[package - head-armv6-default][science/apbs] Failed for apbs-1.5.102 in build
pkg-fallout at FreeBSD.org
pkg-fallout at FreeBSD.org
Thu Aug 27 05:23:18 UTC 2020
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.
Maintainer: yuri at FreeBSD.org
Last committer: yuri at FreeBSD.org
Ident: $FreeBSD: head/science/apbs/Makefile 500699 2019-05-03 06:15:44Z yuri $
Log URL: http://beefy8.nyi.freebsd.org/data/head-armv6-default/p546132_s364744/logs/apbs-1.5.102.log
Build URL: http://beefy8.nyi.freebsd.org/build.html?mastername=head-armv6-default&build=p546132_s364744
Log:
=>> Building science/apbs
build started at Thu Aug 27 05:21:45 UTC 2020
port directory: /usr/ports/science/apbs
package name: apbs-1.5.102
building for: FreeBSD head-armv6-default-job-03 13.0-CURRENT FreeBSD 13.0-CURRENT 1300111 arm
maintained by: yuri at FreeBSD.org
Makefile ident: $FreeBSD: head/science/apbs/Makefile 500699 2019-05-03 06:15:44Z yuri $
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=======================<phase: check-sanity >============================
===> License MIT accepted by the user
===========================================================================
=======================<phase: pkg-depends >============================
===> apbs-1.5.102 depends on file: /usr/local/sbin/pkg - not found
===> Installing existing package /packages/All/pkg-1.14.7.txz
[head-armv6-default-job-03] Installing pkg-1.14.7...
[head-armv6-default-job-03] Extracting pkg-1.14.7: .......... done
===> apbs-1.5.102 depends on file: /usr/local/sbin/pkg - found
===> Returning to build of apbs-1.5.102
===========================================================================
=======================<phase: fetch-depends >============================
===========================================================================
=======================<phase: fetch >============================
===> License MIT accepted by the user
===> Fetching all distfiles required by apbs-1.5.102 for building
===========================================================================
=======================<phase: checksum >============================
===> License MIT accepted by the user
===> Fetching all distfiles required by apbs-1.5.102 for building
=> SHA256 Checksum OK for Electrostatics-apbs-pdb2pqr-apbs-1.5-102-g500c1473_GH0.tar.gz.
<snip>
[36/102] /nxb-bin/usr/bin/cc -Dapbs_generic_EXPORTS -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/base -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/vsys -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/vsh -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/psh -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/src -Isrc -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -g -DNDEBUG -fPIC -MD -MT src/generic/CMakeFiles/apbs_generic.dir/vacc.c.o -MF src/generic/CMakeFiles/apbs_generic.dir/vacc.c.o.d -o src/generic/CMakeFiles/apbs_generic.dir/vacc.c.o -c /wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/src/ge
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[40/102] /nxb-bin/usr/bin/cc -Dmaloc_EXPORTS -I/usr/local/include -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/base -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/psh -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/vsh -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/vsys -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -g -DNDEBUG -fPIC -MD -MT externals/fetk/maloc/src/CMakeFiles/maloc.dir/vsh/vpars.c.o -MF externals/fetk/maloc/src/CMakeFiles/maloc.dir/vsh/vpars.c.o.d -o externals/fetk/maloc/src/CMakeFiles/maloc.dir/vsh/vpars.c.o -c /wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/vsh/vpa
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[42/102] /nxb-bin/usr/bin/cc -Dmaloc_EXPORTS -I/usr/local/include -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/base -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/psh -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/vsh -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/vsys -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -g -DNDEBUG -fPIC -MD -MT externals/fetk/maloc/src/CMakeFiles/maloc.dir/vsh/vsh.c.o -MF externals/fetk/maloc/src/CMakeFiles/maloc.dir/vsh/vsh.c.o.d -o externals/fetk/maloc/src/CMakeFiles/maloc.dir/vsh/vsh.c.o -c /wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/vsh/vsh.c
[43/102] /nxb-bin/usr/bin/cc -Dmaloc_EXPORTS -I/usr/local/include -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/base -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/psh -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/vsh -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/vsys -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -g -DNDEBUG -fPIC -MD -MT externals/fetk/maloc/src/CMakeFiles/maloc.dir/vsh/vyacc.c.o -MF externals/fetk/maloc/src/CMakeFiles/maloc.dir/vsh/vyacc.c.o.d -o externals/fetk/maloc/src/CMakeFiles/maloc.dir/vsh/vyacc.c.o -c /wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/vsh/vya
cc.c
[44/102] /nxb-bin/usr/bin/cc -Dmaloc_EXPORTS -I/usr/local/include -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/base -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/psh -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/vsh -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/vsys -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -g -DNDEBUG -fPIC -MD -MT externals/fetk/maloc/src/CMakeFiles/maloc.dir/vsys/vio.c.o -MF externals/fetk/maloc/src/CMakeFiles/maloc.dir/vsys/vio.c.o.d -o externals/fetk/maloc/src/CMakeFiles/maloc.dir/vsys/vio.c.o -c /wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/vsys/vio.c
[45/102] /nxb-bin/usr/bin/cc -Dmaloc_EXPORTS -I/usr/local/include -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/base -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/psh -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/vsh -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/vsys -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -g -DNDEBUG -fPIC -MD -MT externals/fetk/maloc/src/CMakeFiles/maloc.dir/vsys/viofb.c.o -MF externals/fetk/maloc/src/CMakeFiles/maloc.dir/vsys/viofb.c.o.d -o externals/fetk/maloc/src/CMakeFiles/maloc.dir/vsys/viofb.c.o -c /wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/vsys
/viofb.c
[46/102] /nxb-bin/usr/bin/cc -Dmaloc_EXPORTS -I/usr/local/include -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/base -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/psh -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/vsh -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/vsys -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -g -DNDEBUG -fPIC -MD -MT externals/fetk/maloc/src/CMakeFiles/maloc.dir/vsys/vmem.c.o -MF externals/fetk/maloc/src/CMakeFiles/maloc.dir/vsys/vmem.c.o.d -o externals/fetk/maloc/src/CMakeFiles/maloc.dir/vsys/vmem.c.o -c /wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/vsys/vm
em.c
/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/vsys/vmem.c:179:9: warning: format specifies type 'long' but the argument has type 'unsigned int' [-Wformat]
(vmemTotal.mallocBytes-vmemTotal.freeBytes),
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/vsys/vmem.c:180:9: warning: format specifies type 'long' but the argument has type 'size_t' (aka 'unsigned int') [-Wformat]
vmemTotal.mallocAreas, vmemTotal.mallocBytes,
^~~~~~~~~~~~~~~~~~~~~
/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/vsys/vmem.c:180:32: warning: format specifies type 'long' but the argument has type 'size_t' (aka 'unsigned int') [-Wformat]
vmemTotal.mallocAreas, vmemTotal.mallocBytes,
^~~~~~~~~~~~~~~~~~~~~
/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/vsys/vmem.c:181:9: warning: format specifies type 'long' but the argument has type 'size_t' (aka 'unsigned int') [-Wformat]
vmemTotal.freeBytes, vmemTotal.highWater,
^~~~~~~~~~~~~~~~~~~
/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/vsys/vmem.c:181:30: warning: format specifies type 'long' but the argument has type 'size_t' (aka 'unsigned int') [-Wformat]
vmemTotal.freeBytes, vmemTotal.highWater,
^~~~~~~~~~~~~~~~~~~
/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/vsys/vmem.c:445:13: warning: format specifies type 'long' but the argument has type 'unsigned int' [-Wformat]
(thee->mallocBytes-thee->freeBytes),
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/vsys/vmem.c:446:13: warning: format specifies type 'long' but the argument has type 'size_t' (aka 'unsigned int') [-Wformat]
thee->mallocAreas, thee->mallocBytes,
^~~~~~~~~~~~~~~~~
/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/vsys/vmem.c:446:32: warning: format specifies type 'long' but the argument has type 'size_t' (aka 'unsigned int') [-Wformat]
thee->mallocAreas, thee->mallocBytes,
^~~~~~~~~~~~~~~~~
/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/vsys/vmem.c:447:13: warning: format specifies type 'long' but the argument has type 'size_t' (aka 'unsigned int') [-Wformat]
thee->freeBytes, thee->highWater,
^~~~~~~~~~~~~~~
/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/vsys/vmem.c:447:30: warning: format specifies type 'long' but the argument has type 'size_t' (aka 'unsigned int') [-Wformat]
thee->freeBytes, thee->highWater,
^~~~~~~~~~~~~~~
/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/vsys/vmem.c:451:13: warning: format specifies type 'long' but the argument has type 'unsigned int' [-Wformat]
(vmemMisc.mallocBytes-vmemMisc.freeBytes),
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/vsys/vmem.c:452:13: warning: format specifies type 'long' but the argument has type 'size_t' (aka 'unsigned int') [-Wformat]
vmemMisc.mallocAreas, vmemMisc.mallocBytes,
^~~~~~~~~~~~~~~~~~~~
/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/vsys/vmem.c:452:35: warning: format specifies type 'long' but the argument has type 'size_t' (aka 'unsigned int') [-Wformat]
vmemMisc.mallocAreas, vmemMisc.mallocBytes,
^~~~~~~~~~~~~~~~~~~~
/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/vsys/vmem.c:453:13: warning: format specifies type 'long' but the argument has type 'size_t' (aka 'unsigned int') [-Wformat]
vmemMisc.freeBytes, vmemMisc.highWater,
^~~~~~~~~~~~~~~~~~
/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/vsys/vmem.c:453:33: warning: format specifies type 'long' but the argument has type 'size_t' (aka 'unsigned int') [-Wformat]
vmemMisc.freeBytes, vmemMisc.highWater,
^~~~~~~~~~~~~~~~~~
15 warnings generated.
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/vnmfb.c
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/vpred.c
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et.c
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/ziofb.c
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[53/102] /nxb-bin/usr/bin/cc -Dmaloc_EXPORTS -I/usr/local/include -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/base -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/psh -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/vsh -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/vsys -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -g -DNDEBUG -fPIC -MD -MT externals/fetk/maloc/src/CMakeFiles/maloc.dir/psh/psh.c.o -MF externals/fetk/maloc/src/CMakeFiles/maloc.dir/psh/psh.c.o.d -o externals/fetk/maloc/src/CMakeFiles/maloc.dir/psh/psh.c.o -c /wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/psh/psh.c
[54/102] /nxb-bin/usr/bin/cc -Dmaloc_EXPORTS -I/usr/local/include -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/base -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/psh -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/vsh -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/vsys -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -g -DNDEBUG -fPIC -MD -MT externals/fetk/maloc/src/CMakeFiles/maloc.dir/psh/vcom.c.o -MF externals/fetk/maloc/src/CMakeFiles/maloc.dir/psh/vcom.c.o.d -o externals/fetk/maloc/src/CMakeFiles/maloc.dir/psh/vcom.c.o -c /wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/psh/vcom.c
[55/102] /nxb-bin/usr/bin/cc -Dmaloc_EXPORTS -I/usr/local/include -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/base -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/psh -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/vsh -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/vsys -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -g -DNDEBUG -fPIC -MD -MT externals/fetk/maloc/src/CMakeFiles/maloc.dir/psh/vmp.c.o -MF externals/fetk/maloc/src/CMakeFiles/maloc.dir/psh/vmp.c.o.d -o externals/fetk/maloc/src/CMakeFiles/maloc.dir/psh/vmp.c.o -c /wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/psh/vmp.c
[56/102] /nxb-bin/usr/bin/cc -Dmaloc_EXPORTS -I/usr/local/include -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/base -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/psh -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/vsh -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/vsys -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -g -DNDEBUG -fPIC -MD -MT externals/fetk/maloc/src/CMakeFiles/maloc.dir/psh/vmpi.c.o -MF externals/fetk/maloc/src/CMakeFiles/maloc.dir/psh/vmpi.c.o.d -o externals/fetk/maloc/src/CMakeFiles/maloc.dir/psh/vmpi.c.o -c /wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/psh/vmpi.c
[57/102] /nxb-bin/usr/bin/cc -Dmaloc_EXPORTS -I/usr/local/include -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/base -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/psh -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/vsh -I/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/vsys -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -g -DNDEBUG -fPIC -MD -MT externals/fetk/maloc/src/CMakeFiles/maloc.dir/vsh/vlex.c.o -MF externals/fetk/maloc/src/CMakeFiles/maloc.dir/vsh/vlex.c.o.d -o externals/fetk/maloc/src/CMakeFiles/maloc.dir/vsh/vlex.c.o -c /wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/src/vsh/vlex.c
[58/102] : && /nxb-bin/usr/bin/cc -fPIC -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -g -DNDEBUG -fstack-protector-strong -shared -Wl,-soname,libmaloc.so -o /wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/lib/libmaloc.so externals/fetk/maloc/src/CMakeFiles/maloc.dir/base/maloc_base.c.o externals/fetk/maloc/src/CMakeFiles/maloc.dir/psh/psh.c.o externals/fetk/maloc/src/CMakeFiles/maloc.dir/psh/vcom.c.o externals/fetk/maloc/src/CMakeFiles/maloc.dir/psh/vmp.c.o externals/fetk/maloc/src/CMakeFiles/maloc.dir/psh/vmpi.c.o externals/fetk/maloc/src/CMakeFiles/maloc.dir/vsh/vlex.c.o externals/fetk/maloc/src/CMakeFiles/maloc.dir/vsh/vpars.c.o externals/fetk/maloc/src/CMakeFiles/maloc.dir/vsh/vpup.c.o externals/fetk/maloc/src/CMakeFiles/maloc.dir/vsh/vsh.c.o externals/fetk/maloc/src/CMakeFiles/maloc.dir/vsh/vyacc.c.o externals/fetk/maloc/src/CMakeFiles/maloc.dir/vsys/vio.c.o externals/fetk/maloc/src/CMakeFiles/maloc.dir/vsys/vio
fb.c.o externals/fetk/maloc/src/CMakeFiles/maloc.dir/vsys/vmem.c.o externals/fetk/maloc/src/CMakeFiles/maloc.dir/vsys/vnm.c.o externals/fetk/maloc/src/CMakeFiles/maloc.dir/vsys/vnmfb.c.o externals/fetk/maloc/src/CMakeFiles/maloc.dir/vsys/vpred.c.o externals/fetk/maloc/src/CMakeFiles/maloc.dir/vsys/vset.c.o externals/fetk/maloc/src/CMakeFiles/maloc.dir/vsys/ziofb.c.o && :
[59/102] : && /nxb-bin/usr/bin/cc -fPIC -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -g -DNDEBUG -fstack-protector-strong -shared -Wl,-soname,libapbs_generic.so -o lib/libapbs_generic.so src/generic/CMakeFiles/apbs_generic.dir/nosh.c.o src/generic/CMakeFiles/apbs_generic.dir/mgparm.c.o src/generic/CMakeFiles/apbs_generic.dir/femparm.c.o src/generic/CMakeFiles/apbs_generic.dir/pbamparm.c.o src/generic/CMakeFiles/apbs_generic.dir/pbsamparm.c.o src/generic/CMakeFiles/apbs_generic.dir/pbeparm.c.o src/generic/CMakeFiles/apbs_generic.dir/bemparm.c.o src/generic/CMakeFiles/apbs_generic.dir/geoflowparm.c.o src/generic/CMakeFiles/apbs_generic.dir/apolparm.c.o src/generic/CMakeFiles/apbs_generic.dir/vacc.c.o src/generic/CMakeFiles/apbs_generic.dir/valist.c.o src/generic/CMakeFiles/apbs_generic.dir/vatom.c.o src/generic/CMakeFiles/apbs_generic.dir/vpbe.c.o src/generic/CMakeFiles/apbs_generic.dir/vcap.c.o src/generic/CMakeFiles/apbs_generic.dir/vclist.c.o src/generic/CMakeFiles/
apbs_generic.dir/vstring.c.o src/generic/CMakeFiles/apbs_generic.dir/vparam.c.o src/generic/CMakeFiles/apbs_generic.dir/vgreen.c.o -L/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/lib -Wl,-rpath,/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/lib: -lm -lstdc++ /wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/lib/libmaloc.so && :
[60/102] : && /nxb-bin/usr/bin/cc -fPIC -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -g -DNDEBUG -fstack-protector-strong -shared -Wl,-soname,libapbs_pmgc.so -o lib/libapbs_pmgc.so src/pmgc/CMakeFiles/apbs_pmgc.dir/buildAd.c.o src/pmgc/CMakeFiles/apbs_pmgc.dir/buildBd.c.o src/pmgc/CMakeFiles/apbs_pmgc.dir/buildGd.c.o src/pmgc/CMakeFiles/apbs_pmgc.dir/buildPd.c.o src/pmgc/CMakeFiles/apbs_pmgc.dir/cgd.c.o src/pmgc/CMakeFiles/apbs_pmgc.dir/gsd.c.o src/pmgc/CMakeFiles/apbs_pmgc.dir/matvecd.c.o src/pmgc/CMakeFiles/apbs_pmgc.dir/mgcsd.c.o src/pmgc/CMakeFiles/apbs_pmgc.dir/mgdrvd.c.o src/pmgc/CMakeFiles/apbs_pmgc.dir/mgsubd.c.o src/pmgc/CMakeFiles/apbs_pmgc.dir/mikpckd.c.o src/pmgc/CMakeFiles/apbs_pmgc.dir/mlinpckd.c.o src/pmgc/CMakeFiles/apbs_pmgc.dir/mypdec.c.o src/pmgc/CMakeFiles/apbs_pmgc.dir/newtond.c.o src/pmgc/CMakeFiles/apbs_pmgc.dir/newdrvd.c.o src/pmgc/CMakeFiles/apbs_pmgc.dir/powerd.c.o src/pmgc/CMakeFiles/apbs_pmgc.dir/smoothd.c.o src/pmgc/CMakeFiles/apbs_pmgc.d
ir/mgfasd.c.o -L/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/lib -Wl,-rpath,/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/lib: -lm -lstdc++ /wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/lib/libmaloc.so && :
FAILED: lib/libapbs_pmgc.so
: && /nxb-bin/usr/bin/cc -fPIC -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -g -DNDEBUG -fstack-protector-strong -shared -Wl,-soname,libapbs_pmgc.so -o lib/libapbs_pmgc.so src/pmgc/CMakeFiles/apbs_pmgc.dir/buildAd.c.o src/pmgc/CMakeFiles/apbs_pmgc.dir/buildBd.c.o src/pmgc/CMakeFiles/apbs_pmgc.dir/buildGd.c.o src/pmgc/CMakeFiles/apbs_pmgc.dir/buildPd.c.o src/pmgc/CMakeFiles/apbs_pmgc.dir/cgd.c.o src/pmgc/CMakeFiles/apbs_pmgc.dir/gsd.c.o src/pmgc/CMakeFiles/apbs_pmgc.dir/matvecd.c.o src/pmgc/CMakeFiles/apbs_pmgc.dir/mgcsd.c.o src/pmgc/CMakeFiles/apbs_pmgc.dir/mgdrvd.c.o src/pmgc/CMakeFiles/apbs_pmgc.dir/mgsubd.c.o src/pmgc/CMakeFiles/apbs_pmgc.dir/mikpckd.c.o src/pmgc/CMakeFiles/apbs_pmgc.dir/mlinpckd.c.o src/pmgc/CMakeFiles/apbs_pmgc.dir/mypdec.c.o src/pmgc/CMakeFiles/apbs_pmgc.dir/newtond.c.o src/pmgc/CMakeFiles/apbs_pmgc.dir/newdrvd.c.o src/pmgc/CMakeFiles/apbs_pmgc.dir/powerd.c.o src/pmgc/CMakeFiles/apbs_pmgc.dir/smoothd.c.o src/pmgc/CMakeFiles/apbs_pmgc.dir/mgfasd
.c.o -L/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/lib -Wl,-rpath,/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/lib: -lm -lstdc++ /wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/maloc/lib/libmaloc.so && :
ld: error: duplicate symbol: charge
>>> defined at mypdec.h:72 (/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/src/pmgc/mypdec.h:72)
>>> src/pmgc/CMakeFiles/apbs_pmgc.dir/cgd.c.o:(charge)
>>> defined at mypdec.h:72 (/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/src/pmgc/mypdec.h:72)
>>> src/pmgc/CMakeFiles/apbs_pmgc.dir/gsd.c.o:(.bss+0x48)
ld: error: duplicate symbol: conc1
>>> defined at mypdec.h:70 (/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/src/pmgc/mypdec.h:70)
>>> src/pmgc/CMakeFiles/apbs_pmgc.dir/cgd.c.o:(conc1)
>>> defined at mypdec.h:70 (/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/src/pmgc/mypdec.h:70)
>>> src/pmgc/CMakeFiles/apbs_pmgc.dir/gsd.c.o:(.bss+0x18)
ld: error: duplicate symbol: conc2
>>> defined at mypdec.h:70 (/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/src/pmgc/mypdec.h:70)
>>> src/pmgc/CMakeFiles/apbs_pmgc.dir/cgd.c.o:(conc2)
>>> defined at mypdec.h:70 (/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/src/pmgc/mypdec.h:70)
>>> src/pmgc/CMakeFiles/apbs_pmgc.dir/gsd.c.o:(.bss+0x20)
ld: error: duplicate symbol: conc3
>>> defined at mypdec.h:70 (/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/src/pmgc/mypdec.h:70)
>>> src/pmgc/CMakeFiles/apbs_pmgc.dir/cgd.c.o:(conc3)
>>> defined at mypdec.h:70 (/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/src/pmgc/mypdec.h:70)
>>> src/pmgc/CMakeFiles/apbs_pmgc.dir/gsd.c.o:(.bss+0x28)
ld: error: duplicate symbol: nion
>>> defined at mypdec.h:71 (/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/src/pmgc/mypdec.h:71)
>>> src/pmgc/CMakeFiles/apbs_pmgc.dir/cgd.c.o:(nion)
>>> defined at mypdec.h:71 (/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/src/pmgc/mypdec.h:71)
>>> src/pmgc/CMakeFiles/apbs_pmgc.dir/gsd.c.o:(.bss+0x40)
ld: error: duplicate symbol: relSize
>>> defined at mypdec.h:70 (/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/src/pmgc/mypdec.h:70)
>>> src/pmgc/CMakeFiles/apbs_pmgc.dir/cgd.c.o:(relSize)
>>> defined at mypdec.h:70 (/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/src/pmgc/mypdec.h:70)
>>> src/pmgc/CMakeFiles/apbs_pmgc.dir/gsd.c.o:(.bss+0x38)
ld: error: duplicate symbol: sconc
>>> defined at mypdec.h:73 (/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/src/pmgc/mypdec.h:73)
>>> src/pmgc/CMakeFiles/apbs_pmgc.dir/cgd.c.o:(sconc)
>>> defined at mypdec.h:73 (/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/src/pmgc/mypdec.h:73)
>>> src/pmgc/CMakeFiles/apbs_pmgc.dir/gsd.c.o:(.bss+0x1D8)
ld: error: duplicate symbol: v1
>>> defined at mypdec.h:70 (/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/src/pmgc/mypdec.h:70)
>>> src/pmgc/CMakeFiles/apbs_pmgc.dir/cgd.c.o:(v1)
>>> defined at mypdec.h:70 (/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/src/pmgc/mypdec.h:70)
>>> src/pmgc/CMakeFiles/apbs_pmgc.dir/gsd.c.o:(.bss+0x0)
ld: error: duplicate symbol: v2
>>> defined at mypdec.h:70 (/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/src/pmgc/mypdec.h:70)
>>> src/pmgc/CMakeFiles/apbs_pmgc.dir/cgd.c.o:(v2)
>>> defined at mypdec.h:70 (/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/src/pmgc/mypdec.h:70)
>>> src/pmgc/CMakeFiles/apbs_pmgc.dir/gsd.c.o:(.bss+0x8)
ld: error: duplicate symbol: v3
>>> defined at mypdec.h:70 (/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/src/pmgc/mypdec.h:70)
>>> src/pmgc/CMakeFiles/apbs_pmgc.dir/cgd.c.o:(v3)
>>> defined at mypdec.h:70 (/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/src/pmgc/mypdec.h:70)
>>> src/pmgc/CMakeFiles/apbs_pmgc.dir/gsd.c.o:(.bss+0x10)
ld: error: duplicate symbol: vol
>>> defined at mypdec.h:70 (/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/src/pmgc/mypdec.h:70)
>>> src/pmgc/CMakeFiles/apbs_pmgc.dir/cgd.c.o:(vol)
>>> defined at mypdec.h:70 (/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/src/pmgc/mypdec.h:70)
>>> src/pmgc/CMakeFiles/apbs_pmgc.dir/gsd.c.o:(.bss+0x30)
ld: error: duplicate symbol: charge
>>> defined at mypdec.h:72 (/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/src/pmgc/mypdec.h:72)
>>> src/pmgc/CMakeFiles/apbs_pmgc.dir/cgd.c.o:(charge)
>>> defined at mypdec.h:72 (/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/src/pmgc/mypdec.h:72)
>>> src/pmgc/CMakeFiles/apbs_pmgc.dir/matvecd.c.o:(.bss+0x48)
ld: error: duplicate symbol: conc1
>>> defined at mypdec.h:70 (/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/src/pmgc/mypdec.h:70)
>>> src/pmgc/CMakeFiles/apbs_pmgc.dir/cgd.c.o:(conc1)
>>> defined at mypdec.h:70 (/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/src/pmgc/mypdec.h:70)
>>> src/pmgc/CMakeFiles/apbs_pmgc.dir/matvecd.c.o:(.bss+0x18)
ld: error: duplicate symbol: conc2
>>> defined at mypdec.h:70 (/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/src/pmgc/mypdec.h:70)
>>> src/pmgc/CMakeFiles/apbs_pmgc.dir/cgd.c.o:(conc2)
>>> defined at mypdec.h:70 (/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/src/pmgc/mypdec.h:70)
>>> src/pmgc/CMakeFiles/apbs_pmgc.dir/matvecd.c.o:(.bss+0x20)
ld: error: duplicate symbol: conc3
>>> defined at mypdec.h:70 (/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/src/pmgc/mypdec.h:70)
>>> src/pmgc/CMakeFiles/apbs_pmgc.dir/cgd.c.o:(conc3)
>>> defined at mypdec.h:70 (/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/src/pmgc/mypdec.h:70)
>>> src/pmgc/CMakeFiles/apbs_pmgc.dir/matvecd.c.o:(.bss+0x28)
ld: error: duplicate symbol: nion
>>> defined at mypdec.h:71 (/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/src/pmgc/mypdec.h:71)
>>> src/pmgc/CMakeFiles/apbs_pmgc.dir/cgd.c.o:(nion)
>>> defined at mypdec.h:71 (/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/src/pmgc/mypdec.h:71)
>>> src/pmgc/CMakeFiles/apbs_pmgc.dir/matvecd.c.o:(.bss+0x40)
ld: error: duplicate symbol: relSize
>>> defined at mypdec.h:70 (/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/src/pmgc/mypdec.h:70)
>>> src/pmgc/CMakeFiles/apbs_pmgc.dir/cgd.c.o:(relSize)
>>> defined at mypdec.h:70 (/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/src/pmgc/mypdec.h:70)
>>> src/pmgc/CMakeFiles/apbs_pmgc.dir/matvecd.c.o:(.bss+0x38)
ld: error: duplicate symbol: sconc
>>> defined at mypdec.h:73 (/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/src/pmgc/mypdec.h:73)
>>> src/pmgc/CMakeFiles/apbs_pmgc.dir/cgd.c.o:(sconc)
>>> defined at mypdec.h:73 (/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/src/pmgc/mypdec.h:73)
>>> src/pmgc/CMakeFiles/apbs_pmgc.dir/matvecd.c.o:(.bss+0x1D8)
ld: error: duplicate symbol: v1
>>> defined at mypdec.h:70 (/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/src/pmgc/mypdec.h:70)
>>> src/pmgc/CMakeFiles/apbs_pmgc.dir/cgd.c.o:(v1)
>>> defined at mypdec.h:70 (/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/src/pmgc/mypdec.h:70)
>>> src/pmgc/CMakeFiles/apbs_pmgc.dir/matvecd.c.o:(.bss+0x0)
ld: error: duplicate symbol: v2
>>> defined at mypdec.h:70 (/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/src/pmgc/mypdec.h:70)
>>> src/pmgc/CMakeFiles/apbs_pmgc.dir/cgd.c.o:(v2)
>>> defined at mypdec.h:70 (/wrkdirs/usr/ports/science/apbs/work/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/src/pmgc/mypdec.h:70)
>>> src/pmgc/CMakeFiles/apbs_pmgc.dir/matvecd.c.o:(.bss+0x8)
ld: error: too many errors emitted, stopping now (use -error-limit=0 to see all errors)
cc: error: linker command failed with exit code 1 (use -v to see invocation)
ninja: build stopped: subcommand failed.
*** Error code 1
Stop.
make: stopped in /usr/ports/science/apbs
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