[RELEASE - 83i386-default] Build failed for avogadro-1.1.0 during build
pkg-fallout at FreeBSD.org
pkg-fallout at FreeBSD.org
Wed Aug 21 12:27:04 UTC 2013
Maintainer: ports at FreeBSD.org
Last committer: ak at FreeBSD.org
Ident: $FreeBSD: head/science/avogadro/Makefile 324744 2013-08-14 22:35:50Z ak $
Log URL: http://beefy1.isc.freebsd.org/bulk/83i386-default/2013-08-21_01h01m01s/logs/avogadro-1.1.0.log
Build URL: http://beefy1.isc.freebsd.org/bulk/83i386-default/2013-08-21_01h01m01s
Log:
====>> Building science/avogadro
build started at Wed Aug 21 11:45:05 UTC 2013
port directory: /usr/ports/science/avogadro
building for: FreeBSD 83i386-default-job-19 8.3-RELEASE FreeBSD 8.3-RELEASE i386
maintained by: ports at FreeBSD.org
Makefile ident: $FreeBSD: head/science/avogadro/Makefile 324744 2013-08-14 22:35:50Z ak $
Poudriere version: 3.1-pre
---Begin Environment---
UNAME_m=i386
UNAME_p=i386
OSVERSION=803000
UNAME_v=FreeBSD 8.3-RELEASE
UNAME_r=8.3-RELEASE
FTP_PASSIVE_MODE=YES
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
MASTERMNT=/usr/local/poudriere/data/build/83i386-default/ref
PKG_EXT=txz
FORCE_PACKAGE=yes
tpid=53884
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/games:/usr/local/sbin:/usr/local/bin:/root/bin
POUDRIERE_BUILD_TYPE=bulk
NBPARALLEL=24
PKGNG=1
PKGNAME=avogadro-1.1.0
PKG_DELETE=/usr/local/sbin/pkg delete -y -f
PKG_ADD=/usr/local/sbin/pkg add
PWD=/root
MASTERNAME=83i386-default
USER=root
HOME=/root
POUDRIERE_VERSION=3.1-pre
SKIPSANITY=0
LOCALBASE=/usr/local
PACKAGE_BUILDING=yes
---End Environment---
---Begin OPTIONS List---
===> The following configuration options are available for avogadro-1.1.0:
PYTHON=on: Python bindings or support
===> Use 'make config' to modify these settings
---End OPTIONS List---
--CONFIGURE_ARGS--
--with-qt-includes=/usr/local/include/qt4 --with-qt-libraries=/usr/local/lib/qt4 --with-extra-libs=/usr/local/lib --with-extra-includes=/usr/local/include
--End CONFIGURE_ARGS--
--CONFIGURE_ENV--
TMPDIR="/tmp" TMPDIR="/tmp" PYTHON="/usr/local/bin/python2.7" MOC="/usr/local/bin/moc-qt4" UIC="/usr/local/bin/uic-qt4" LIBS="" QMAKE="/usr/local/bin/qmake-qt4" QMAKESPEC="/usr/local/share/qt4/mkspecs/freebsd-g++" QTDIR="/usr/local" PKG_CONFIG=pkgconf SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--
--MAKE_ENV--
TMPDIR="/tmp" TMPDIR="/tmp" QMAKESPEC="/usr/local/share/qt4/mkspecs/freebsd-g++" SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local LOCALBASE=/usr/local LIBDIR="/usr/lib" CC="cc" CFLAGS="-O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing" CPP="cpp" CPPFLAGS="" LDFLAGS=" -L/usr/local/lib" CXX="c++" CXXFLAGS="-O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing" MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -o root -g wheel -m 555" BSD_INSTALL_LIB="install -s -o root -g wheel -m 444" BSD_INSTALL_SCRIPT="install -o root -g wheel -m 555" BSD_INSTALL_DATA="install -o root -g wheel -m 444" BSD_INSTALL_MAN="install -o root -g wheel -m 444"
--End MAKE_ENV--
--SUB_LIST--
PREFIX=/usr/local
LOCALBASE=/usr/local
DATADIR=/usr/local/share/avogadro
DOCSDIR=/usr/local/share/doc/avogadro
EXAMPLESDIR=/usr/local/share/examples/avogadro
WWWDIR=/usr/local/www/avogadro
ETCDIR=/usr/local/etc/avogadro
--End SUB_LIST--
---Begin make.conf---
ARCH=i386
MACHINE=i386
MACHINE_ARCH=i386
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PACKAGES=/packages
DISTDIR=/distfiles
#### /usr/local/etc/poudriere.d/make.conf ####
WITH_PKGNG=yes
NO_RESTRICTED=yes
DISABLE_MAKE_JOBS=yes
---End make.conf---
===> Cleaning for avogadro-1.1.0
=======================<phase: check-config >============================
=========================================================================
=======================<phase: pkg-depends >============================
===> avogadro-1.1.0 depends on file: /usr/local/sbin/pkg - not found
===> Verifying install for /usr/local/sbin/pkg in /usr/ports/ports-mgmt/pkg
===> Installing existing package /packages/All/pkg-1.1.4_1.txz
Installing pkg-1.1.4_1... done
If you are upgrading from the old package format, first run:
# pkg2ng
===> Returning to build of avogadro-1.1.0
=========================================================================
=======================<phase: fetch-depends >============================
=========================================================================
=======================<phase: fetch >============================
===> License GPLv2 accepted by the user
===> Fetching all distfiles required by avogadro-1.1.0 for building
=========================================================================
=======================<phase: checksum >============================
===> License GPLv2 accepted by the user
===> Fetching all distfiles required by avogadro-1.1.0 for building
=> SHA256 Checksum OK for avogadro-1.1.0.tar.bz2.
=========================================================================
=======================<phase: extract-depends>============================
=========================================================================
=======================<phase: extract >============================
===> License GPLv2 accepted by the user
===> Fetching all distfiles required by avogadro-1.1.0 for building
===> Extracting for avogadro-1.1.0
=> SHA256 Checksum OK for avogadro-1.1.0.tar.bz2.
=========================================================================
=======================<phase: patch-depends >============================
=========================================================================
=======================<phase: patch >============================
===> Patching for avogadro-1.1.0
===> Applying FreeBSD patches for avogadro-1.1.0
=========================================================================
=======================<phase: build-depends >============================
===> avogadro-1.1.0 depends on file: /usr/local/libdata/pkgconfig/eigen2.pc - not found
===> Verifying install for /usr/local/libdata/pkgconfig/eigen2.pc in /usr/ports/math/eigen2
===> Installing existing package /packages/All/eigen-2.0.17,1.txz
Installing eigen-2.0.17,1... done
===> Returning to build of avogadro-1.1.0
===> avogadro-1.1.0 depends on file: /usr/local/lib/python2.7/site-packages/numpy/core/numeric.py - not found
===> Verifying install for /usr/local/lib/python2.7/site-packages/numpy/core/numeric.py in /usr/ports/math/py-numpy
===> Installing existing package /packages/All/py27-numpy-1.7.0_1,1.txz
Installing py27-numpy-1.7.0_1,1...Installing suitesparse-4.0.2_1...Installing mpfr-3.1.2...Installing gmp-5.1.2... done
done
Installing mpc-0.9... done
Installing lapack-3.4.2...Installing blas-3.4.2...Installing gcc-ecj-4.5... done
Installing gcc-4.6.3...Installing gettext-0.18.3...Installing libiconv-1.14_1... done
done
Installing binutils-2.23.2... done
done
done
done
done
Installing python27-2.7.5_2... done
Installing python2-2... done
Installing python-2.7,2... done
Installing py27-nose-1.3.0...Installing py27-distribute-0.6.35... done
215
238
done
done
====
Note that some of the standard modules are provided as separate
ports since they require extra dependencies:
bsddb databases/py-bsddb
gdbm databases/py-gdbm
sqlite3 databases/py-sqlite3
tkinter x11-toolkits/py-tkinter
Install them as needed.
====
===> Returning to build of avogadro-1.1.0
===> avogadro-1.1.0 depends on package: py27-sip>0 - not found
===> Verifying install for py27-sip>0 in /usr/ports/devel/py-sip
===> Installing existing package /packages/All/py27-sip-4.14.7,1.txz
Installing py27-sip-4.14.7,1... done
===> Returning to build of avogadro-1.1.0
===> avogadro-1.1.0 depends on file: /usr/local/bin/python2.7 - found
===> avogadro-1.1.0 depends on executable: python - found
===> avogadro-1.1.0 depends on file: /usr/local/bin/cmake - not found
===> Verifying install for /usr/local/bin/cmake in /usr/ports/devel/cmake
===> Installing existing package /packages/All/cmake-2.8.11.2.txz
Installing cmake-2.8.11.2...Installing cmake-modules-2.8.11.2... done
done
===> Returning to build of avogadro-1.1.0
===> avogadro-1.1.0 depends on executable: pkgconf - not found
===> Verifying install for pkgconf in /usr/ports/devel/pkgconf
===> Installing existing package /packages/All/pkgconf-0.9.2_1.txz
Installing pkgconf-0.9.2_1... done
===> Returning to build of avogadro-1.1.0
===> avogadro-1.1.0 depends on file: /usr/local/libdata/pkgconfig/glproto.pc - not found
===> Verifying install for /usr/local/libdata/pkgconfig/glproto.pc in /usr/ports/x11/glproto
===> Installing existing package /packages/All/glproto-1.4.16.txz
Installing glproto-1.4.16... done
===> Returning to build of avogadro-1.1.0
===> avogadro-1.1.0 depends on file: /usr/local/libdata/pkgconfig/dri2proto.pc - not found
===> Verifying install for /usr/local/libdata/pkgconfig/dri2proto.pc in /usr/ports/x11/dri2proto
===> Installing existing package /packages/All/dri2proto-2.8.txz
Installing dri2proto-2.8... done
===> Returning to build of avogadro-1.1.0
===> avogadro-1.1.0 depends on file: /usr/local/lib/qt4/libQtGui.so - not found
===> Verifying install for /usr/local/lib/qt4/libQtGui.so in /usr/ports/x11-toolkits/qt4-gui
===> Installing existing package /packages/All/qt4-gui-4.8.4.txz
Installing qt4-gui-4.8.4...Installing xset-1.2.3_1...Installing xproto-7.0.24... done
Installing xextproto-7.2.1... done
Installing libxcb-1.9.1...Installing libXdmcp-1.1.1... done
Installing libXau-1.0.8... done
Installing libxml2-2.8.0_2... done
Installing libpthread-stubs-0.3_3... done
done
Installing libXext-1.3.2,1...Installing libX11-1.6.1,1...Installing kbproto-1.0.6... done
done
<snip>
cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions/quantuminput && /usr/bin/c++ -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dinputfileextension_EXPORTS -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fPIC -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/usr/local/include/python2.7 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions -I/wrkdirs/usr/ports/science
/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions/gl2ps -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions/quantuminput -o CMakeFiles/inputfileextension.dir/gamessukinputdialog.cpp.o -c /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/gamessukinputdialog.cpp
/usr/local/bin/cmake -E cmake_progress_report /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/CMakeFiles
[ 76%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/gaussianinputdialog.cpp.o
cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions/quantuminput && /usr/bin/c++ -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dinputfileextension_EXPORTS -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fPIC -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/usr/local/include/python2.7 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions -I/wrkdirs/usr/ports/science
/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions/gl2ps -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions/quantuminput -o CMakeFiles/inputfileextension.dir/gaussianinputdialog.cpp.o -c /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/gaussianinputdialog.cpp
/usr/local/bin/cmake -E cmake_progress_report /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/CMakeFiles
[ 76%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/molproinputdialog.cpp.o
cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions/quantuminput && /usr/bin/c++ -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dinputfileextension_EXPORTS -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fPIC -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/usr/local/include/python2.7 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions -I/wrkdirs/usr/ports/science
/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions/gl2ps -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions/quantuminput -o CMakeFiles/inputfileextension.dir/molproinputdialog.cpp.o -c /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/molproinputdialog.cpp
/usr/local/bin/cmake -E cmake_progress_report /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/CMakeFiles 63
[ 77%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/mopacinputdialog.cpp.o
cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions/quantuminput && /usr/bin/c++ -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dinputfileextension_EXPORTS -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fPIC -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/usr/local/include/python2.7 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions -I/wrkdirs/usr/ports/science
/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions/gl2ps -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions/quantuminput -o CMakeFiles/inputfileextension.dir/mopacinputdialog.cpp.o -c /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/mopacinputdialog.cpp
/usr/local/bin/cmake -E cmake_progress_report /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/CMakeFiles
[ 77%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/nwcheminputdialog.cpp.o
cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions/quantuminput && /usr/bin/c++ -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dinputfileextension_EXPORTS -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fPIC -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/usr/local/include/python2.7 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions -I/wrkdirs/usr/ports/science
/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions/gl2ps -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions/quantuminput -o CMakeFiles/inputfileextension.dir/nwcheminputdialog.cpp.o -c /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/nwcheminputdialog.cpp
/usr/local/bin/cmake -E cmake_progress_report /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/CMakeFiles
[ 77%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/qcheminputdialog.cpp.o
cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions/quantuminput && /usr/bin/c++ -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dinputfileextension_EXPORTS -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fPIC -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/usr/local/include/python2.7 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions -I/wrkdirs/usr/ports/science
/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions/gl2ps -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions/quantuminput -o CMakeFiles/inputfileextension.dir/qcheminputdialog.cpp.o -c /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/qcheminputdialog.cpp
/usr/local/bin/cmake -E cmake_progress_report /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/CMakeFiles
[ 77%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/teracheminputdialog.cpp.o
cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions/quantuminput && /usr/bin/c++ -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dinputfileextension_EXPORTS -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fPIC -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/usr/local/include/python2.7 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions -I/wrkdirs/usr/ports/science
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[ 77%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/moc_inputfileextension.cxx.o
cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions/quantuminput && /usr/bin/c++ -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dinputfileextension_EXPORTS -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fPIC -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/usr/local/include/python2.7 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions -I/wrkdirs/usr/ports/science
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cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions/quantuminput && /usr/bin/c++ -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dinputfileextension_EXPORTS -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fPIC -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/usr/local/include/python2.7 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions -I/wrkdirs/usr/ports/science
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[ 77%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/moc_abinitinputdialog.cxx.o
cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions/quantuminput && /usr/bin/c++ -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dinputfileextension_EXPORTS -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fPIC -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/usr/local/include/python2.7 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions -I/wrkdirs/usr/ports/science
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[ 77%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/moc_daltoninputdialog.cxx.o
cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions/quantuminput && /usr/bin/c++ -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dinputfileextension_EXPORTS -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fPIC -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/usr/local/include/python2.7 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions -I/wrkdirs/usr/ports/science
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cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions/quantuminput && /usr/bin/c++ -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dinputfileextension_EXPORTS -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fPIC -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/usr/local/include/python2.7 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions -I/wrkdirs/usr/ports/science
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[ 78%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/moc_gaussianinputdialog.cxx.o
cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions/quantuminput && /usr/bin/c++ -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dinputfileextension_EXPORTS -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fPIC -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/usr/local/include/python2.7 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions -I/wrkdirs/usr/ports/science
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[ 78%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/moc_molproinputdialog.cxx.o
cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions/quantuminput && /usr/bin/c++ -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dinputfileextension_EXPORTS -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fPIC -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/usr/local/include/python2.7 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions -I/wrkdirs/usr/ports/science
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[ 78%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/moc_mopacinputdialog.cxx.o
cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions/quantuminput && /usr/bin/c++ -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dinputfileextension_EXPORTS -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fPIC -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/usr/local/include/python2.7 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions -I/wrkdirs/usr/ports/science
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[ 78%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/moc_nwcheminputdialog.cxx.o
cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions/quantuminput && /usr/bin/c++ -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dinputfileextension_EXPORTS -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fPIC -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/usr/local/include/python2.7 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions -I/wrkdirs/usr/ports/science
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[ 78%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/moc_qcheminputdialog.cxx.o
cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions/quantuminput && /usr/bin/c++ -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dinputfileextension_EXPORTS -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fPIC -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/usr/local/include/python2.7 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions -I/wrkdirs/usr/ports/science
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[ 78%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/moc_teracheminputdialog.cxx.o
cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions/quantuminput && /usr/bin/c++ -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dinputfileextension_EXPORTS -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fPIC -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/usr/local/include/python2.7 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions -I/wrkdirs/usr/ports/science
/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions/gl2ps -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions/quantuminput -o CMakeFiles/inputfileextension.dir/moc_teracheminputdialog.cxx.o -c /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/moc_teracheminputdialog.cxx
Linking CXX shared module ../../../../lib/inputfileextension.so
cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/extensions/quantuminput && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/inputfileextension.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -L/usr/local/lib -shared -Wl,-soname,inputfileextension.so -o ../../../../lib/inputfileextension.so CMakeFiles/inputfileextension.dir/inputfileextension.cpp.o CMakeFiles/inputfileextension.dir/inputdialog.cpp.o CMakeFiles/inputfileextension.dir/abinitinputdialog.cpp.o CMakeFiles/inputfileextension.dir/daltoninputdialog.cpp.o CMakeFiles/inputfileextension.dir/gamessukinputdialog.cpp.o CMakeFiles/inputfileextension.dir/gaussianinputdialog.cpp.o CMakeFiles/inputfileextension.dir/molproinputdialog.cpp.o CMakeFiles/inputfileextension.dir/mopacinputdialog.cpp.o CMakeFiles/inputfileextension.dir/nwcheminputdialog.cpp.o CMakeFiles/inputfileextension.dir/qcheminputdialog.cpp.o CMakeFiles/inputfileextension.dir/teracheminputdialog.cpp.o CMakeFiles/inputfileextension.dir/moc_inputfileextension.
cxx.o CMakeFiles/inputfileextension.dir/moc_inputdialog.cxx.o CMakeFiles/inputfileextension.dir/moc_abinitinputdialog.cxx.o CMakeFiles/inputfileextension.dir/moc_daltoninputdialog.cxx.o CMakeFiles/inputfileextension.dir/moc_gamessukinputdialog.cxx.o CMakeFiles/inputfileextension.dir/moc_gaussianinputdialog.cxx.o CMakeFiles/inputfileextension.dir/moc_molproinputdialog.cxx.o CMakeFiles/inputfileextension.dir/moc_mopacinputdialog.cxx.o CMakeFiles/inputfileextension.dir/moc_nwcheminputdialog.cxx.o CMakeFiles/inputfileextension.dir/moc_qcheminputdialog.cxx.o CMakeFiles/inputfileextension.dir/moc_teracheminputdialog.cxx.o -L/usr/local/lib ../../../../lib/libavogadro.so.1.1.0 /usr/local/lib/qt4/libQtCore.so /usr/local/lib/qt4/libQtGui.so -lopenbabel -Wl,-rpath,/usr/local/lib:/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/lib:/usr/local/lib/qt4:
/usr/local/bin/cmake -E cmake_progress_report /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/CMakeFiles 60 61 62 63 64
[ 78%] Built target inputfileextension
/usr/bin/make -f libavogadro/src/colors/CMakeFiles/atomindexcolor.dir/build.make libavogadro/src/colors/CMakeFiles/atomindexcolor.dir/depend
/usr/local/bin/cmake -E cmake_progress_report /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/CMakeFiles
[ 78%] Generating moc_atomindexcolor.cxx
cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors && /usr/local/bin/moc-qt4 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/include -I/usr/local/include/qt4 -I/usr/local/include/qt4/QtOpenGL -I/usr/local/include/qt4/QtGui -I/usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/usr/local/include/python2.7 -I/usr/local/include/qt4 -I/usr/local/include/qt4/QtOpenGL -I/usr/local/include/qt4/QtGui -I/usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors -D_BSD_SOURCE -DHAVE_GCC_VISIBILITY -DENABLE_PYTHON -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_PLUGIN -DQT_SHARED -DBOOST_TT_HAS_OPERATOR_HPP_INCLUDED -o /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors/moc_atomindexcolo
r.cxx /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors/atomindexcolor.h
cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0 && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0 /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0 /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors/CMakeFiles/atomindexcolor.dir/DependInfo.cmake
Scanning dependencies of target atomindexcolor
/usr/bin/make -f libavogadro/src/colors/CMakeFiles/atomindexcolor.dir/build.make libavogadro/src/colors/CMakeFiles/atomindexcolor.dir/build
/usr/local/bin/cmake -E cmake_progress_report /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/CMakeFiles
[ 78%] Building CXX object libavogadro/src/colors/CMakeFiles/atomindexcolor.dir/atomindexcolor.cpp.o
cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors && /usr/bin/c++ -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Datomindexcolor_EXPORTS -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fPIC -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/usr/local/include/python2.7 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors -o CMakeFiles/atomindexcolor.dir/atomindexcolor.cpp.o
-c /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors/atomindexcolor.cpp
/usr/local/bin/cmake -E cmake_progress_report /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/CMakeFiles
[ 78%] Building CXX object libavogadro/src/colors/CMakeFiles/atomindexcolor.dir/moc_atomindexcolor.cxx.o
cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors && /usr/bin/c++ -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Datomindexcolor_EXPORTS -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fPIC -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/usr/local/include/python2.7 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors -o CMakeFiles/atomindexcolor.dir/moc_atomindexcolor.c
xx.o -c /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors/moc_atomindexcolor.cxx
Linking CXX shared module ../../../lib/atomindexcolor.so
cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/atomindexcolor.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -L/usr/local/lib -shared -Wl,-soname,atomindexcolor.so -o ../../../lib/atomindexcolor.so CMakeFiles/atomindexcolor.dir/atomindexcolor.cpp.o CMakeFiles/atomindexcolor.dir/moc_atomindexcolor.cxx.o -L/usr/local/lib ../../../lib/libavogadro.so.1.1.0 /usr/local/lib/qt4/libQtCore.so /usr/local/lib/qt4/libQtGui.so -lopenbabel /usr/local/lib/libGLU.so /usr/local/lib/libGL.so /usr/local/lib/libSM.so /usr/local/lib/libICE.so /usr/local/lib/libX11.so /usr/local/lib/libXext.so -Wl,-rpath,/usr/local/lib:/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/lib:/usr/local/lib/qt4:
/usr/local/bin/cmake -E cmake_progress_report /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/CMakeFiles
[ 78%] Built target atomindexcolor
/usr/bin/make -f libavogadro/src/colors/CMakeFiles/chargecolor.dir/build.make libavogadro/src/colors/CMakeFiles/chargecolor.dir/depend
/usr/local/bin/cmake -E cmake_progress_report /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/CMakeFiles
[ 78%] Generating moc_chargecolor.cxx
cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors && /usr/local/bin/moc-qt4 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/include -I/usr/local/include/qt4 -I/usr/local/include/qt4/QtOpenGL -I/usr/local/include/qt4/QtGui -I/usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/usr/local/include/python2.7 -I/usr/local/include/qt4 -I/usr/local/include/qt4/QtOpenGL -I/usr/local/include/qt4/QtGui -I/usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors -D_BSD_SOURCE -DHAVE_GCC_VISIBILITY -DENABLE_PYTHON -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_PLUGIN -DQT_SHARED -DBOOST_TT_HAS_OPERATOR_HPP_INCLUDED -o /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors/moc_chargecolor.c
xx /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors/chargecolor.h
cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0 && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0 /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0 /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors/CMakeFiles/chargecolor.dir/DependInfo.cmake
Scanning dependencies of target chargecolor
/usr/bin/make -f libavogadro/src/colors/CMakeFiles/chargecolor.dir/build.make libavogadro/src/colors/CMakeFiles/chargecolor.dir/build
/usr/local/bin/cmake -E cmake_progress_report /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/CMakeFiles
[ 78%] Building CXX object libavogadro/src/colors/CMakeFiles/chargecolor.dir/chargecolor.cpp.o
cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors && /usr/bin/c++ -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dchargecolor_EXPORTS -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fPIC -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/usr/local/include/python2.7 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors -o CMakeFiles/chargecolor.dir/chargecolor.cpp.o -c /wrkd
irs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors/chargecolor.cpp
/usr/local/bin/cmake -E cmake_progress_report /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/CMakeFiles
[ 78%] Building CXX object libavogadro/src/colors/CMakeFiles/chargecolor.dir/moc_chargecolor.cxx.o
cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors && /usr/bin/c++ -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dchargecolor_EXPORTS -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fPIC -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/usr/local/include/python2.7 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors -o CMakeFiles/chargecolor.dir/moc_chargecolor.cxx.o -c /
wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors/moc_chargecolor.cxx
Linking CXX shared module ../../../lib/chargecolor.so
cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/chargecolor.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -L/usr/local/lib -shared -Wl,-soname,chargecolor.so -o ../../../lib/chargecolor.so CMakeFiles/chargecolor.dir/chargecolor.cpp.o CMakeFiles/chargecolor.dir/moc_chargecolor.cxx.o -L/usr/local/lib ../../../lib/libavogadro.so.1.1.0 /usr/local/lib/qt4/libQtCore.so /usr/local/lib/qt4/libQtGui.so -lopenbabel /usr/local/lib/libGLU.so /usr/local/lib/libGL.so /usr/local/lib/libSM.so /usr/local/lib/libICE.so /usr/local/lib/libX11.so /usr/local/lib/libXext.so -Wl,-rpath,/usr/local/lib:/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/lib:/usr/local/lib/qt4:
/usr/local/bin/cmake -E cmake_progress_report /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/CMakeFiles
[ 78%] Built target chargecolor
/usr/bin/make -f libavogadro/src/colors/CMakeFiles/customcolor.dir/build.make libavogadro/src/colors/CMakeFiles/customcolor.dir/depend
/usr/local/bin/cmake -E cmake_progress_report /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/CMakeFiles 50
[ 79%] Generating moc_customcolor.cxx
cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors && /usr/local/bin/moc-qt4 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/include -I/usr/local/include/qt4 -I/usr/local/include/qt4/QtOpenGL -I/usr/local/include/qt4/QtGui -I/usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/usr/local/include/python2.7 -I/usr/local/include/qt4 -I/usr/local/include/qt4/QtOpenGL -I/usr/local/include/qt4/QtGui -I/usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors -D_BSD_SOURCE -DHAVE_GCC_VISIBILITY -DENABLE_PYTHON -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_PLUGIN -DQT_SHARED -DBOOST_TT_HAS_OPERATOR_HPP_INCLUDED -o /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors/moc_customcolor.c
xx /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors/customcolor.h
cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0 && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0 /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0 /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors/CMakeFiles/customcolor.dir/DependInfo.cmake
Scanning dependencies of target customcolor
/usr/bin/make -f libavogadro/src/colors/CMakeFiles/customcolor.dir/build.make libavogadro/src/colors/CMakeFiles/customcolor.dir/build
/usr/local/bin/cmake -E cmake_progress_report /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/CMakeFiles
[ 79%] Building CXX object libavogadro/src/colors/CMakeFiles/customcolor.dir/customcolor.cpp.o
cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors && /usr/bin/c++ -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dcustomcolor_EXPORTS -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fPIC -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/usr/local/include/python2.7 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors -o CMakeFiles/customcolor.dir/customcolor.cpp.o -c /wrkd
irs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors/customcolor.cpp
/usr/local/bin/cmake -E cmake_progress_report /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/CMakeFiles
[ 79%] Building CXX object libavogadro/src/colors/CMakeFiles/customcolor.dir/moc_customcolor.cxx.o
cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors && /usr/bin/c++ -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dcustomcolor_EXPORTS -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fPIC -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/usr/local/include/python2.7 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors -o CMakeFiles/customcolor.dir/moc_customcolor.cxx.o -c /
wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors/moc_customcolor.cxx
Linking CXX shared module ../../../lib/customcolor.so
cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/customcolor.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -L/usr/local/lib -shared -Wl,-soname,customcolor.so -o ../../../lib/customcolor.so CMakeFiles/customcolor.dir/customcolor.cpp.o CMakeFiles/customcolor.dir/moc_customcolor.cxx.o -L/usr/local/lib ../../../lib/libavogadro.so.1.1.0 /usr/local/lib/qt4/libQtCore.so /usr/local/lib/qt4/libQtGui.so -lopenbabel /usr/local/lib/libGLU.so /usr/local/lib/libGL.so /usr/local/lib/libSM.so /usr/local/lib/libICE.so /usr/local/lib/libX11.so /usr/local/lib/libXext.so -Wl,-rpath,/usr/local/lib:/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/lib:/usr/local/lib/qt4:
/usr/local/bin/cmake -E cmake_progress_report /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/CMakeFiles 50
[ 79%] Built target customcolor
/usr/bin/make -f libavogadro/src/colors/CMakeFiles/distancecolor.dir/build.make libavogadro/src/colors/CMakeFiles/distancecolor.dir/depend
/usr/local/bin/cmake -E cmake_progress_report /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/CMakeFiles
[ 79%] Generating moc_distancecolor.cxx
cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors && /usr/local/bin/moc-qt4 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/include -I/usr/local/include/qt4 -I/usr/local/include/qt4/QtOpenGL -I/usr/local/include/qt4/QtGui -I/usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/usr/local/include/python2.7 -I/usr/local/include/qt4 -I/usr/local/include/qt4/QtOpenGL -I/usr/local/include/qt4/QtGui -I/usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors -D_BSD_SOURCE -DHAVE_GCC_VISIBILITY -DENABLE_PYTHON -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_PLUGIN -DQT_SHARED -DBOOST_TT_HAS_OPERATOR_HPP_INCLUDED -o /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors/moc_distancecolor
.cxx /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors/distancecolor.h
cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0 && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0 /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0 /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors/CMakeFiles/distancecolor.dir/DependInfo.cmake
Scanning dependencies of target distancecolor
/usr/bin/make -f libavogadro/src/colors/CMakeFiles/distancecolor.dir/build.make libavogadro/src/colors/CMakeFiles/distancecolor.dir/build
/usr/local/bin/cmake -E cmake_progress_report /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/CMakeFiles 51
[ 80%] Building CXX object libavogadro/src/colors/CMakeFiles/distancecolor.dir/distancecolor.cpp.o
cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors && /usr/bin/c++ -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Ddistancecolor_EXPORTS -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fPIC -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/usr/local/include/python2.7 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors -o CMakeFiles/distancecolor.dir/distancecolor.cpp.o -c
/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors/distancecolor.cpp
/usr/local/bin/cmake -E cmake_progress_report /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/CMakeFiles
[ 80%] Building CXX object libavogadro/src/colors/CMakeFiles/distancecolor.dir/moc_distancecolor.cxx.o
cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors && /usr/bin/c++ -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Ddistancecolor_EXPORTS -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fPIC -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/usr/local/include/python2.7 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors -o CMakeFiles/distancecolor.dir/moc_distancecolor.cxx.
o -c /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors/moc_distancecolor.cxx
Linking CXX shared module ../../../lib/distancecolor.so
cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/distancecolor.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -L/usr/local/lib -shared -Wl,-soname,distancecolor.so -o ../../../lib/distancecolor.so CMakeFiles/distancecolor.dir/distancecolor.cpp.o CMakeFiles/distancecolor.dir/moc_distancecolor.cxx.o -L/usr/local/lib ../../../lib/libavogadro.so.1.1.0 /usr/local/lib/qt4/libQtCore.so /usr/local/lib/qt4/libQtGui.so -lopenbabel /usr/local/lib/libGLU.so /usr/local/lib/libGL.so /usr/local/lib/libSM.so /usr/local/lib/libICE.so /usr/local/lib/libX11.so /usr/local/lib/libXext.so -Wl,-rpath,/usr/local/lib:/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/lib:/usr/local/lib/qt4:
/usr/local/bin/cmake -E cmake_progress_report /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/CMakeFiles 51
[ 80%] Built target distancecolor
/usr/bin/make -f libavogadro/src/colors/CMakeFiles/residuecolor.dir/build.make libavogadro/src/colors/CMakeFiles/residuecolor.dir/depend
/usr/local/bin/cmake -E cmake_progress_report /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/CMakeFiles
[ 80%] Generating moc_residuecolor.cxx
cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors && /usr/local/bin/moc-qt4 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/include -I/usr/local/include/qt4 -I/usr/local/include/qt4/QtOpenGL -I/usr/local/include/qt4/QtGui -I/usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/usr/local/include/python2.7 -I/usr/local/include/qt4 -I/usr/local/include/qt4/QtOpenGL -I/usr/local/include/qt4/QtGui -I/usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors -D_BSD_SOURCE -DHAVE_GCC_VISIBILITY -DENABLE_PYTHON -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_PLUGIN -DQT_SHARED -DBOOST_TT_HAS_OPERATOR_HPP_INCLUDED -o /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors/moc_residuecolor.
cxx /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors/residuecolor.h
/usr/local/bin/cmake -E cmake_progress_report /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/CMakeFiles
[ 80%] Generating ui_residuecolorsettings.h
cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors && /usr/local/bin/uic-qt4 -o /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors/ui_residuecolorsettings.h /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors/residuecolorsettings.ui
cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0 && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0 /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0 /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors/CMakeFiles/residuecolor.dir/DependInfo.cmake
Scanning dependencies of target residuecolor
/usr/bin/make -f libavogadro/src/colors/CMakeFiles/residuecolor.dir/build.make libavogadro/src/colors/CMakeFiles/residuecolor.dir/build
/usr/local/bin/cmake -E cmake_progress_report /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/CMakeFiles
[ 80%] Building CXX object libavogadro/src/colors/CMakeFiles/residuecolor.dir/residuecolor.cpp.o
cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors && /usr/bin/c++ -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dresiduecolor_EXPORTS -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fPIC -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/usr/local/include/python2.7 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors -o CMakeFiles/residuecolor.dir/residuecolor.cpp.o -c /w
rkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors/residuecolor.cpp
/usr/local/bin/cmake -E cmake_progress_report /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/CMakeFiles 83
[ 81%] Building CXX object libavogadro/src/colors/CMakeFiles/residuecolor.dir/moc_residuecolor.cxx.o
cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors && /usr/bin/c++ -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dresiduecolor_EXPORTS -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fPIC -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/usr/local/include/python2.7 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors -o CMakeFiles/residuecolor.dir/moc_residuecolor.cxx.o -
c /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors/moc_residuecolor.cxx
Linking CXX shared module ../../../lib/residuecolor.so
cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/residuecolor.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -L/usr/local/lib -shared -Wl,-soname,residuecolor.so -o ../../../lib/residuecolor.so CMakeFiles/residuecolor.dir/residuecolor.cpp.o CMakeFiles/residuecolor.dir/moc_residuecolor.cxx.o -L/usr/local/lib ../../../lib/libavogadro.so.1.1.0 /usr/local/lib/qt4/libQtCore.so /usr/local/lib/qt4/libQtGui.so -lopenbabel /usr/local/lib/libGLU.so /usr/local/lib/libGL.so /usr/local/lib/libSM.so /usr/local/lib/libICE.so /usr/local/lib/libX11.so /usr/local/lib/libXext.so -Wl,-rpath,/usr/local/lib:/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/lib:/usr/local/lib/qt4:
/usr/local/bin/cmake -E cmake_progress_report /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/CMakeFiles 83
[ 81%] Built target residuecolor
/usr/bin/make -f libavogadro/src/colors/CMakeFiles/smartscolor.dir/build.make libavogadro/src/colors/CMakeFiles/smartscolor.dir/depend
/usr/local/bin/cmake -E cmake_progress_report /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/CMakeFiles
[ 81%] Generating moc_smartscolor.cxx
cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors && /usr/local/bin/moc-qt4 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/include -I/usr/local/include/qt4 -I/usr/local/include/qt4/QtOpenGL -I/usr/local/include/qt4/QtGui -I/usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/usr/local/include/python2.7 -I/usr/local/include/qt4 -I/usr/local/include/qt4/QtOpenGL -I/usr/local/include/qt4/QtGui -I/usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors -D_BSD_SOURCE -DHAVE_GCC_VISIBILITY -DENABLE_PYTHON -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_PLUGIN -DQT_SHARED -DBOOST_TT_HAS_OPERATOR_HPP_INCLUDED -o /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors/moc_smartscolor.c
xx /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors/smartscolor.h
cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0 && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0 /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0 /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors/CMakeFiles/smartscolor.dir/DependInfo.cmake
Scanning dependencies of target smartscolor
/usr/bin/make -f libavogadro/src/colors/CMakeFiles/smartscolor.dir/build.make libavogadro/src/colors/CMakeFiles/smartscolor.dir/build
/usr/local/bin/cmake -E cmake_progress_report /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/CMakeFiles
[ 81%] Building CXX object libavogadro/src/colors/CMakeFiles/smartscolor.dir/smartscolor.cpp.o
cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors && /usr/bin/c++ -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dsmartscolor_EXPORTS -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fPIC -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/usr/local/include/python2.7 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors -o CMakeFiles/smartscolor.dir/smartscolor.cpp.o -c /wrkd
irs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors/smartscolor.cpp
/usr/local/bin/cmake -E cmake_progress_report /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/CMakeFiles
[ 81%] Building CXX object libavogadro/src/colors/CMakeFiles/smartscolor.dir/moc_smartscolor.cxx.o
cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors && /usr/bin/c++ -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dsmartscolor_EXPORTS -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fPIC -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/usr/local/include/python2.7 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors -o CMakeFiles/smartscolor.dir/moc_smartscolor.cxx.o -c /
wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors/moc_smartscolor.cxx
Linking CXX shared module ../../../lib/smartscolor.so
cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/colors && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/smartscolor.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -L/usr/local/lib -shared -Wl,-soname,smartscolor.so -o ../../../lib/smartscolor.so CMakeFiles/smartscolor.dir/smartscolor.cpp.o CMakeFiles/smartscolor.dir/moc_smartscolor.cxx.o -L/usr/local/lib ../../../lib/libavogadro.so.1.1.0 /usr/local/lib/qt4/libQtCore.so /usr/local/lib/qt4/libQtGui.so -lopenbabel /usr/local/lib/libGLU.so /usr/local/lib/libGL.so /usr/local/lib/libSM.so /usr/local/lib/libICE.so /usr/local/lib/libX11.so /usr/local/lib/libXext.so -Wl,-rpath,/usr/local/lib:/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/lib:/usr/local/lib/qt4:
/usr/local/bin/cmake -E cmake_progress_report /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/CMakeFiles
[ 81%] Built target smartscolor
/usr/bin/make -f libavogadro/src/python/CMakeFiles/python-module.dir/build.make libavogadro/src/python/CMakeFiles/python-module.dir/depend
/usr/local/bin/cmake -E cmake_progress_report /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/CMakeFiles
[ 81%] Generating moleculelist.moc
cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/python && /usr/local/bin/moc-qt4 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/include -I/usr/local/include/qt4 -I/usr/local/include/qt4/QtOpenGL -I/usr/local/include/qt4/QtGui -I/usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/usr/local/include/python2.7 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/include -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/python -I/usr/local/include/openbabel-2.0 -I/usr/local/include/python2.7 -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -D_BSD_SOURCE -DHAVE_GCC_VISIBILITY -DENABLE_PYTHON -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -o /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/python/molecule
list.moc /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/python/moleculelist.h
cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0 && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0 /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/python /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0 /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/python /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/python/CMakeFiles/python-module.dir/DependInfo.cmake
Scanning dependencies of target python-module
/usr/bin/make -f libavogadro/src/python/CMakeFiles/python-module.dir/build.make libavogadro/src/python/CMakeFiles/python-module.dir/build
/usr/local/bin/cmake -E cmake_progress_report /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/CMakeFiles
[ 81%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/cube.cpp.o
cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/python && /usr/bin/c++ -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Dpython_module_EXPORTS -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fPIC -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/usr/local/include/python2.7 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/python -I/usr/local/lib/python2.7/site-packages/numpy/core/include -o CMakeFiles/pyth
on-module.dir/cube.cpp.o -c /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/python/cube.cpp
/usr/local/bin/cmake -E cmake_progress_report /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/CMakeFiles
[ 81%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/std_vector.cpp.o
cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/python && /usr/bin/c++ -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Dpython_module_EXPORTS -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fPIC -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/usr/local/include/python2.7 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/python -I/usr/local/lib/python2.7/site-packages/numpy/core/include -o CMakeFiles/pyth
on-module.dir/std_vector.cpp.o -c /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/python/std_vector.cpp
/usr/local/bin/cmake -E cmake_progress_report /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/CMakeFiles 76
[ 82%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/tool.cpp.o
cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/python && /usr/bin/c++ -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Dpython_module_EXPORTS -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing -fPIC -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/usr/local/include -I/usr/local/include/python2.7 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/python -I/usr/local/lib/python2.7/site-packages/numpy/core/include -o CMakeFiles/pyth
on-module.dir/tool.cpp.o -c /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/python/tool.cpp
c++: Internal error: Killed: 9 (program cc1plus)
Please submit a full bug report.
See <URL:http://gcc.gnu.org/bugs.html> for instructions.
*** Error code 1
Stop in /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0.
*** Error code 1
Stop in /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0.
*** Error code 1
Stop in /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0.
*** Error code 1
Stop in /usr/ports/science/avogadro.
===> Cleaning for avogadro-1.1.0
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