[package - head-arm64-default][math/py-pysparse] Failed for py27-pysparse-1.3_11 in build/runaway
pkg-fallout at FreeBSD.org
pkg-fallout at FreeBSD.org
Sat Aug 1 13:18:35 UTC 2020
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.
Maintainer: yuri at FreeBSD.org
Last committer: yuri at FreeBSD.org
Ident: $FreeBSD: head/math/py-pysparse/Makefile 534185 2020-05-06 16:11:14Z yuri $
Log URL: http://thunderx1.nyi.freebsd.org/data/head-arm64-default/p542683_s363381/logs/py27-pysparse-1.3_11.log
Build URL: http://thunderx1.nyi.freebsd.org/build.html?mastername=head-arm64-default&build=p542683_s363381
Log:
=>> Building math/py-pysparse
build started at Sat Aug 1 08:53:51 UTC 2020
port directory: /usr/ports/math/py-pysparse
package name: py27-pysparse-1.3_11
building for: FreeBSD head-arm64-default-job-05 13.0-CURRENT FreeBSD 13.0-CURRENT 1300101 arm64
maintained by: yuri at FreeBSD.org
Makefile ident: $FreeBSD: head/math/py-pysparse/Makefile 534185 2020-05-06 16:11:14Z yuri $
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=======================<phase: check-sanity >============================
===> NOTICE:
This port is deprecated; you may wish to reconsider installing it:
Uses deprecated version of python.
It is scheduled to be removed on or after 2020-08-15.
===> License BSD3CLAUSE accepted by the user
===========================================================================
=======================<phase: pkg-depends >============================
===> py27-pysparse-1.3_11 depends on file: /usr/local/sbin/pkg - not found
===> Installing existing package /packages/All/pkg-1.14.6.txz
[head-arm64-default-job-05] Installing pkg-1.14.6...
[head-arm64-default-job-05] Extracting pkg-1.14.6: .......... done
===> py27-pysparse-1.3_11 depends on file: /usr/local/sbin/pkg - found
===> Returning to build of py27-pysparse-1.3_11
===========================================================================
=======================<phase: fetch-depends >============================
===========================================================================
=======================<phase: fetch >============================
===> NOTICE:
This port is deprecated; you may wish to reconsider installing it:
Uses deprecated version of python.
It is scheduled to be removed on or after 2020-08-15.
===> License BSD3CLAUSE accepted by the user
===> Fetching all distfiles required by py27-pysparse-1.3_11 for building
===========================================================================
=======================<phase: checksum >============================
===> NOTICE:
This port is deprecated; you may wish to reconsider installing it:
Uses deprecated version of python.
It is scheduled to be removed on or after 2020-08-15.
===> License BSD3CLAUSE accepted by the user
===> Fetching all distfiles required by py27-pysparse-1.3_11 for building
=> SHA256 Checksum OK for PythonOptimizers-pysparse-1.3-f8430bd_GH0.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
<snip>
running build_py
creating build/lib.freebsd-13.0-CURRENT-arm64-2.7
creating build/lib.freebsd-13.0-CURRENT-arm64-2.7/pysparse
copying pysparse/__init__.py -> build/lib.freebsd-13.0-CURRENT-arm64-2.7/pysparse
copying pysparse/setup.py -> build/lib.freebsd-13.0-CURRENT-arm64-2.7/pysparse
copying pysparse/version.py -> build/lib.freebsd-13.0-CURRENT-arm64-2.7/pysparse
copying build/src.freebsd-13.0-CURRENT-arm64-2.7/pysparse/__config__.py -> build/lib.freebsd-13.0-CURRENT-arm64-2.7/pysparse
creating build/lib.freebsd-13.0-CURRENT-arm64-2.7/pysparse/sparse
copying pysparse/sparse/__init__.py -> build/lib.freebsd-13.0-CURRENT-arm64-2.7/pysparse/sparse
copying pysparse/sparse/setup.py -> build/lib.freebsd-13.0-CURRENT-arm64-2.7/pysparse/sparse
copying pysparse/sparse/pysparseMatrix.py -> build/lib.freebsd-13.0-CURRENT-arm64-2.7/pysparse/sparse
copying pysparse/sparse/sparseMatrix.py -> build/lib.freebsd-13.0-CURRENT-arm64-2.7/pysparse/sparse
copying build/src.freebsd-13.0-CURRENT-arm64-2.7/pysparse/sparse/__config__.py -> build/lib.freebsd-13.0-CURRENT-arm64-2.7/pysparse/sparse
creating build/lib.freebsd-13.0-CURRENT-arm64-2.7/pysparse/eigen
copying pysparse/eigen/__init__.py -> build/lib.freebsd-13.0-CURRENT-arm64-2.7/pysparse/eigen
copying pysparse/eigen/setup.py -> build/lib.freebsd-13.0-CURRENT-arm64-2.7/pysparse/eigen
copying build/src.freebsd-13.0-CURRENT-arm64-2.7/pysparse/eigen/__config__.py -> build/lib.freebsd-13.0-CURRENT-arm64-2.7/pysparse/eigen
creating build/lib.freebsd-13.0-CURRENT-arm64-2.7/pysparse/direct
copying pysparse/direct/directSolver.py -> build/lib.freebsd-13.0-CURRENT-arm64-2.7/pysparse/direct
copying pysparse/direct/__init__.py -> build/lib.freebsd-13.0-CURRENT-arm64-2.7/pysparse/direct
copying pysparse/direct/setup.py -> build/lib.freebsd-13.0-CURRENT-arm64-2.7/pysparse/direct
copying pysparse/direct/pysparseSuperLU.py -> build/lib.freebsd-13.0-CURRENT-arm64-2.7/pysparse/direct
copying pysparse/direct/pysparseUmfpack.py -> build/lib.freebsd-13.0-CURRENT-arm64-2.7/pysparse/direct
copying build/src.freebsd-13.0-CURRENT-arm64-2.7/pysparse/direct/__config__.py -> build/lib.freebsd-13.0-CURRENT-arm64-2.7/pysparse/direct
creating build/lib.freebsd-13.0-CURRENT-arm64-2.7/pysparse/itsolvers
copying pysparse/itsolvers/itsolvers_util.py -> build/lib.freebsd-13.0-CURRENT-arm64-2.7/pysparse/itsolvers
copying pysparse/itsolvers/__init__.py -> build/lib.freebsd-13.0-CURRENT-arm64-2.7/pysparse/itsolvers
copying pysparse/itsolvers/setup.py -> build/lib.freebsd-13.0-CURRENT-arm64-2.7/pysparse/itsolvers
copying build/src.freebsd-13.0-CURRENT-arm64-2.7/pysparse/itsolvers/__config__.py -> build/lib.freebsd-13.0-CURRENT-arm64-2.7/pysparse/itsolvers
creating build/lib.freebsd-13.0-CURRENT-arm64-2.7/pysparse/precon
copying pysparse/precon/__init__.py -> build/lib.freebsd-13.0-CURRENT-arm64-2.7/pysparse/precon
copying pysparse/precon/setup.py -> build/lib.freebsd-13.0-CURRENT-arm64-2.7/pysparse/precon
copying build/src.freebsd-13.0-CURRENT-arm64-2.7/pysparse/precon/__config__.py -> build/lib.freebsd-13.0-CURRENT-arm64-2.7/pysparse/precon
creating build/lib.freebsd-13.0-CURRENT-arm64-2.7/pysparse/tools
copying pysparse/tools/spmatrix_util.py -> build/lib.freebsd-13.0-CURRENT-arm64-2.7/pysparse/tools
copying pysparse/tools/poisson.py -> build/lib.freebsd-13.0-CURRENT-arm64-2.7/pysparse/tools
copying pysparse/tools/sptime.py -> build/lib.freebsd-13.0-CURRENT-arm64-2.7/pysparse/tools
copying pysparse/tools/poisson_vec.py -> build/lib.freebsd-13.0-CURRENT-arm64-2.7/pysparse/tools
copying pysparse/tools/__init__.py -> build/lib.freebsd-13.0-CURRENT-arm64-2.7/pysparse/tools
copying pysparse/tools/sparray.py -> build/lib.freebsd-13.0-CURRENT-arm64-2.7/pysparse/tools
creating build/lib.freebsd-13.0-CURRENT-arm64-2.7/pysparse/misc
copying pysparse/misc/system.py -> build/lib.freebsd-13.0-CURRENT-arm64-2.7/pysparse/misc
copying pysparse/misc/__init__.py -> build/lib.freebsd-13.0-CURRENT-arm64-2.7/pysparse/misc
running build_ext
customize UnixCCompiler
C compiler: cc -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC
creating /tmp/tmpTZurnQ/tmp
creating /tmp/tmpTZurnQ/tmp/tmpTZurnQ
compile options: '-MMD -MF /tmp/tmpTZurnQ/file.c.d -c'
cc: /tmp/tmpTZurnQ/file.c
customize UnixCCompiler using build_ext
building 'pysparse.sparse.spmatrix' extension
compiling C sources
C compiler: cc -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC
creating build/temp.freebsd-13.0-CURRENT-arm64-2.7/pysparse
creating build/temp.freebsd-13.0-CURRENT-arm64-2.7/pysparse/sparse
creating build/temp.freebsd-13.0-CURRENT-arm64-2.7/pysparse/sparse/src
compile options: '-DLENFUNC_OK=1 -Ipysparse/sparse/src -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/wrkdirs/usr/ports/math/py-pysparse/work-py27/pysparse-f8430bd/pysparse/include -I/usr/local/include/python2.7 -c'
cc: pysparse/sparse/src/spmatrixmodule.c
In file included from pysparse/sparse/src/spmatrixmodule.c:9:
In file included from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4:
In file included from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12:
In file included from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1822:
/usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings]
#warning "Using deprecated NumPy API, disable it with " \
^
1 warning generated.
cc -shared -shared -Wl,-rpath=/usr/local/lib/gcc9 -L/usr/local/lib/gcc9 -B/usr/local/bin -fstack-protector-strong -O2 -pipe -fstack-protector-strong -fno-strict-aliasing build/temp.freebsd-13.0-CURRENT-arm64-2.7/pysparse/sparse/src/spmatrixmodule.o -L/usr/local/lib -lpython2.7 -o build/lib.freebsd-13.0-CURRENT-arm64-2.7/pysparse/sparse/spmatrix.so
building 'pysparse.eigen.jdsym' extension
compiling C sources
C compiler: cc -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC
creating build/temp.freebsd-13.0-CURRENT-arm64-2.7/pysparse/eigen
creating build/temp.freebsd-13.0-CURRENT-arm64-2.7/pysparse/eigen/src
compile options: '-DHAVE_CBLAS -Ipysparse/eigen/src -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/wrkdirs/usr/ports/math/py-pysparse/work-py27/pysparse-f8430bd/pysparse/include -I/usr/local/include/python2.7 -c'
cc: pysparse/eigen/src/jdsymmodule.c
In file included from pysparse/eigen/src/jdsymmodule.c:16:
In file included from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4:
In file included from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12:
In file included from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1822:
/usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings]
#warning "Using deprecated NumPy API, disable it with " \
^
1 warning generated.
cc -shared -shared -Wl,-rpath=/usr/local/lib/gcc9 -L/usr/local/lib/gcc9 -B/usr/local/bin -fstack-protector-strong -O2 -pipe -fstack-protector-strong -fno-strict-aliasing build/temp.freebsd-13.0-CURRENT-arm64-2.7/pysparse/eigen/src/jdsymmodule.o -L/usr/local/lib -L/usr/local/lib/gcc9/ -L/usr/local/lib -lopenblas -lgfortran -lopenblas -lgfortran -lpython2.7 -o build/lib.freebsd-13.0-CURRENT-arm64-2.7/pysparse/eigen/jdsym.so
building 'pysparse.direct.umfpack' extension
compiling C sources
C compiler: cc -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC
creating build/temp.freebsd-13.0-CURRENT-arm64-2.7/pysparse/direct
creating build/temp.freebsd-13.0-CURRENT-arm64-2.7/pysparse/direct/umfpack
creating build/temp.freebsd-13.0-CURRENT-arm64-2.7/pysparse/direct/umfpack/src
creating build/temp.freebsd-13.0-CURRENT-arm64-2.7/pysparse/direct/src
creating build/temp.freebsd-13.0-CURRENT-arm64-2.7/pysparse/direct/amd
creating build/temp.freebsd-13.0-CURRENT-arm64-2.7/pysparse/direct/amd/src
compile options: '-DNBLAS=0 -DDINT=1 -Ipysparse/direct/src -Ipysparse/direct/umfpack/include -Ipysparse/direct/amd/include -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/wrkdirs/usr/ports/math/py-pysparse/work-py27/pysparse-f8430bd/pysparse/include -I/usr/local/include/python2.7 -c'
cc: pysparse/direct/umfpack/src/umf_set_stats.c
cc: pysparse/direct/umfpack/src/umfpack_wsolve.ccc: pysparse/direct/umfpack/src/umf_assemble_fixq.c
cc: pysparse/direct/amd/src/amd_defaults.c
cc: pysparse/direct/umfpack/src/umfpack_save_symbolic.c
cc: pysparse/direct/umfpack/src/umfpack_report_control.c
cc: pysparse/direct/umfpack/src/umf_report_vector.c
cc: pysparse/direct/umfpack/src/umfpack_tictoc.c
cc: pysparse/direct/umfpack/src/umfpack_report_symbolic.c
cc: pysparse/direct/umfpack/src/umfpack_load_numeric.c
cc: pysparse/direct/umfpack/src/umfpack_col_to_triplet.c
cc: pysparse/direct/umfpack/src/umfpack_report_vector.c
cc: pysparse/direct/umfpack/src/umfpack_qsymbolic.c
cc: pysparse/direct/umfpack/src/umf_valid_numeric.c
cc: pysparse/direct/amd/src/amd_dump.c
cc: pysparse/direct/umfpack/src/umf_create_element.c
cc: pysparse/direct/umfpack/src/umf_colamd.c
cc: pysparse/direct/umfpack/src/umf_ltsolve.c
cc: pysparse/direct/umfpack/src/umf_mem_alloc_tail_block.c
cc: pysparse/direct/umfpack/src/umf_lhsolve.c
cc: pysparse/direct/umfpack/src/umfpack_get_lunz.c
cc: pysparse/direct/umfpack/src/umfpack_free_symbolic.c
cc: pysparse/direct/umfpack/src/umfpack_report_numeric.c
cc: pysparse/direct/umfpack/src/umf_apply_order.c
cc: pysparse/direct/umfpack/src/umf_scale.c
cc: pysparse/direct/umfpack/src/umfpack_numeric.c
cc: pysparse/direct/umfpack/src/umf_grow_front.c
cc: pysparse/direct/umfpack/src/umf_assemble.c
cc: pysparse/direct/umfpack/src/umf_kernel_init.c
cc: pysparse/direct/amd/src/amd_info.c
cc: pysparse/direct/umfpack/src/umfpack_solve.c
cc: pysparse/direct/umfpack/src/umf_start_front.c
cc: pysparse/direct/umfpack/src/umfpack_scale.c
cc: pysparse/direct/umfpack/src/umf_scale_column.c
cc: pysparse/direct/amd/src/amd_valid.c
cc: pysparse/direct/umfpack/src/umfpack_defaults.c
cc: pysparse/direct/umfpack/src/umf_valid_symbolic.c
cc: pysparse/direct/umfpack/src/umfpack_report_info.c
cc: pysparse/direct/umfpack/src/umf_kernel.c
cc: pysparse/direct/umfpack/src/umf_free.c
cc: pysparse/direct/umfpack/src/umf_usolve.c
cc: pysparse/direct/umfpack/src/umf_triplet_nomap_nox.c
cc: pysparse/direct/umfpack/src/umf_transpose.c
cc: pysparse/direct/amd/src/amd_post_tree.c
cc: pysparse/direct/umfpack/src/umf_solve.c
cc: pysparse/direct/umfpack/src/umf_build_tuples.c
cc: pysparse/direct/umfpack/src/umf_realloc.c
cc: pysparse/direct/umfpack/src/umfpack_report_triplet.c
cc: pysparse/direct/amd/src/amd_1.c
cc: pysparse/direct/umfpack/src/umfpack_get_symbolic.c
cc: pysparse/direct/umfpack/src/umf_uhsolve.c
cc: pysparse/direct/umfpack/src/umf_triplet_nomap_x.c
cc: pysparse/direct/umfpack/src/umfpack_save_numeric.c
cc: pysparse/direct/umfpack/src/umf_symbolic_usage.c
cc: pysparse/direct/umfpack/src/umfpack_report_status.c
cc: pysparse/direct/umfpack/src/umf_extend_front.c
cc: pysparse/direct/umfpack/src/umfpack_load_symbolic.c
cc: pysparse/direct/umfpack/src/umf_lsolve.c
cc: pysparse/direct/umfpack/src/umf_fsize.c
cc: pysparse/direct/umfpack/src/umf_row_search.c
cc: pysparse/direct/umfpack/src/umfpack_triplet_to_col.c
cc: pysparse/direct/umfpack/src/umf_triplet_map_nox.c
cc: pysparse/direct/umfpack/src/umf_kernel_wrapup.c
cc: pysparse/direct/umfpack/src/umf_get_memory.c
cc: pysparse/direct/umfpack/src/umf_mem_init_memoryspace.c
cc: pysparse/direct/umfpack/src/umf_singletons.c
cc: pysparse/direct/umfpack/src/umf_store_lu.c
cc: pysparse/direct/umfpack/src/umfpack_report_matrix.c
cc: pysparse/direct/umfpack/src/umfpack_symbolic.c
cc: pysparse/direct/src/umfpackmodule.c
cc: pysparse/direct/umfpack/src/umf_blas3_update.c
cc: pysparse/direct/umfpack/src/umf_init_front.c
In file included from pysparse/direct/src/umfpackmodule.c:64:
In file included from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4:
In file included from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12:
In file included from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1822:
/usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings]
#warning "Using deprecated NumPy API, disable it with " \
^
cc: pysparse/direct/amd/src/amd_postorder.c
cc: pysparse/direct/umfpack/src/umf_triplet_map_x.c
cc: pysparse/direct/umfpack/src/umf_mem_alloc_element.c
cc: pysparse/direct/umfpack/src/umfpack_free_numeric.c
cc: pysparse/direct/umfpack/src/umf_tuple_lengths.c
cc: pysparse/direct/umfpack/src/umf_2by2.c
cc: pysparse/direct/umfpack/src/umf_report_perm.c
cc: pysparse/direct/umfpack/src/umf_malloc.c
cc: pysparse/direct/amd/src/amd_control.c
cc: pysparse/direct/umfpack/src/umf_analyze.c
1 warning generated.
cc: pysparse/direct/umfpack/src/umf_local_search.c
cc: pysparse/direct/umfpack/src/umf_mem_alloc_head_block.c
cc: pysparse/direct/umfpack/src/umfpack_report_perm.c
cc: pysparse/direct/umfpack/src/umfpack_transpose.c
cc: pysparse/direct/umfpack/src/umfpack_get_numeric.c
cc: pysparse/direct/umfpack/src/umfpack_timer.c
cc: pysparse/direct/umfpack/src/umf_is_permutation.c
cc: pysparse/direct/umfpack/src/umf_dump.c
cc: pysparse/direct/amd/src/amd_order.c
cc: pysparse/direct/umfpack/src/umf_mem_free_tail_block.c
cc: pysparse/direct/umfpack/src/umf_utsolve.c
=>> Killing runaway build after 14400 seconds with no output
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