luscus_0.8.6.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract        >============================
===>  License AFL accepted by the user
===> Fetching all distfiles required by luscus-0.8.6_1 for building
===>  Extracting for luscus-0.8.6_1
=> SHA256 Checksum OK for luscus_0.8.6.tar.gz.
===========================================================================
=======================<phase: patch-depends  >============================
===========================================================================
=======================<phase: patch          >============================
===>  Patching for luscus-0.8.6_1
===>  Applying FreeBSD patches for luscus-0.8.6_1 from /usr/ports/science/luscus/files
===========================================================================
=======================<phase: build-depends  >============================
===>   luscus-0.8.6_1 depends on file: /usr/local/bin/cmake - not found
===>   Installing existing package /packages/All/cmake-3.18.2.txz
[head-amd64-default-job-13] Installing cmake-3.18.2...
[head-amd64-default-job-13] `-- Installing curl-7.72.0...
[head-amd64-default-job-13] |   `-- Installing ca_root_nss-3.56...
[head-amd64-default-job-13] |   `-- Extracting ca_root_nss-3.56: ........ done
[head-amd64-default-job-13] |   `-- Installing libnghttp2-1.41.0...
[head-amd64-default-job-13] |   `-- Extracting libnghttp2-1.41.0: .......... done
[head-amd64-default-job-13] `-- Extracting curl-7.72.0: .......... done
[head-amd64-default-job-13] `-- Installing expat-2.2.8...
<snip>
status found babel; installing babel plugins!
-- Configuring done
-- Generating done
CMake Warning:
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    CMAKE_COLOR_MAKEFILE
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-- Build files have been written to: /wrkdirs/usr/ports/science/luscus/work/.build
===========================================================================
=======================<phase: build          >============================
===>  Building for luscus-0.8.6_1
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[8/40] /usr/bin/cc -DGTK2 -DGTK_GLEXT -DGTK_OLD -DHAVE_STRCASECMP -DHAVE_STRCASESTR -DLINUX -D_GNU_SOURCE -D_THREAD_SAFE -I. -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing   -I/usr/local/include/gtkglext-1.0 -I/usr/local/lib/gtkglext-1.0/include -I/usr/local/include -I/usr/local/include/gtk-2.0 -I/usr/local/include/pango-1.0 -I/usr/local/include/glib-2.0 -I/usr/local/lib/glib-2.0/include -I/usr/local/include/fribidi -I/usr/local/include/cairo -I/usr/local/include/pixman-1 -I/usr/local/include/freetype2 -I/usr/local/include/libdrm -I/usr/local/include/libpng16 -I/usr/local/include/harfbuzz -I/usr/local/include/gdk-pixbuf-2.0 -I/usr/local/include/atk-1.0 -pthread -MD -MT CMakeFiles/luscus.dir/gv_atoms.c.o -MF CMakeFiles/luscus.dir/gv_atoms.c.o.d -o CMakeFiles/luscus.dir/gv_atoms.c.o -c /wrkdirs/usr/ports/science/luscus/work/luscus_0.8.6/gv_atoms.c
[9/40] /usr/bin/cc -DGTK2 -DGTK_GLEXT -DGTK_OLD -DHAVE_STRCASECMP -DHAVE_STRCASESTR -DLINUX -D_GNU_SOURCE -D_THREAD_SAFE -I. -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing   -I/usr/local/include/gtkglext-1.0 -I/usr/local/lib/gtkglext-1.0/include -I/usr/local/include -I/usr/local/include/gtk-2.0 -I/usr/local/include/pango-1.0 -I/usr/local/include/glib-2.0 -I/usr/local/lib/glib-2.0/include -I/usr/local/include/fribidi -I/usr/local/include/cairo -I/usr/local/include/pixman-1 -I/usr/local/include/freetype2 -I/usr/local/include/libdrm -I/usr/local/include/libpng16 -I/usr/local/include/harfbuzz -I/usr/local/include/gdk-pixbuf-2.0 -I/usr/local/include/atk-1.0 -pthread -MD -MT CMakeFiles/luscus.dir/findsym.c.o -MF CMakeFiles/luscus.dir/findsym.c.o.d -o CMakeFiles/luscus.dir/findsym.c.o -c /wrkdirs/usr/ports/science/luscus/work/luscus_0.8.6/findsym.c
[10/40] /usr/bin/cc -DGTK2 -DGTK_GLEXT -DGTK_OLD -DHAVE_STRCASECMP -DHAVE_STRCASESTR -DLINUX -D_GNU_SOURCE -D_THREAD_SAFE -I. -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing   -I/usr/local/include/gtkglext-1.0 -I/usr/local/lib/gtkglext-1.0/include -I/usr/local/include -I/usr/local/include/gtk-2.0 -I/usr/local/include/pango-1.0 -I/usr/local/include/glib-2.0 -I/usr/local/lib/glib-2.0/include -I/usr/local/include/fribidi -I/usr/local/include/cairo -I/usr/local/include/pixman-1 -I/usr/local/include/freetype2 -I/usr/local/include/libdrm -I/usr/local/include/libpng16 -I/usr/local/include/harfbuzz -I/usr/local/include/gdk-pixbuf-2.0 -I/usr/local/include/atk-1.0 -pthread -MD -MT CMakeFiles/luscus.dir/gv_fragments.c.o -MF CMakeFiles/luscus.dir/gv_fragments.c.o.d -o CMakeFiles/luscus.dir/gv_fragments.c.o -c /wrkdirs/usr/ports/science/luscus/work/luscus_0.8.6/gv_fragments.c
[11/40] /usr/bin/cc -DGTK2 -DGTK_GLEXT -DGTK_OLD -DHAVE_STRCASECMP -DHAVE_STRCASESTR -DLINUX -D_GNU_SOURCE -D_THREAD_SAFE -I. -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing   -I/usr/local/include/gtkglext-1.0 -I/usr/local/lib/gtkglext-1.0/include -I/usr/local/include -I/usr/local/include/gtk-2.0 -I/usr/local/include/pango-1.0 -I/usr/local/include/glib-2.0 -I/usr/local/lib/glib-2.0/include -I/usr/local/include/fribidi -I/usr/local/include/cairo -I/usr/local/include/pixman-1 -I/usr/local/include/freetype2 -I/usr/local/include/libdrm -I/usr/local/include/libpng16 -I/usr/local/include/harfbuzz -I/usr/local/include/gdk-pixbuf-2.0 -I/usr/local/include/atk-1.0 -pthread -MD -MT CMakeFiles/luscus.dir/gv_gtk_atom_list.c.o -MF CMakeFiles/luscus.dir/gv_gtk_atom_list.c.o.d -o CMakeFiles/luscus.dir/gv_gtk_atom_list.c.o -c /wrkdirs/usr/ports/science/luscus/work/luscus_0.8.6/gv_gtk_atom_list.c
[12/40] /usr/bin/cc -DGTK2 -DGTK_GLEXT -DGTK_OLD -DHAVE_STRCASECMP -DHAVE_STRCASESTR -DLINUX -D_GNU_SOURCE -D_THREAD_SAFE -I. -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing   -I/usr/local/include/gtkglext-1.0 -I/usr/local/lib/gtkglext-1.0/include -I/usr/local/include -I/usr/local/include/gtk-2.0 -I/usr/local/include/pango-1.0 -I/usr/local/include/glib-2.0 -I/usr/local/lib/glib-2.0/include -I/usr/local/include/fribidi -I/usr/local/include/cairo -I/usr/local/include/pixman-1 -I/usr/local/include/freetype2 -I/usr/local/include/libdrm -I/usr/local/include/libpng16 -I/usr/local/include/harfbuzz -I/usr/local/include/gdk-pixbuf-2.0 -I/usr/local/include/atk-1.0 -pthread -MD -MT CMakeFiles/luscus.dir/gv_geom.c.o -MF CMakeFiles/luscus.dir/gv_geom.c.o.d -o CMakeFiles/luscus.dir/gv_geom.c.o -c /wrkdirs/usr/ports/science/luscus/work/luscus_0.8.6/gv_geom.c
/wrkdirs/usr/ports/science/luscus/work/luscus_0.8.6/gv_geom.c:1552:7: warning: add explicit braces to avoid dangling else [-Wdangling-else]
      else if (m->bond[i].iat1 == atj) m->bond[i].iat1 = ati;
      ^
1 warning generated.
[13/40] /usr/bin/cc -DGTK2 -DGTK_GLEXT -DGTK_OLD -DHAVE_STRCASECMP -DHAVE_STRCASESTR -DLINUX -D_GNU_SOURCE -D_THREAD_SAFE -I. -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing   -I/usr/local/include/gtkglext-1.0 -I/usr/local/lib/gtkglext-1.0/include -I/usr/local/include -I/usr/local/include/gtk-2.0 -I/usr/local/include/pango-1.0 -I/usr/local/include/glib-2.0 -I/usr/local/lib/glib-2.0/include -I/usr/local/include/fribidi -I/usr/local/include/cairo -I/usr/local/include/pixman-1 -I/usr/local/include/freetype2 -I/usr/local/include/libdrm -I/usr/local/include/libpng16 -I/usr/local/include/harfbuzz -I/usr/local/include/gdk-pixbuf-2.0 -I/usr/local/include/atk-1.0 -pthread -MD -MT CMakeFiles/luscus.dir/gv_gtk_multiview.c.o -MF CMakeFiles/luscus.dir/gv_gtk_multiview.c.o.d -o CMakeFiles/luscus.dir/gv_gtk_multiview.c.o -c /wrkdirs/usr/ports/science/luscus/work/luscus_0.8.6/gv_gtk_multiview.c
[14/40] /usr/bin/cc -DGTK2 -DGTK_GLEXT -DGTK_OLD -DHAVE_STRCASECMP -DHAVE_STRCASESTR -DLINUX -D_GNU_SOURCE -D_THREAD_SAFE -I. -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing   -I/usr/local/include/gtkglext-1.0 -I/usr/local/lib/gtkglext-1.0/include -I/usr/local/include -I/usr/local/include/gtk-2.0 -I/usr/local/include/pango-1.0 -I/usr/local/include/glib-2.0 -I/usr/local/lib/glib-2.0/include -I/usr/local/include/fribidi -I/usr/local/include/cairo -I/usr/local/include/pixman-1 -I/usr/local/include/freetype2 -I/usr/local/include/libdrm -I/usr/local/include/libpng16 -I/usr/local/include/harfbuzz -I/usr/local/include/gdk-pixbuf-2.0 -I/usr/local/include/atk-1.0 -pthread -MD -MT CMakeFiles/luscus.dir/mystring.c.o -MF CMakeFiles/luscus.dir/mystring.c.o.d -o CMakeFiles/luscus.dir/mystring.c.o -c /wrkdirs/usr/ports/science/luscus/work/luscus_0.8.6/mystring.c
[15/40] /usr/bin/cc -DGTK2 -DGTK_GLEXT -DGTK_OLD -DHAVE_STRCASECMP -DHAVE_STRCASESTR -DLINUX -D_GNU_SOURCE -D_THREAD_SAFE -I. -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing   -I/usr/local/include/gtkglext-1.0 -I/usr/local/lib/gtkglext-1.0/include -I/usr/local/include -I/usr/local/include/gtk-2.0 -I/usr/local/include/pango-1.0 -I/usr/local/include/glib-2.0 -I/usr/local/lib/glib-2.0/include -I/usr/local/include/fribidi -I/usr/local/include/cairo -I/usr/local/include/pixman-1 -I/usr/local/include/freetype2 -I/usr/local/include/libdrm -I/usr/local/include/libpng16 -I/usr/local/include/harfbuzz -I/usr/local/include/gdk-pixbuf-2.0 -I/usr/local/include/atk-1.0 -pthread -MD -MT CMakeFiles/luscus.dir/screenshot.c.o -MF CMakeFiles/luscus.dir/screenshot.c.o.d -o CMakeFiles/luscus.dir/screenshot.c.o -c /wrkdirs/usr/ports/science/luscus/work/luscus_0.8.6/screenshot.c
[16/40] /usr/bin/cc -DGTK2 -DGTK_GLEXT -DGTK_OLD -DHAVE_STRCASECMP -DHAVE_STRCASESTR -DLINUX -D_GNU_SOURCE -D_THREAD_SAFE -I. -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing   -I/usr/local/include/gtkglext-1.0 -I/usr/local/lib/gtkglext-1.0/include -I/usr/local/include -I/usr/local/include/gtk-2.0 -I/usr/local/include/pango-1.0 -I/usr/local/include/glib-2.0 -I/usr/local/lib/glib-2.0/include -I/usr/local/include/fribidi -I/usr/local/include/cairo -I/usr/local/include/pixman-1 -I/usr/local/include/freetype2 -I/usr/local/include/libdrm -I/usr/local/include/libpng16 -I/usr/local/include/harfbuzz -I/usr/local/include/gdk-pixbuf-2.0 -I/usr/local/include/atk-1.0 -pthread -MD -MT CMakeFiles/luscus.dir/luscus_gtk_util.c.o -MF CMakeFiles/luscus.dir/luscus_gtk_util.c.o.d -o CMakeFiles/luscus.dir/luscus_gtk_util.c.o -c /wrkdirs/usr/ports/science/luscus/work/luscus_0.8.6/luscus_gtk_util.c
/wrkdirs/usr/ports/science/luscus/work/luscus_0.8.6/luscus_gtk_util.c:3477:32: warning: expression result unused [-Wunused-value]
        Input_Data.label_atoms &~ (1 << 5);
        ~~~~~~~~~~~~~~~~~~~~~~ ^~~~~~~~~~~
/wrkdirs/usr/ports/science/luscus/work/luscus_0.8.6/luscus_gtk_util.c:3479:32: warning: expression result unused [-Wunused-value]
        Input_Data.label_atoms &~ (1 << 6);
        ~~~~~~~~~~~~~~~~~~~~~~ ^~~~~~~~~~~
2 warnings generated.
[17/40] /usr/bin/cc -DGTK2 -DGTK_GLEXT -DGTK_OLD -DHAVE_STRCASECMP -DHAVE_STRCASESTR -DLINUX -D_GNU_SOURCE -D_THREAD_SAFE -I. -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing   -I/usr/local/include/gtkglext-1.0 -I/usr/local/lib/gtkglext-1.0/include -I/usr/local/include -I/usr/local/include/gtk-2.0 -I/usr/local/include/pango-1.0 -I/usr/local/include/glib-2.0 -I/usr/local/lib/glib-2.0/include -I/usr/local/include/fribidi -I/usr/local/include/cairo -I/usr/local/include/pixman-1 -I/usr/local/include/freetype2 -I/usr/local/include/libdrm -I/usr/local/include/libpng16 -I/usr/local/include/harfbuzz -I/usr/local/include/gdk-pixbuf-2.0 -I/usr/local/include/atk-1.0 -pthread -MD -MT CMakeFiles/luscus.dir/gvgrp.c.o -MF CMakeFiles/luscus.dir/gvgrp.c.o.d -o CMakeFiles/luscus.dir/gvgrp.c.o -c /wrkdirs/usr/ports/science/luscus/work/luscus_0.8.6/gvgrp.c
[18/40] /usr/bin/cc -DGTK2 -DGTK_GLEXT -DGTK_OLD -DHAVE_STRCASECMP -DHAVE_STRCASESTR -DLINUX -D_GNU_SOURCE -D_THREAD_SAFE -I. -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing   -I/usr/local/include/gtkglext-1.0 -I/usr/local/lib/gtkglext-1.0/include -I/usr/local/include -I/usr/local/include/gtk-2.0 -I/usr/local/include/pango-1.0 -I/usr/local/include/glib-2.0 -I/usr/local/lib/glib-2.0/include -I/usr/local/include/fribidi -I/usr/local/include/cairo -I/usr/local/include/pixman-1 -I/usr/local/include/freetype2 -I/usr/local/include/libdrm -I/usr/local/include/libpng16 -I/usr/local/include/harfbuzz -I/usr/local/include/gdk-pixbuf-2.0 -I/usr/local/include/atk-1.0 -pthread -MD -MT CMakeFiles/luscus.dir/gveps.c.o -MF CMakeFiles/luscus.dir/gveps.c.o.d -o CMakeFiles/luscus.dir/gveps.c.o -c /wrkdirs/usr/ports/science/luscus/work/luscus_0.8.6/gveps.c
[19/40] /usr/bin/cc -DGTK2 -DGTK_GLEXT -DGTK_OLD -DHAVE_STRCASECMP -DHAVE_STRCASESTR -DLINUX -D_GNU_SOURCE -D_THREAD_SAFE -I. -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing   -I/usr/local/include/gtkglext-1.0 -I/usr/local/lib/gtkglext-1.0/include -I/usr/local/include -I/usr/local/include/gtk-2.0 -I/usr/local/include/pango-1.0 -I/usr/local/include/glib-2.0 -I/usr/local/lib/glib-2.0/include -I/usr/local/include/fribidi -I/usr/local/include/cairo -I/usr/local/include/pixman-1 -I/usr/local/include/freetype2 -I/usr/local/include/libdrm -I/usr/local/include/libpng16 -I/usr/local/include/harfbuzz -I/usr/local/include/gdk-pixbuf-2.0 -I/usr/local/include/atk-1.0 -pthread -MD -MT CMakeFiles/luscus.dir/gv_gtk_help.c.o -MF CMakeFiles/luscus.dir/gv_gtk_help.c.o.d -o CMakeFiles/luscus.dir/gv_gtk_help.c.o -c /wrkdirs/usr/ports/science/luscus/work/luscus_0.8.6/gv_gtk_help.c
[20/40] /usr/bin/cc -DGTK2 -DGTK_GLEXT -DGTK_OLD -DHAVE_STRCASECMP -DHAVE_STRCASESTR -DLINUX -D_GNU_SOURCE -D_THREAD_SAFE -I. -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing   -I/usr/local/include/gtkglext-1.0 -I/usr/local/lib/gtkglext-1.0/include -I/usr/local/include -I/usr/local/include/gtk-2.0 -I/usr/local/include/pango-1.0 -I/usr/local/include/glib-2.0 -I/usr/local/lib/glib-2.0/include -I/usr/local/include/fribidi -I/usr/local/include/cairo -I/usr/local/include/pixman-1 -I/usr/local/include/freetype2 -I/usr/local/include/libdrm -I/usr/local/include/libpng16 -I/usr/local/include/harfbuzz -I/usr/local/include/gdk-pixbuf-2.0 -I/usr/local/include/atk-1.0 -pthread -MD -MT CMakeFiles/luscus.dir/gv_gtk_xyz_editor.c.o -MF CMakeFiles/luscus.dir/gv_gtk_xyz_editor.c.o.d -o CMakeFiles/luscus.dir/gv_gtk_xyz_editor.c.o -c /wrkdirs/usr/ports/science/luscus/work/luscus_0.8.6/gv_gtk_xyz_editor.c
[21/40] /usr/bin/cc -DGTK2 -DGTK_GLEXT -DGTK_OLD -DHAVE_STRCASECMP -DHAVE_STRCASESTR -DLINUX -D_GNU_SOURCE -D_THREAD_SAFE -I. -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing   -I/usr/local/include/gtkglext-1.0 -I/usr/local/lib/gtkglext-1.0/include -I/usr/local/include -I/usr/local/include/gtk-2.0 -I/usr/local/include/pango-1.0 -I/usr/local/include/glib-2.0 -I/usr/local/lib/glib-2.0/include -I/usr/local/include/fribidi -I/usr/local/include/cairo -I/usr/local/include/pixman-1 -I/usr/local/include/freetype2 -I/usr/local/include/libdrm -I/usr/local/include/libpng16 -I/usr/local/include/harfbuzz -I/usr/local/include/gdk-pixbuf-2.0 -I/usr/local/include/atk-1.0 -pthread -MD -MT CMakeFiles/luscus.dir/pixeldata.c.o -MF CMakeFiles/luscus.dir/pixeldata.c.o.d -o CMakeFiles/luscus.dir/pixeldata.c.o -c /wrkdirs/usr/ports/science/luscus/work/luscus_0.8.6/pixeldata.c
[22/40] /usr/bin/cc -DGTK2 -DGTK_GLEXT -DGTK_OLD -DHAVE_STRCASECMP -DHAVE_STRCASESTR -DLINUX -D_GNU_SOURCE -D_THREAD_SAFE -I. -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing   -I/usr/local/include/gtkglext-1.0 -I/usr/local/lib/gtkglext-1.0/include -I/usr/local/include -I/usr/local/include/gtk-2.0 -I/usr/local/include/pango-1.0 -I/usr/local/include/glib-2.0 -I/usr/local/lib/glib-2.0/include -I/usr/local/include/fribidi -I/usr/local/include/cairo -I/usr/local/include/pixman-1 -I/usr/local/include/freetype2 -I/usr/local/include/libdrm -I/usr/local/include/libpng16 -I/usr/local/include/harfbuzz -I/usr/local/include/gdk-pixbuf-2.0 -I/usr/local/include/atk-1.0 -pthread -MD -MT CMakeFiles/luscus.dir/write_file.c.o -MF CMakeFiles/luscus.dir/write_file.c.o.d -o CMakeFiles/luscus.dir/write_file.c.o -c /wrkdirs/usr/ports/science/luscus/work/luscus_0.8.6/write_file.c
[23/40] /usr/bin/cc -DGTK2 -DGTK_GLEXT -DGTK_OLD -DHAVE_STRCASECMP -DHAVE_STRCASESTR -DLINUX -D_GNU_SOURCE -D_THREAD_SAFE -I. -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing   -I/usr/local/include/gtkglext-1.0 -I/usr/local/lib/gtkglext-1.0/include -I/usr/local/include -I/usr/local/include/gtk-2.0 -I/usr/local/include/pango-1.0 -I/usr/local/include/glib-2.0 -I/usr/local/lib/glib-2.0/include -I/usr/local/include/fribidi -I/usr/local/include/cairo -I/usr/local/include/pixman-1 -I/usr/local/include/freetype2 -I/usr/local/include/libdrm -I/usr/local/include/libpng16 -I/usr/local/include/harfbuzz -I/usr/local/include/gdk-pixbuf-2.0 -I/usr/local/include/atk-1.0 -pthread -MD -MT CMakeFiles/luscus.dir/surface.c.o -MF CMakeFiles/luscus.dir/surface.c.o.d -o CMakeFiles/luscus.dir/surface.c.o -c /wrkdirs/usr/ports/science/luscus/work/luscus_0.8.6/surface.c
[24/40] /usr/bin/cc -DGTK2 -DGTK_GLEXT -DGTK_OLD -DHAVE_STRCASECMP -DHAVE_STRCASESTR -DLINUX -D_GNU_SOURCE -D_THREAD_SAFE -I. -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing   -I/usr/local/include/gtkglext-1.0 -I/usr/local/lib/gtkglext-1.0/include -I/usr/local/include -I/usr/local/include/gtk-2.0 -I/usr/local/include/pango-1.0 -I/usr/local/include/glib-2.0 -I/usr/local/lib/glib-2.0/include -I/usr/local/include/fribidi -I/usr/local/include/cairo -I/usr/local/include/pixman-1 -I/usr/local/include/freetype2 -I/usr/local/include/libdrm -I/usr/local/include/libpng16 -I/usr/local/include/harfbuzz -I/usr/local/include/gdk-pixbuf-2.0 -I/usr/local/include/atk-1.0 -pthread -MD -MT CMakeFiles/luscus.dir/gv_gtk_make_graph.c.o -MF CMakeFiles/luscus.dir/gv_gtk_make_graph.c.o.d -o CMakeFiles/luscus.dir/gv_gtk_make_graph.c.o -c /wrkdirs/usr/ports/science/luscus/work/luscus_0.8.6/gv_gtk_make_graph.c
[25/40] /usr/bin/cc -DGTK2 -DGTK_GLEXT -DGTK_OLD -DHAVE_STRCASECMP -DHAVE_STRCASESTR -DLINUX -D_GNU_SOURCE -D_THREAD_SAFE -I. -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing   -I/usr/local/include/gtkglext-1.0 -I/usr/local/lib/gtkglext-1.0/include -I/usr/local/include -I/usr/local/include/gtk-2.0 -I/usr/local/include/pango-1.0 -I/usr/local/include/glib-2.0 -I/usr/local/lib/glib-2.0/include -I/usr/local/include/fribidi -I/usr/local/include/cairo -I/usr/local/include/pixman-1 -I/usr/local/include/freetype2 -I/usr/local/include/libdrm -I/usr/local/include/libpng16 -I/usr/local/include/harfbuzz -I/usr/local/include/gdk-pixbuf-2.0 -I/usr/local/include/atk-1.0 -pthread -MD -MT CMakeFiles/luscus.dir/read_file.c.o -MF CMakeFiles/luscus.dir/read_file.c.o.d -o CMakeFiles/luscus.dir/read_file.c.o -c /wrkdirs/usr/ports/science/luscus/work/luscus_0.8.6/read_file.c
/wrkdirs/usr/ports/science/luscus/work/luscus_0.8.6/read_file.c:1426:7: warning: add explicit braces to avoid dangling else [-Wdangling-else]
      else if (mp->bond[i].bond_type == DOUBLE_BOND) ibond+=2;
      ^
/wrkdirs/usr/ports/science/luscus/work/luscus_0.8.6/read_file.c:2879:7: warning: expression result unused [-Wunused-value]
      *(dest++);
      ^~~~~~~~~
2 warnings generated.
[26/40] /usr/bin/cc -DGTK2 -DGTK_GLEXT -DGTK_OLD -DHAVE_STRCASECMP -DHAVE_STRCASESTR -DLINUX -D_GNU_SOURCE -D_THREAD_SAFE -I. -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing   -I/usr/local/include/gtkglext-1.0 -I/usr/local/lib/gtkglext-1.0/include -I/usr/local/include -I/usr/local/include/gtk-2.0 -I/usr/local/include/pango-1.0 -I/usr/local/include/glib-2.0 -I/usr/local/lib/glib-2.0/include -I/usr/local/include/fribidi -I/usr/local/include/cairo -I/usr/local/include/pixman-1 -I/usr/local/include/freetype2 -I/usr/local/include/libdrm -I/usr/local/include/libpng16 -I/usr/local/include/harfbuzz -I/usr/local/include/gdk-pixbuf-2.0 -I/usr/local/include/atk-1.0 -pthread -MD -MT CMakeFiles/luscus.dir/luscus_gtk_handle.c.o -MF CMakeFiles/luscus.dir/luscus_gtk_handle.c.o.d -o CMakeFiles/luscus.dir/luscus_gtk_handle.c.o -c /wrkdirs/usr/ports/science/luscus/work/luscus_0.8.6/luscus_gtk_handle.c
[27/40] /usr/bin/cc -DGTK2 -DGTK_GLEXT -DGTK_OLD -DHAVE_STRCASECMP -DHAVE_STRCASESTR -DLINUX -D_GNU_SOURCE -D_THREAD_SAFE -I. -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing   -I/usr/local/include/gtkglext-1.0 -I/usr/local/lib/gtkglext-1.0/include -I/usr/local/include -I/usr/local/include/gtk-2.0 -I/usr/local/include/pango-1.0 -I/usr/local/include/glib-2.0 -I/usr/local/lib/glib-2.0/include -I/usr/local/include/fribidi -I/usr/local/include/cairo -I/usr/local/include/pixman-1 -I/usr/local/include/freetype2 -I/usr/local/include/libdrm -I/usr/local/include/libpng16 -I/usr/local/include/harfbuzz -I/usr/local/include/gdk-pixbuf-2.0 -I/usr/local/include/atk-1.0 -pthread -MD -MT CMakeFiles/luscus.dir/mcube.c.o -MF CMakeFiles/luscus.dir/mcube.c.o.d -o CMakeFiles/luscus.dir/mcube.c.o -c /wrkdirs/usr/ports/science/luscus/work/luscus_0.8.6/mcube.c
[28/40] /usr/bin/cc -DGTK2 -DGTK_GLEXT -DGTK_OLD -DHAVE_STRCASECMP -DHAVE_STRCASESTR -DLINUX -D_GNU_SOURCE -D_THREAD_SAFE -I. -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing   -I/usr/local/include/gtkglext-1.0 -I/usr/local/lib/gtkglext-1.0/include -I/usr/local/include -I/usr/local/include/gtk-2.0 -I/usr/local/include/pango-1.0 -I/usr/local/include/glib-2.0 -I/usr/local/lib/glib-2.0/include -I/usr/local/include/fribidi -I/usr/local/include/cairo -I/usr/local/include/pixman-1 -I/usr/local/include/freetype2 -I/usr/local/include/libdrm -I/usr/local/include/libpng16 -I/usr/local/include/harfbuzz -I/usr/local/include/gdk-pixbuf-2.0 -I/usr/local/include/atk-1.0 -pthread -MD -MT CMakeFiles/luscus.dir/vstring.c.o -MF CMakeFiles/luscus.dir/vstring.c.o.d -o CMakeFiles/luscus.dir/vstring.c.o -c /wrkdirs/usr/ports/science/luscus/work/luscus_0.8.6/vstring.c
[29/40] : && /usr/bin/cc -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing -fstack-protector-strong CMakeFiles/luscus.dir/main.c.o CMakeFiles/luscus.dir/gtk_gui.c.o CMakeFiles/luscus.dir/gv_menubar.c.o CMakeFiles/luscus.dir/gv_system.c.o CMakeFiles/luscus.dir/gv_notebook.c.o CMakeFiles/luscus.dir/backup_file.c.o CMakeFiles/luscus.dir/findsym.c.o CMakeFiles/luscus.dir/gv_about.c.o CMakeFiles/luscus.dir/gv_atoms.c.o CMakeFiles/luscus.dir/gv_geom.c.o CMakeFiles/luscus.dir/gv_fragments.c.o CMakeFiles/luscus.dir/gv_gtk_atom_list.c.o CMakeFiles/luscus.dir/gv_gtk_multiview.c.o CMakeFiles/luscus.dir/luscus_gtk_util.c.o CMakeFiles/luscus.dir/mystring.c.o CMakeFiles/luscus.dir/screenshot.c.o CMakeFiles/luscus.dir/gveps.c.o CMakeFiles/luscus.dir/gvgrp.c.o CMakeFiles/luscus.dir/gv_gtk_help.c.o CMakeFiles/luscus.dir/gv_gtk_xyz_editor.c.o CMakeFiles/luscus.dir/pixeldata.c.o CMakeFiles/luscus.dir/write_file.c.o CMakeFiles/luscus.dir/re
 ad_file.c.o CMakeFiles/luscus.dir/surface.c.o CMakeFiles/luscus.dir/gv_gtk_make_graph.c.o CMakeFiles/luscus.dir/luscus_gtk_handle.c.o CMakeFiles/luscus.dir/mcube.c.o CMakeFiles/luscus.dir/vstring.c.o -o luscus  -L/usr/local/lib  -lgtkglext-x11-1.0  -lgdkglext-x11-1.0  -lGLU  -lGL  -lpangox-1.0  -lX11  -Wl,--export-dynamic  -lgmodule-2.0  -pthread  -lglib-2.0  -lgtk-x11-2.0  -lgdk-x11-2.0  -lpangocairo-1.0  -latk-1.0  -lcairo  -lpthread  -lgdk_pixbuf-2.0  -lgio-2.0  -lpangoft2-1.0  -lpango-1.0  -lgobject-2.0  -lglib-2.0  -lintl  -lfontconfig  -lfreetype  -lm  -lgtk-x11-2.0  -lgdk-x11-2.0  -lpangocairo-1.0  -latk-1.0  -lcairo  -lpthread  -lgdk_pixbuf-2.0  -lgio-2.0  -lpangoft2-1.0  -lpango-1.0  -lgobject-2.0  -lintl  -lfontconfig  -lfreetype  -lm && :
FAILED: luscus 
: && /usr/bin/cc -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing -fstack-protector-strong CMakeFiles/luscus.dir/main.c.o CMakeFiles/luscus.dir/gtk_gui.c.o CMakeFiles/luscus.dir/gv_menubar.c.o CMakeFiles/luscus.dir/gv_system.c.o CMakeFiles/luscus.dir/gv_notebook.c.o CMakeFiles/luscus.dir/backup_file.c.o CMakeFiles/luscus.dir/findsym.c.o CMakeFiles/luscus.dir/gv_about.c.o CMakeFiles/luscus.dir/gv_atoms.c.o CMakeFiles/luscus.dir/gv_geom.c.o CMakeFiles/luscus.dir/gv_fragments.c.o CMakeFiles/luscus.dir/gv_gtk_atom_list.c.o CMakeFiles/luscus.dir/gv_gtk_multiview.c.o CMakeFiles/luscus.dir/luscus_gtk_util.c.o CMakeFiles/luscus.dir/mystring.c.o CMakeFiles/luscus.dir/screenshot.c.o CMakeFiles/luscus.dir/gveps.c.o CMakeFiles/luscus.dir/gvgrp.c.o CMakeFiles/luscus.dir/gv_gtk_help.c.o CMakeFiles/luscus.dir/gv_gtk_xyz_editor.c.o CMakeFiles/luscus.dir/pixeldata.c.o CMakeFiles/luscus.dir/write_file.c.o CMakeFiles/luscus.dir/read_file.
 c.o CMakeFiles/luscus.dir/surface.c.o CMakeFiles/luscus.dir/gv_gtk_make_graph.c.o CMakeFiles/luscus.dir/luscus_gtk_handle.c.o CMakeFiles/luscus.dir/mcube.c.o CMakeFiles/luscus.dir/vstring.c.o -o luscus  -L/usr/local/lib  -lgtkglext-x11-1.0  -lgdkglext-x11-1.0  -lGLU  -lGL  -lpangox-1.0  -lX11  -Wl,--export-dynamic  -lgmodule-2.0  -pthread  -lglib-2.0  -lgtk-x11-2.0  -lgdk-x11-2.0  -lpangocairo-1.0  -latk-1.0  -lcairo  -lpthread  -lgdk_pixbuf-2.0  -lgio-2.0  -lpangoft2-1.0  -lpango-1.0  -lgobject-2.0  -lglib-2.0  -lintl  -lfontconfig  -lfreetype  -lm  -lgtk-x11-2.0  -lgdk-x11-2.0  -lpangocairo-1.0  -latk-1.0  -lcairo  -lpthread  -lgdk_pixbuf-2.0  -lgio-2.0  -lpangoft2-1.0  -lpango-1.0  -lgobject-2.0  -lintl  -lfontconfig  -lfreetype  -lm && :
ld: error: duplicate symbol: accept_keys
>>> defined at main.c
>>>            CMakeFiles/luscus.dir/main.c.o:(accept_keys)
>>> defined at gtk_gui.c
>>>            CMakeFiles/luscus.dir/gtk_gui.c.o:(.bss+0x318)

ld: error: duplicate symbol: geo_file_position
>>> defined at main.c
>>>            CMakeFiles/luscus.dir/main.c.o:(geo_file_position)
>>> defined at gtk_gui.c
>>>            CMakeFiles/luscus.dir/gtk_gui.c.o:(.bss+0x310)

ld: error: duplicate symbol: igeo
>>> defined at main.c
>>>            CMakeFiles/luscus.dir/main.c.o:(igeo)
>>> defined at gtk_gui.c
>>>            CMakeFiles/luscus.dir/gtk_gui.c.o:(.bss+0x120)

ld: error: duplicate symbol: iorb
>>> defined at main.c
>>>            CMakeFiles/luscus.dir/main.c.o:(iorb)
>>> defined at gtk_gui.c
>>>            CMakeFiles/luscus.dir/gtk_gui.c.o:(.bss+0x2B0)

ld: error: duplicate symbol: ivib
>>> defined at main.c
>>>            CMakeFiles/luscus.dir/main.c.o:(ivib)
>>> defined at gtk_gui.c
>>>            CMakeFiles/luscus.dir/gtk_gui.c.o:(.bss+0x2D4)

ld: error: duplicate symbol: move_camera
>>> defined at main.c
>>>            CMakeFiles/luscus.dir/main.c.o:(move_camera)
>>> defined at gtk_gui.c
>>>            CMakeFiles/luscus.dir/gtk_gui.c.o:(.bss+0x2D0)

ld: error: duplicate symbol: move_molecule
>>> defined at main.c
>>>            CMakeFiles/luscus.dir/main.c.o:(move_molecule)
>>> defined at gtk_gui.c
>>>            CMakeFiles/luscus.dir/gtk_gui.c.o:(.bss+0x320)

ld: error: duplicate symbol: n_geometries
>>> defined at main.c
>>>            CMakeFiles/luscus.dir/main.c.o:(n_geometries)
>>> defined at gtk_gui.c
>>>            CMakeFiles/luscus.dir/gtk_gui.c.o:(.bss+0x11C)

ld: error: duplicate symbol: accept_keys
>>> defined at main.c
>>>            CMakeFiles/luscus.dir/main.c.o:(accept_keys)
>>> defined at gv_menubar.c
>>>            CMakeFiles/luscus.dir/gv_menubar.c.o:(.bss+0x64)

ld: error: duplicate symbol: atom_list
>>> defined at gtk_gui.c
>>>            CMakeFiles/luscus.dir/gtk_gui.c.o:(atom_list)
>>> defined at gv_menubar.c
>>>            CMakeFiles/luscus.dir/gv_menubar.c.o:(.bss+0xA0)

ld: error: duplicate symbol: drawingarea
>>> defined at gtk_gui.c
>>>            CMakeFiles/luscus.dir/gtk_gui.c.o:(drawingarea)
>>> defined at gv_menubar.c
>>>            CMakeFiles/luscus.dir/gv_menubar.c.o:(.bss+0x90)

ld: error: duplicate symbol: geo_file_position
>>> defined at main.c
>>>            CMakeFiles/luscus.dir/main.c.o:(geo_file_position)
>>> defined at gv_menubar.c
>>>            CMakeFiles/luscus.dir/gv_menubar.c.o:(.bss+0x50)

ld: error: duplicate symbol: igeo
>>> defined at main.c
>>>            CMakeFiles/luscus.dir/main.c.o:(igeo)
>>> defined at gv_menubar.c
>>>            CMakeFiles/luscus.dir/gv_menubar.c.o:(.bss+0x58)

ld: error: duplicate symbol: iorb
>>> defined at main.c
>>>            CMakeFiles/luscus.dir/main.c.o:(iorb)
>>> defined at gv_menubar.c
>>>            CMakeFiles/luscus.dir/gv_menubar.c.o:(.bss+0x60)

ld: error: duplicate symbol: ivib
>>> defined at main.c
>>>            CMakeFiles/luscus.dir/main.c.o:(ivib)
>>> defined at gv_menubar.c
>>>            CMakeFiles/luscus.dir/gv_menubar.c.o:(.bss+0x5C)

ld: error: duplicate symbol: move_camera
>>> defined at main.c
>>>            CMakeFiles/luscus.dir/main.c.o:(move_camera)
>>> defined at gv_menubar.c
>>>            CMakeFiles/luscus.dir/gv_menubar.c.o:(.bss+0x68)

ld: error: duplicate symbol: move_molecule
>>> defined at main.c
>>>            CMakeFiles/luscus.dir/main.c.o:(move_molecule)
>>> defined at gv_menubar.c
>>>            CMakeFiles/luscus.dir/gv_menubar.c.o:(.bss+0x70)

ld: error: duplicate symbol: n_geometries
>>> defined at main.c
>>>            CMakeFiles/luscus.dir/main.c.o:(n_geometries)
>>> defined at gv_menubar.c
>>>            CMakeFiles/luscus.dir/gv_menubar.c.o:(.bss+0x48)

ld: error: duplicate symbol: pix
>>> defined at gtk_gui.c
>>>            CMakeFiles/luscus.dir/gtk_gui.c.o:(pix)
>>> defined at gv_menubar.c
>>>            CMakeFiles/luscus.dir/gv_menubar.c.o:(.bss+0x98)

ld: error: duplicate symbol: window
>>> defined at gtk_gui.c
>>>            CMakeFiles/luscus.dir/gtk_gui.c.o:(window)
>>> defined at gv_menubar.c
>>>            CMakeFiles/luscus.dir/gv_menubar.c.o:(.bss+0x88)

ld: error: too many errors emitted, stopping now (use -error-limit=0 to see all errors)
cc: error: linker command failed with exit code 1 (use -v to see invocation)
[30/40] /usr/bin/cc -DGTK2 -DGTK_GLEXT -DGTK_OLD -DHAVE_STRCASECMP -DHAVE_STRCASESTR -DLINUX -D_GNU_SOURCE -D_THREAD_SAFE -I. -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing   -I/usr/local/include/gtkglext-1.0 -I/usr/local/lib/gtkglext-1.0/include -I/usr/local/include -I/usr/local/include/gtk-2.0 -I/usr/local/include/pango-1.0 -I/usr/local/include/glib-2.0 -I/usr/local/lib/glib-2.0/include -I/usr/local/include/fribidi -I/usr/local/include/cairo -I/usr/local/include/pixman-1 -I/usr/local/include/freetype2 -I/usr/local/include/libdrm -I/usr/local/include/libpng16 -I/usr/local/include/harfbuzz -I/usr/local/include/gdk-pixbuf-2.0 -I/usr/local/include/atk-1.0 -pthread -MD -MT plugins/gamess/CMakeFiles/gamess2lus.exe.dir/gamess2lus.c.o -MF plugins/gamess/CMakeFiles/gamess2lus.exe.dir/gamess2lus.c.o.d -o plugins/gamess/CMakeFiles/gamess2lus.exe.dir/gamess2lus.c.o -c /wrkdirs/usr/ports/science/luscus/work/luscus_0.8.6/plugins/
 gamess/gamess2lus.c
ninja: build stopped: subcommand failed.
===> Compilation failed unexpectedly.
Try to set MAKE_JOBS_UNSAFE=yes and rebuild before reporting the failure to
the maintainer.
*** Error code 1

Stop.
make: stopped in /usr/ports/science/luscus


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