misc/112717: Updating math/R 2.4.1 to version 2.5.0
Vittorio De Martino
vdemart1 at tin.it
Wed May 16 14:50:02 UTC 2007
>Number: 112717
>Category: misc
>Synopsis: Updating math/R 2.4.1 to version 2.5.0
>Confidential: no
>Severity: non-critical
>Priority: low
>Responsible: freebsd-bugs
>State: open
>Quarter:
>Keywords:
>Date-Required:
>Class: change-request
>Submitter-Id: current-users
>Arrival-Date: Wed May 16 14:50:01 GMT 2007
>Closed-Date:
>Last-Modified:
>Originator: Vittorio De Martino
>Release: 6.2
>Organization:
>Environment:
FreeBSD NbBSD.grtn 6.2-RELEASE-p4 FreeBSD 6.2-RELEASE-p4 #0: Mon May 7 21:47:32 UTC 2007 root at NbBSD.grtn:/usr/obj/usr/src/sys/LAPTOP10 i386
>Description:
I'm attaching the diff file to update from 2.4.1 to 2.5.0 of math/R
>How-To-Repeat:
--
>Fix:
See below the diff file
Patch attached with submission follows:
diff -ruN R-old/Makefile R/Makefile
--- R-old/Makefile Wed May 16 13:40:13 2007
+++ R/Makefile Wed May 16 13:44:47 2007
@@ -7,7 +7,7 @@
#
PORTNAME= R
-PORTVERSION= 2.4.1
+PORTVERSION= 2.5.0
CATEGORIES= math lang
MASTER_SITES= http://cran.r-project.org/src/base/R-2/ \
ftp://cran.r-project.org/pub/R/src/base/R-2/ \
diff -ruN R-old/distinfo R/distinfo
--- R-old/distinfo Wed May 16 13:40:13 2007
+++ R/distinfo Wed May 16 13:44:56 2007
@@ -1,3 +1,3 @@
-MD5 (R-2.4.1.tar.gz) = 92b33fd2c3e770d595c1a472889230d5
-SHA256 (R-2.4.1.tar.gz) = 4ff92cfd29064db59978ef11c95dd88a4040ed4984fdce29fcb5d5783fe9028b
-SIZE (R-2.4.1.tar.gz) = 14570344
+MD5 (R-2.5.0.tar.gz) = b9088663fc539c059acfaf19d6d90a69
+SHA256 (R-2.5.0.tar.gz) = 52504c7700f8f880891b34622f73a41dde66e0752a8552d2b8df5c85756a8eef
+SIZE (R-2.5.0.tar.gz) = 15117375
diff -ruN R-old/pkg-plist R/pkg-plist
--- R-old/pkg-plist Wed May 16 15:16:28 2007
+++ R/pkg-plist Wed May 16 14:57:49 2007
@@ -1,4 +1,14 @@
bin/R
+bin/Rscript
+info/R-FAQ.info
+info/R-admin.info
+info/R-data.info
+info/R-exts.info
+info/R-exts.info-1
+info/R-exts.info-2
+info/R-intro.info
+info/R-lang.info
+info/dir
lib/R/COPYING
lib/R/NEWS
lib/R/SVN-REVISION
@@ -14,6 +24,7 @@
lib/R/bin/Rdconv
lib/R/bin/Rdiff
lib/R/bin/Rprof
+lib/R/bin/Rscript
lib/R/bin/SHLIB
lib/R/bin/Sd2Rd
lib/R/bin/Stangle
@@ -62,6 +73,8 @@
lib/R/include/R_ext/eventloop.h
lib/R/include/R_ext/libextern.h
lib/R/include/R_ext/rlocale.h
+lib/R/include/R_ext/stats_package.h
+lib/R/include/R_ext/stats_stubs.h
lib/R/include/Rconfig.h
lib/R/include/Rdefines.h
lib/R/include/Rdevices.h
@@ -73,7 +86,7 @@
lib/R/include/Rversion.h
lib/R/include/S.h
lib/R/lib/libR.so
-%%BLAS%%lib/R/lib/libRlapack.so
+lib/R/lib/libRlapack.so
lib/R/library/KernSmooth/CONTENTS
lib/R/library/KernSmooth/DESCRIPTION
lib/R/library/KernSmooth/INDEX
@@ -186,7 +199,8 @@
lib/R/library/MASS/R-ex/nlschools.R
lib/R/library/MASS/R-ex/npk.R
lib/R/library/MASS/R-ex/oats.R
-lib/R/library/MASS/R-ex/parcoord.lib/R/library/MASS/R-ex/petrol.R
+lib/R/library/MASS/R-ex/parcoord.R
+lib/R/library/MASS/R-ex/petrol.R
lib/R/library/MASS/R-ex/plot.mca.R
lib/R/library/MASS/R-ex/polr.R
lib/R/library/MASS/R-ex/predict.glmmPQL.R
@@ -717,6 +731,7 @@
lib/R/library/base/R-ex/Cstack_info.R
lib/R/library/base/R-ex/DateTimeClasses.R
lib/R/library/base/R-ex/Dates.R
+lib/R/library/base/R-ex/Encoding.R
lib/R/library/base/R-ex/Extract.R
lib/R/library/base/R-ex/Extract.data.frame.R
lib/R/library/base/R-ex/Extract.factor.R
@@ -728,6 +743,7 @@
lib/R/library/base/R-ex/Memory.R
lib/R/library/base/R-ex/NA.R
lib/R/library/base/R-ex/NULL.R
+lib/R/library/base/R-ex/NumericConstants.R
lib/R/library/base/R-ex/Ops.Date.R
lib/R/library/base/R-ex/Paren.R
lib/R/library/base/R-ex/Platform.R
@@ -738,7 +754,12 @@
lib/R/library/base/R-ex/Round.R
lib/R/library/base/R-ex/Special.R
lib/R/library/base/R-ex/Startup.R
+lib/R/library/base/R-ex/Sys.getenv.R
+lib/R/library/base/R-ex/Sys.getpid.R
+lib/R/library/base/R-ex/Sys.glob.R
lib/R/library/base/R-ex/Sys.info.R
+lib/R/library/base/R-ex/Sys.localeconv.R
+lib/R/library/base/R-ex/Sys.setenv.R
lib/R/library/base/R-ex/Sys.sleep.R
lib/R/library/base/R-ex/Sys.time.R
lib/R/library/base/R-ex/Version.R
@@ -769,6 +790,7 @@
lib/R/library/base/R-ex/by.R
lib/R/library/base/R-ex/c.R
lib/R/library/base/R-ex/call.R
+lib/R/library/base/R-ex/callCC.R
lib/R/library/base/R-ex/capabilities.R
lib/R/library/base/R-ex/cat.R
lib/R/library/base/R-ex/cbind.R
@@ -789,7 +811,6 @@
lib/R/library/base/R-ex/conflicts.R
lib/R/library/base/R-ex/connections.R
lib/R/library/base/R-ex/converters.R
-lib/R/library/base/R-ex/count.fields.R
lib/R/library/base/R-ex/crossprod.R
lib/R/library/base/R-ex/cumsum.R
lib/R/library/base/R-ex/cut.POSIXt.R
@@ -845,8 +866,6 @@
lib/R/library/base/R-ex/getDLLRegisteredRoutines.R
lib/R/library/base/R-ex/getLoadedDLLs.R
lib/R/library/base/R-ex/getNativeSymbolInfo.R
-lib/R/library/base/R-ex/getenv.R
-lib/R/library/base/R-ex/getpid.R
lib/R/library/base/R-ex/gettext.R
lib/R/library/base/R-ex/getwd.R
lib/R/library/base/R-ex/gl.R
@@ -881,7 +900,6 @@
lib/R/library/base/R-ex/list.R
lib/R/library/base/R-ex/list.files.R
lib/R/library/base/R-ex/load.R
-lib/R/library/base/R-ex/localeconv.R
lib/R/library/base/R-ex/locales.R
lib/R/library/base/R-ex/lower.tri.R
lib/R/library/base/R-ex/ls.R
@@ -936,7 +954,6 @@
lib/R/library/base/R-ex/prod.R
lib/R/library/base/R-ex/prop.table.R
lib/R/library/base/R-ex/pushBack.R
-lib/R/library/base/R-ex/putenv.R
lib/R/library/base/R-ex/qr.R
lib/R/library/base/R-ex/qraux.R
lib/R/library/base/R-ex/quit.R
@@ -980,7 +997,7 @@
lib/R/library/base/R-ex/source.R
lib/R/library/base/R-ex/split.R
lib/R/library/base/R-ex/sprintf.R
-lib/R/library/base/R-ex/stack.R
+lib/R/library/base/R-ex/srcfile.R
lib/R/library/base/R-ex/stop.R
lib/R/library/base/R-ex/stopifnot.R
lib/R/library/base/R-ex/strptime.R
@@ -996,6 +1013,7 @@
lib/R/library/base/R-ex/sweep.R
lib/R/library/base/R-ex/switch.R
lib/R/library/base/R-ex/sys.parent.R
+lib/R/library/base/R-ex/sys.source.R
lib/R/library/base/R-ex/system.R
lib/R/library/base/R-ex/system.file.R
lib/R/library/base/R-ex/system.time.R
@@ -1011,6 +1029,7 @@
lib/R/library/base/R-ex/toString.R
lib/R/library/base/R-ex/trace.R
lib/R/library/base/R-ex/traceback.R
+lib/R/library/base/R-ex/tracemem.R
lib/R/library/base/R-ex/transform.R
lib/R/library/base/R-ex/try.R
lib/R/library/base/R-ex/typeof.R
@@ -1026,7 +1045,6 @@
lib/R/library/base/R-ex/which.min.R
lib/R/library/base/R-ex/with.R
lib/R/library/base/R-ex/write.R
-lib/R/library/base/R-ex/write.table.R
lib/R/library/base/R-ex/zMachine.R
lib/R/library/base/R-ex/zScript.R
lib/R/library/base/R-ex/zpackages.R
@@ -1050,6 +1068,7 @@
lib/R/library/base/help/Dates
lib/R/library/base/help/Defunct
lib/R/library/base/help/Deprecated
+lib/R/library/base/help/Encoding
lib/R/library/base/help/Extract
lib/R/library/base/help/Extract.data.frame
lib/R/library/base/help/Extract.factor
@@ -1081,7 +1100,12 @@
lib/R/library/base/help/Special
lib/R/library/base/help/Startup
lib/R/library/base/help/Syntax
+lib/R/library/base/help/Sys.getenv
+lib/R/library/base/help/Sys.getpid
+lib/R/library/base/help/Sys.glob
lib/R/library/base/help/Sys.info
+lib/R/library/base/help/Sys.localeconv
+lib/R/library/base/help/Sys.setenv
lib/R/library/base/help/Sys.sleep
lib/R/library/base/help/Sys.time
lib/R/library/base/help/Trig
@@ -1122,6 +1146,7 @@
lib/R/library/base/help/by
lib/R/library/base/help/c
lib/R/library/base/help/call
+lib/R/library/base/help/callCC
lib/R/library/base/help/capabilities
lib/R/library/base/help/cat
lib/R/library/base/help/cbind
@@ -1144,7 +1169,6 @@
lib/R/library/base/help/contributors
lib/R/library/base/help/converters
lib/R/library/base/help/copyright
-lib/R/library/base/help/count.fields
lib/R/library/base/help/crossprod
lib/R/library/base/help/cumsum
lib/R/library/base/help/cut
@@ -1207,8 +1231,6 @@
lib/R/library/base/help/getDLLRegisteredRoutines
lib/R/library/base/help/getLoadedDLLs
lib/R/library/base/help/getNativeSymbolInfo
-lib/R/library/base/help/getenv
-lib/R/library/base/help/getpid
lib/R/library/base/help/gettext
lib/R/library/base/help/getwd
lib/R/library/base/help/gl
@@ -1248,7 +1270,6 @@
lib/R/library/base/help/list
lib/R/library/base/help/list.files
lib/R/library/base/help/load
-lib/R/library/base/help/localeconv
lib/R/library/base/help/locales
lib/R/library/base/help/logical
lib/R/library/base/help/lower.tri
@@ -1310,7 +1331,6 @@
lib/R/library/base/help/prod
lib/R/library/base/help/prop.table
lib/R/library/base/help/pushBack
-lib/R/library/base/help/putenv
lib/R/library/base/help/qr
lib/R/library/base/help/qraux
lib/R/library/base/help/quit
@@ -1319,7 +1339,6 @@
lib/R/library/base/help/rapply
lib/R/library/base/help/raw
lib/R/library/base/help/rawConversion
-lib/R/library/base/help/read.table
lib/R/library/base/help/readBin
lib/R/library/base/help/readChar
lib/R/library/base/help/readLines
@@ -1361,7 +1380,7 @@
lib/R/library/base/help/source
lib/R/library/base/help/split
lib/R/library/base/help/sprintf
-lib/R/library/base/help/stack
+lib/R/library/base/help/srcfile
lib/R/library/base/help/standardGeneric
lib/R/library/base/help/stop
lib/R/library/base/help/stopifnot
@@ -1396,9 +1415,9 @@
lib/R/library/base/help/toString
lib/R/library/base/help/trace
lib/R/library/base/help/traceback
+lib/R/library/base/help/tracemem
lib/R/library/base/help/transform
lib/R/library/base/help/try
-lib/R/library/base/help/type.convert
lib/R/library/base/help/typeof
lib/R/library/base/help/unique
lib/R/library/base/help/unlink
@@ -1414,12 +1433,10 @@
lib/R/library/base/help/which.min
lib/R/library/base/help/with
lib/R/library/base/help/write
-lib/R/library/base/help/write.table
lib/R/library/base/help/writeLines
lib/R/library/base/help/zMachine
lib/R/library/base/help/zMethods
lib/R/library/base/help/zScript
-lib/R/library/base/help/zip.file.extract
lib/R/library/base/help/zpackages
lib/R/library/base/help/zutils
lib/R/library/base/html/00Index.html
@@ -1435,6 +1452,7 @@
lib/R/library/base/html/Dates.html
lib/R/library/base/html/Defunct.html
lib/R/library/base/html/Deprecated.html
+lib/R/library/base/html/Encoding.html
lib/R/library/base/html/Extract.data.frame.html
lib/R/library/base/html/Extract.factor.html
lib/R/library/base/html/Extract.html
@@ -1466,7 +1484,12 @@
lib/R/library/base/html/Special.html
lib/R/library/base/html/Startup.html
lib/R/library/base/html/Syntax.html
+lib/R/library/base/html/Sys.getenv.html
+lib/R/library/base/html/Sys.getpid.html
+lib/R/library/base/html/Sys.glob.html
lib/R/library/base/html/Sys.info.html
+lib/R/library/base/html/Sys.localeconv.html
+lib/R/library/base/html/Sys.setenv.html
lib/R/library/base/html/Sys.sleep.html
lib/R/library/base/html/Sys.time.html
lib/R/library/base/html/Trig.html
@@ -1507,6 +1530,7 @@
lib/R/library/base/html/by.html
lib/R/library/base/html/c.html
lib/R/library/base/html/call.html
+lib/R/library/base/html/callCC.html
lib/R/library/base/html/capabilities.html
lib/R/library/base/html/cat.html
lib/R/library/base/html/cbind.html
@@ -1529,7 +1553,6 @@
lib/R/library/base/html/contributors.html
lib/R/library/base/html/converters.html
lib/R/library/base/html/copyright.html
-lib/R/library/base/html/count.fields.html
lib/R/library/base/html/crossprod.html
lib/R/library/base/html/cumsum.html
lib/R/library/base/html/cut.POSIXt.html
@@ -1592,8 +1615,6 @@
lib/R/library/base/html/getDLLRegisteredRoutines.html
lib/R/library/base/html/getLoadedDLLs.html
lib/R/library/base/html/getNativeSymbolInfo.html
-lib/R/library/base/html/getenv.html
-lib/R/library/base/html/getpid.html
lib/R/library/base/html/gettext.html
lib/R/library/base/html/getwd.html
lib/R/library/base/html/gl.html
@@ -1633,7 +1654,6 @@
lib/R/library/base/html/list.files.html
lib/R/library/base/html/list.html
lib/R/library/base/html/load.html
-lib/R/library/base/html/localeconv.html
lib/R/library/base/html/locales.html
lib/R/library/base/html/logical.html
lib/R/library/base/html/lower.tri.html
@@ -1695,7 +1715,6 @@
lib/R/library/base/html/prod.html
lib/R/library/base/html/prop.table.html
lib/R/library/base/html/pushBack.html
-lib/R/library/base/html/putenv.html
lib/R/library/base/html/qr.html
lib/R/library/base/html/qraux.html
lib/R/library/base/html/quit.html
@@ -1704,7 +1723,6 @@
lib/R/library/base/html/rapply.html
lib/R/library/base/html/raw.html
lib/R/library/base/html/rawConversion.html
-lib/R/library/base/html/read.table.html
lib/R/library/base/html/readBin.html
lib/R/library/base/html/readChar.html
lib/R/library/base/html/readLines.html
@@ -1746,7 +1764,7 @@
lib/R/library/base/html/source.html
lib/R/library/base/html/split.html
lib/R/library/base/html/sprintf.html
-lib/R/library/base/html/stack.html
+lib/R/library/base/html/srcfile.html
lib/R/library/base/html/standardGeneric.html
lib/R/library/base/html/stop.html
lib/R/library/base/html/stopifnot.html
@@ -1781,9 +1799,9 @@
lib/R/library/base/html/toString.html
lib/R/library/base/html/trace.html
lib/R/library/base/html/traceback.html
+lib/R/library/base/html/tracemem.html
lib/R/library/base/html/transform.html
lib/R/library/base/html/try.html
-lib/R/library/base/html/type.convert.html
lib/R/library/base/html/typeof.html
lib/R/library/base/html/unique.html
lib/R/library/base/html/unlink.html
@@ -1799,12 +1817,10 @@
lib/R/library/base/html/which.min.html
lib/R/library/base/html/with.html
lib/R/library/base/html/write.html
-lib/R/library/base/html/write.table.html
lib/R/library/base/html/writeLines.html
-lib/R/library/base/html/zMachine.html
+5~5~5~5~5~5~5~lib/R/library/base/html/zMachine.html
lib/R/library/base/html/zMethods.html
lib/R/library/base/html/zScript.html
-lib/R/library/base/html/zip.file.extract.html
lib/R/library/base/html/zpackages.html
lib/R/library/base/html/zutils.html
lib/R/library/base/latex/Arithmetic.tex
@@ -1819,6 +1835,7 @@
lib/R/library/base/latex/Dates.tex
lib/R/library/base/latex/Defunct.tex
lib/R/library/base/latex/Deprecated.tex
+lib/R/library/base/latex/Encoding.tex
lib/R/library/base/latex/Extract.data.frame.tex
lib/R/library/base/latex/Extract.factor.tex
lib/R/library/base/latex/Extract.tex
@@ -1850,7 +1867,12 @@
lib/R/library/base/latex/Special.tex
lib/R/library/base/latex/Startup.tex
lib/R/library/base/latex/Syntax.tex
+lib/R/library/base/latex/Sys.getenv.tex
+lib/R/library/base/latex/Sys.getpid.tex
+lib/R/library/base/latex/Sys.glob.tex
lib/R/library/base/latex/Sys.info.tex
+lib/R/library/base/latex/Sys.localeconv.tex
+lib/R/library/base/latex/Sys.setenv.tex
lib/R/library/base/latex/Sys.sleep.tex
lib/R/library/base/latex/Sys.time.tex
lib/R/library/base/latex/Trig.tex
@@ -1891,6 +1913,7 @@
lib/R/library/base/latex/by.tex
lib/R/library/base/latex/c.tex
lib/R/library/base/latex/call.tex
+lib/R/library/base/latex/callCC.tex
lib/R/library/base/latex/capabilities.tex
lib/R/library/base/latex/cat.tex
lib/R/library/base/latex/cbind.tex
@@ -1913,7 +1936,6 @@
lib/R/library/base/latex/contributors.tex
lib/R/library/base/latex/converters.tex
lib/R/library/base/latex/copyright.tex
-lib/R/library/base/latex/count.fields.tex
lib/R/library/base/latex/crossprod.tex
lib/R/library/base/latex/cumsum.tex
lib/R/library/base/latex/cut.POSIXt.tex
@@ -1976,8 +1998,6 @@
lib/R/library/base/latex/getDLLRegisteredRoutines.tex
lib/R/library/base/latex/getLoadedDLLs.tex
lib/R/library/base/latex/getNativeSymbolInfo.tex
-lib/R/library/base/latex/getenv.tex
-lib/R/library/base/latex/getpid.tex
lib/R/library/base/latex/gettext.tex
lib/R/library/base/latex/getwd.tex
lib/R/library/base/latex/gl.tex
@@ -2017,7 +2037,6 @@
lib/R/library/base/latex/list.files.tex
lib/R/library/base/latex/list.tex
lib/R/library/base/latex/load.tex
-lib/R/library/base/latex/localeconv.tex
lib/R/library/base/latex/locales.tex
lib/R/library/base/latex/logical.tex
lib/R/library/base/latex/lower.tri.tex
@@ -2079,7 +2098,6 @@
lib/R/library/base/latex/prod.tex
lib/R/library/base/latex/prop.table.tex
lib/R/library/base/latex/pushBack.tex
-lib/R/library/base/latex/putenv.tex
lib/R/library/base/latex/qr.tex
lib/R/library/base/latex/qraux.tex
lib/R/library/base/latex/quit.tex
@@ -2088,7 +2106,6 @@
lib/R/library/base/latex/rapply.tex
lib/R/library/base/latex/raw.tex
lib/R/library/base/latex/rawConversion.tex
-lib/R/library/base/latex/read.table.tex
lib/R/library/base/latex/readBin.tex
lib/R/library/base/latex/readChar.tex
lib/R/library/base/latex/readLines.tex
@@ -2130,7 +2147,7 @@
lib/R/library/base/latex/source.tex
lib/R/library/base/latex/split.tex
lib/R/library/base/latex/sprintf.tex
-lib/R/library/base/latex/stack.tex
+lib/R/library/base/latex/srcfile.tex
lib/R/library/base/latex/standardGeneric.tex
lib/R/library/base/latex/stop.tex
lib/R/library/base/latex/stopifnot.tex
@@ -2165,9 +2182,9 @@
lib/R/library/base/latex/toString.tex
lib/R/library/base/latex/trace.tex
lib/R/library/base/latex/traceback.tex
+lib/R/library/base/latex/tracemem.tex
lib/R/library/base/latex/transform.tex
lib/R/library/base/latex/try.tex
-lib/R/library/base/latex/type.convert.tex
lib/R/library/base/latex/typeof.tex
lib/R/library/base/latex/unique.tex
lib/R/library/base/latex/unlink.tex
@@ -2182,13 +2199,11 @@
lib/R/library/base/latex/which.min.tex
lib/R/library/base/latex/which.tex
lib/R/library/base/latex/with.tex
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lib/R/library/cluster/R-ex/fanny.R
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lib/R/library/cluster/help/dissimilarity.object
lib/R/library/cluster/help/ellipsoidhull
lib/R/library/cluster/help/fanny
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lib/R/library/cluster/html/daisy.html
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lib/R/library/cluster/html/dissimilarity.object.html
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lib/R/library/datasets/R-ex/chickwts.R
lib/R/library/datasets/R-ex/co2.R
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lib/R/library/datasets/R-ex/discoveries.R
lib/R/library/datasets/R-ex/esoph.R
lib/R/library/datasets/R-ex/euro.R
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lib/R/library/datasets/help/chickwts
lib/R/library/datasets/help/co2
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lib/R/library/datasets/help/discoveries
lib/R/library/datasets/help/esoph
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lib/R/library/datasets/html/chickwts.html
lib/R/library/datasets/html/co2.html
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lib/R/library/datasets/html/discoveries.html
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lib/R/library/datasets/latex/chickwts.tex
lib/R/library/datasets/latex/co2.tex
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lib/R/library/foreign/help/write.foreign
lib/R/library/foreign/html/00Index.html
lib/R/library/foreign/html/lookup.xport.html
lib/R/library/foreign/html/read.S.html
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lib/R/library/foreign/html/read.systat.html
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lib/R/library/foreign/html/write.foreign.html
lib/R/library/foreign/latex/lookup.xport.tex
lib/R/library/foreign/latex/read.S.tex
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lib/R/library/grDevices/R-ex/pdf.R
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lib/R/library/grDevices/help/Japanese
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lib/R/library/grDevices/help/check.options
lib/R/library/grDevices/help/chull
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lib/R/library/grDevices/html/Japanese.html
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lib/R/library/lattice/COPYING
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lib/R/library/lattice/help/panel.violin
lib/R/library/lattice/help/panel.xyplot
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lib/R/library/lattice/help/print.trellis
lib/R/library/lattice/help/qq
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lib/R/library/lattice/html/panel.violin.html
lib/R/library/lattice/html/panel.xyplot.html
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lib/R/library/lattice/html/prepanel.functions.html
lib/R/library/lattice/html/print.trellis.html
lib/R/library/lattice/html/qq.html
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lib/R/library/lattice/latex/panel.violin.tex
lib/R/library/lattice/latex/panel.xyplot.tex
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lib/R/library/lattice/latex/prepanel.functions.tex
lib/R/library/lattice/latex/print.trellis.tex
lib/R/library/lattice/latex/qq.tex
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lib/R/library/methods/R-ex/isSealedMethod.R
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lib/R/library/methods/R-ex/promptClass.R
lib/R/library/methods/R-ex/representation.R
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lib/R/library/methods/help/methods-package
lib/R/library/methods/help/new
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lib/R/library/methods/html/methods-package.html
lib/R/library/methods/html/new.html
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lib/R/library/methods/latex/languageEl.tex
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lib/R/library/methods/po/pt_BR/LC_MESSAGES/R-methods.mo
lib/R/library/methods/po/pt_BR/LC_MESSAGES/methods.mo
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lib/R/library/mgcv/CONTENTS
lib/R/library/mgcv/DESCRIPTION
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lib/R/library/rpart/CONTENTS
lib/R/library/rpart/DESCRIPTION
lib/R/library/rpart/INDEX
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lib/R/library/stats/CONTENTS
lib/R/library/stats/COPYRIGHTS.modreg
lib/R/library/stats/DESCRIPTION
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lib/R/library/stats/po/ru/LC_MESSAGES/stats.mo
lib/R/library/stats/po/zh_CN/LC_MESSAGES/R-stats.mo
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lib/R/library/stats4/CONTENTS
lib/R/library/stats4/DESCRIPTION
lib/R/library/stats4/INDEX
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lib/R/library/survival/CONTENTS
lib/R/library/survival/COPYING
lib/R/library/survival/DESCRIPTION
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lib/R/library/survival/R-ex/survdiff.R
lib/R/library/survival/R-ex/survexp.R
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lib/R/library/survival/R-ex/survobrien.R
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lib/R/library/tcltk/Meta/package.rds
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lib/R/library/tcltk/R-ex/TclInterface.R
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lib/R/library/tcltk/R-ex/TkWidgetcmds.R
lib/R/library/tcltk/R-ex/TkWidgets.R
lib/R/library/tcltk/R-ex/tclServiceMode.R
lib/R/library/tcltk/R/tcltk
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lib/R/library/tcltk/demo/tkcanvas.R
lib/R/library/tcltk/demo/tkdensity.R
lib/R/library/tcltk/demo/tkfaq.R
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lib/R/library/tcltk/latex/tkStartGUI.tex
lib/R/library/tcltk/latex/tk_select.list.tex
lib/R/library/tcltk/latex/tkpager.tex
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lib/R/library/tcltk/man/tcltk.Rd.gz
lib/R/library/tcltk/po/en at quot/LC_MESSAGES/R-tcltk.mo
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lib/R/library/tcltk/po/it/LC_MESSAGES/R-tcltk.mo
lib/R/library/tcltk/po/ja/LC_MESSAGES/R-tcltk.mo
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lib/R/library/tcltk/po/ko/LC_MESSAGES/R-tcltk.mo
lib/R/library/tcltk/po/pt_BR/LC_MESSAGES/R-tcltk.mo
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lib/R/library/tools/CONTENTS
lib/R/library/tools/DESCRIPTION
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lib/R/library/tools/po/ru/LC_MESSAGES/R-tools.mo
lib/R/library/tools/po/ru/LC_MESSAGES/tools.mo
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lib/R/library/utils/CONTENTS
lib/R/library/utils/DESCRIPTION
lib/R/library/utils/INDEX
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lib/R/library/utils/Meta/package.rds
lib/R/library/utils/NAMESPACE
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lib/R/library/utils/R-ex/RSiteSearch.R
lib/R/library/utils/R-ex/Rprof.R
lib/R/library/utils/R-ex/Rprofmem.R
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lib/R/library/utils/R-ex/SHLIB.R
lib/R/library/utils/R-ex/Sweave.R
lib/R/library/utils/R-ex/SweaveSyntConv.R
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lib/R/library/utils/R-ex/citation.R
lib/R/library/utils/R-ex/combn.R
lib/R/library/utils/R-ex/compareVersion.R
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lib/R/library/utils/R-ex/data.R
lib/R/library/utils/R-ex/dataentry.R
lib/R/library/utils/R-ex/debugger.R
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lib/R/library/utils/R-ex/edit.data.frame.R
lib/R/library/utils/R-ex/example.R
lib/R/library/utils/R-ex/file.edit.R
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lib/R/library/utils/R-ex/fix.R
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lib/R/library/utils/R-ex/getAnywhere.R
lib/R/library/utils/R-ex/getFromNamespace.R
lib/R/library/utils/R-ex/getS3method.R
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lib/R/library/utils/R-ex/read.socket.R
lib/R/library/utils/R-ex/readNEWS.R
lib/R/library/utils/R-ex/recover.R
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lib/R/library/utils/R-ex/savehistory.R
lib/R/library/utils/R-ex/select.list.R
lib/R/library/utils/R-ex/sessionInfo.R
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lib/R/library/utils/R-ex/str.R
lib/R/library/utils/R-ex/summaryRprof.R
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lib/R/library/utils/R-ex/update.packages.R
lib/R/library/utils/R-ex/url.show.R
lib/R/library/utils/R-ex/vignette.R
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lib/R/library/utils/R/utils
lib/R/library/utils/R/utils.rdb
lib/R/library/utils/R/utils.rdx
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lib/R/library/utils/help/PkgUtils
lib/R/library/utils/help/REMOVE
lib/R/library/utils/help/RHOME
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lib/R/library/utils/help/RSiteSearch
lib/R/library/utils/help/Rprof
lib/R/library/utils/help/Rprofmem
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lib/R/library/utils/help/Rtangle
lib/R/library/utils/help/RweaveLatex
lib/R/library/utils/help/SHLIB
@@ -8133,6 +8249,7 @@
lib/R/library/utils/help/SweaveSyntConv
lib/R/library/utils/help/SweaveUtils
lib/R/library/utils/help/URLencode
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lib/R/library/utils/help/alarm
lib/R/library/utils/help/apropos
lib/R/library/utils/help/browseEnv
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lib/R/library/utils/help/close.socket
lib/R/library/utils/help/combn
lib/R/library/utils/help/compareVersion
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lib/R/library/utils/help/data
lib/R/library/utils/help/dataentry
lib/R/library/utils/help/debugger
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lib/R/library/utils/help/edit.data.frame
lib/R/library/utils/help/example
lib/R/library/utils/help/file.edit
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lib/R/library/utils/help/fix
lib/R/library/utils/help/flush.console
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lib/R/library/utils/help/getAnywhere
lib/R/library/utils/help/getFromNamespace
lib/R/library/utils/help/getS3method
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lib/R/library/utils/help/read.fortran
lib/R/library/utils/help/read.fwf
lib/R/library/utils/help/read.socket
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lib/R/library/utils/help/readNEWS
lib/R/library/utils/help/recover
lib/R/library/utils/help/remove.packages
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lib/R/library/utils/help/savehistory
lib/R/library/utils/help/select.list
lib/R/library/utils/help/sessionInfo
lib/R/library/utils/help/setRepositories
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lib/R/library/utils/help/str
lib/R/library/utils/help/summaryRprof
lib/R/library/utils/help/toLatex
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lib/R/library/utils/help/update.packages
lib/R/library/utils/help/url.show
lib/R/library/utils/help/utils-defunct
lib/R/library/utils/help/utils-deprecated
lib/R/library/utils/help/utils-package
lib/R/library/utils/help/vignette
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lib/R/library/utils/html/00Index.html
lib/R/library/utils/html/BATCH.html
lib/R/library/utils/html/COMPILE.html
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lib/R/library/utils/html/PkgUtils.html
lib/R/library/utils/html/REMOVE.html
lib/R/library/utils/html/RHOME.html
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lib/R/library/utils/html/RSiteSearch.html
lib/R/library/utils/html/Rprof.html
lib/R/library/utils/html/Rprofmem.html
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lib/R/library/utils/html/Rtangle.html
lib/R/library/utils/html/RweaveLatex.html
lib/R/library/utils/html/SHLIB.html
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lib/R/library/utils/html/SweaveSyntConv.html
lib/R/library/utils/html/SweaveUtils.html
lib/R/library/utils/html/URLencode.html
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lib/R/library/utils/html/alarm.html
lib/R/library/utils/html/apropos.html
lib/R/library/utils/html/browseEnv.html
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lib/R/library/utils/html/close.socket.html
lib/R/library/utils/html/combn.html
lib/R/library/utils/html/compareVersion.html
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lib/R/library/utils/html/data.html
lib/R/library/utils/html/dataentry.html
lib/R/library/utils/html/debugger.html
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lib/R/library/utils/html/edit.html
lib/R/library/utils/html/example.html
lib/R/library/utils/html/file.edit.html
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lib/R/library/utils/html/fix.html
lib/R/library/utils/html/flush.console.html
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lib/R/library/utils/html/getAnywhere.html
lib/R/library/utils/html/getFromNamespace.html
lib/R/library/utils/html/getS3method.html
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lib/R/library/utils/html/read.fortran.html
lib/R/library/utils/html/read.fwf.html
lib/R/library/utils/html/read.socket.html
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lib/R/library/utils/html/readNEWS.html
lib/R/library/utils/html/recover.html
lib/R/library/utils/html/remove.packages.html
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lib/R/library/utils/html/savehistory.html
lib/R/library/utils/html/select.list.html
lib/R/library/utils/html/sessionInfo.html
lib/R/library/utils/html/setRepositories.html
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lib/R/library/utils/html/str.html
lib/R/library/utils/html/summaryRprof.html
lib/R/library/utils/html/toLatex.html
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lib/R/library/utils/html/update.packages.html
lib/R/library/utils/html/url.show.html
lib/R/library/utils/html/utils-defunct.html
lib/R/library/utils/html/utils-deprecated.html
lib/R/library/utils/html/utils-package.html
lib/R/library/utils/html/vignette.html
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lib/R/library/utils/iconvlist
lib/R/library/utils/latex/BATCH.tex
lib/R/library/utils/latex/COMPILE.tex
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lib/R/library/utils/latex/PkgUtils.tex
lib/R/library/utils/latex/REMOVE.tex
lib/R/library/utils/latex/RHOME.tex
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lib/R/library/utils/latex/RSiteSearch.tex
lib/R/library/utils/latex/Rprof.tex
lib/R/library/utils/latex/Rprofmem.tex
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lib/R/library/utils/latex/Rtangle.tex
lib/R/library/utils/latex/RweaveLatex.tex
lib/R/library/utils/latex/SHLIB.tex
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lib/R/library/utils/latex/SweaveSyntConv.tex
lib/R/library/utils/latex/SweaveUtils.tex
lib/R/library/utils/latex/URLencode.tex
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lib/R/library/utils/latex/alarm.tex
lib/R/library/utils/latex/apropos.tex
lib/R/library/utils/latex/browseEnv.tex
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lib/R/library/utils/latex/close.socket.tex
lib/R/library/utils/latex/combn.tex
lib/R/library/utils/latex/compareVersion.tex
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lib/R/library/utils/latex/data.tex
lib/R/library/utils/latex/dataentry.tex
lib/R/library/utils/latex/debugger.tex
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lib/R/library/utils/latex/edit.tex
lib/R/library/utils/latex/example.tex
lib/R/library/utils/latex/file.edit.tex
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lib/R/library/utils/latex/fix.tex
lib/R/library/utils/latex/flush.console.tex
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lib/R/library/utils/latex/getAnywhere.tex
lib/R/library/utils/latex/getFromNamespace.tex
lib/R/library/utils/latex/getS3method.tex
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lib/R/library/utils/latex/read.fortran.tex
lib/R/library/utils/latex/read.fwf.tex
lib/R/library/utils/latex/read.socket.tex
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lib/R/library/utils/latex/readNEWS.tex
lib/R/library/utils/latex/recover.tex
lib/R/library/utils/latex/remove.packages.tex
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lib/R/library/utils/latex/savehistory.tex
lib/R/library/utils/latex/select.list.tex
lib/R/library/utils/latex/sessionInfo.tex
lib/R/library/utils/latex/setRepositories.tex
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lib/R/library/utils/latex/str.tex
lib/R/library/utils/latex/summaryRprof.tex
lib/R/library/utils/latex/toLatex.tex
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lib/R/library/utils/latex/update.packages.tex
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lib/R/library/utils/latex/utils-package.tex
lib/R/library/utils/latex/vignette.tex
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lib/R/library/utils/po/en at quot/LC_MESSAGES/R-utils.mo
lib/R/library/utils/po/fr/LC_MESSAGES/R-utils.mo
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lib/R/library/utils/po/ko/LC_MESSAGES/R-utils.mo
lib/R/library/utils/po/ru/LC_MESSAGES/R-utils.mo
lib/R/library/utils/po/zh_CN/LC_MESSAGES/R-utils.mo
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lib/R/modules/internet.so
lib/R/modules/lapack.so
lib/R/modules/vfonts.so
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+share/man/man1/Rscript.1
+ at dirrm share/nls/en_US.US-ASCII
+ at dirrm share/nls/POSIX
+ at dirrm share/man/man1
+ at dirrm share/man
+ at dirrm share/doc/R/manual
+ at dirrm share/doc/R/html/search
+ at dirrm share/doc/R/html
+ at dirrm share/doc/R
+ at dirrm lib/pkgconfig
@dirrm lib/R/share/texmf
@dirrm lib/R/share/sh
@dirrm lib/R/share/perl/Text
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@dirrm lib/R/library/utils/po/ru
@dirrm lib/R/library/utils/po/ko/LC_MESSAGES
@dirrm lib/R/library/utils/po/ko
+ at dirrm lib/R/library/utils/po/ja/LC_MESSAGES
+ at dirrm lib/R/library/utils/po/ja
@dirrm lib/R/library/utils/po/fr/LC_MESSAGES
@dirrm lib/R/library/utils/po/fr
@dirrm lib/R/library/utils/po/en at quot/LC_MESSAGES
@@ -8585,6 +8723,8 @@
@dirrm lib/R/library/utils/R
@dirrm lib/R/library/utils/Meta
@dirrm lib/R/library/utils
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+ at dirrm lib/R/library/tools/po/zh_CN
@dirrm lib/R/library/tools/po/ru/LC_MESSAGES
@dirrm lib/R/library/tools/po/ru
@dirrm lib/R/library/tools/po/pt_BR/LC_MESSAGES
@@ -8609,6 +8749,8 @@
@dirrm lib/R/library/tools/R
@dirrm lib/R/library/tools/Meta
@dirrm lib/R/library/tools
+ at dirrm lib/R/library/tcltk/po/zh_CN/LC_MESSAGES
+ at dirrm lib/R/library/tcltk/po/zh_CN
@dirrm lib/R/library/tcltk/po/ru/LC_MESSAGES
@dirrm lib/R/library/tcltk/po/ru
@dirrm lib/R/library/tcltk/po/pt_BR/LC_MESSAGES
@@ -8625,7 +8767,7 @@
@dirrm lib/R/library/tcltk/po/en at quot
@dirrm lib/R/library/tcltk/po
@dirrm lib/R/library/tcltk/man
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+ at dirrm lib/R/library/tcltk/libs
@dirrm lib/R/library/tcltk/latex
@dirrm lib/R/library/tcltk/html
@dirrm lib/R/library/tcltk/help
@@ -8645,6 +8787,8 @@
@dirrm lib/R/library/survival/R
@dirrm lib/R/library/survival/Meta
@dirrm lib/R/library/survival
+ at dirrm lib/R/library/stats4/po/zh_CN/LC_MESSAGES
+ at dirrm lib/R/library/stats4/po/zh_CN
@dirrm lib/R/library/stats4/po/ru/LC_MESSAGES
@dirrm lib/R/library/stats4/po/ru
@dirrm lib/R/library/stats4/po/pt_BR/LC_MESSAGES
@@ -8695,6 +8839,8 @@
@dirrm lib/R/library/stats/R
@dirrm lib/R/library/stats/Meta
@dirrm lib/R/library/stats
+ at dirrm lib/R/library/splines/po/zh_CN/LC_MESSAGES
+ at dirrm lib/R/library/splines/po/zh_CN
@dirrm lib/R/library/splines/po/ru/LC_MESSAGES
@dirrm lib/R/library/splines/po/ru
@dirrm lib/R/library/splines/po/pt_BR/LC_MESSAGES
@@ -8747,6 +8893,15 @@
@dirrm lib/R/library/rpart/R
@dirrm lib/R/library/rpart/Meta
@dirrm lib/R/library/rpart
+ at dirrm lib/R/library/rcompgen/man
+ at dirrm lib/R/library/rcompgen/latex
+ at dirrm lib/R/library/rcompgen/html
+ at dirrm lib/R/library/rcompgen/help
+ at dirrm lib/R/library/rcompgen/examples
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@dirrm lib/R/library/nnet/po/fr/LC_MESSAGES
@dirrm lib/R/library/nnet/po/fr
@dirrm lib/R/library/nnet/po/en at quot/LC_MESSAGES
@@ -8789,10 +8944,14 @@
@dirrm lib/R/library/mgcv
@dirrm lib/R/library/methods/po/zh_CN/LC_MESSAGES
@dirrm lib/R/library/methods/po/zh_CN
+ at dirrm lib/R/library/methods/po/ru/LC_MESSAGES
+ at dirrm lib/R/library/methods/po/ru
@dirrm lib/R/library/methods/po/pt_BR/LC_MESSAGES
@dirrm lib/R/library/methods/po/pt_BR
@dirrm lib/R/library/methods/po/ko/LC_MESSAGES
@dirrm lib/R/library/methods/po/ko
+ at dirrm lib/R/library/methods/po/ja/LC_MESSAGES
+ at dirrm lib/R/library/methods/po/ja
@dirrm lib/R/library/methods/po/fr/LC_MESSAGES
@dirrm lib/R/library/methods/po/fr
@dirrm lib/R/library/methods/po/en at quot/LC_MESSAGES
@@ -8818,6 +8977,8 @@
@dirrm lib/R/library/lattice/R
@dirrm lib/R/library/lattice/Meta
@dirrm lib/R/library/lattice
+ at dirrm lib/R/library/grid/po/zh_CN/LC_MESSAGES
+ at dirrm lib/R/library/grid/po/zh_CN
@dirrm lib/R/library/grid/po/ru/LC_MESSAGES
@dirrm lib/R/library/grid/po/ru
@dirrm lib/R/library/grid/po/pt_BR/LC_MESSAGES
@@ -8843,6 +9004,8 @@
@dirrm lib/R/library/grid/R
@dirrm lib/R/library/grid/Meta
@dirrm lib/R/library/grid
+ at dirrm lib/R/library/graphics/po/zh_CN/LC_MESSAGES
+ at dirrm lib/R/library/graphics/po/zh_CN
@dirrm lib/R/library/graphics/po/ru/LC_MESSAGES
@dirrm lib/R/library/graphics/po/ru
@dirrm lib/R/library/graphics/po/ko/LC_MESSAGES
@@ -8865,6 +9028,8 @@
@dirrm lib/R/library/graphics/R
@dirrm lib/R/library/graphics/Meta
@dirrm lib/R/library/graphics
+ at dirrm lib/R/library/grDevices/po/zh_CN/LC_MESSAGES
+ at dirrm lib/R/library/grDevices/po/zh_CN
@dirrm lib/R/library/grDevices/po/ru/LC_MESSAGES
@dirrm lib/R/library/grDevices/po/ru
@dirrm lib/R/library/grDevices/po/ko/LC_MESSAGES
@@ -8873,8 +9038,6 @@
@dirrm lib/R/library/grDevices/po/ja
@dirrm lib/R/library/grDevices/po/it/LC_MESSAGES
@dirrm lib/R/library/grDevices/po/it
- at dirrm lib/R/library/grDevices/po/grDevices-zh_CN/LC_MESSAGES
- at dirrm lib/R/library/grDevices/po/grDevices-zh_CN
@dirrm lib/R/library/grDevices/po/fr/LC_MESSAGES
@dirrm lib/R/library/grDevices/po/fr
@dirrm lib/R/library/grDevices/po/en_GB/LC_MESSAGES
@@ -8917,6 +9080,14 @@
@dirrm lib/R/library/datasets/R
@dirrm lib/R/library/datasets/Meta
@dirrm lib/R/library/datasets
+ at dirrm lib/R/library/codetools/man
+ at dirrm lib/R/library/codetools/latex
+ at dirrm lib/R/library/codetools/html
+ at dirrm lib/R/library/codetools/help
+ at dirrm lib/R/library/codetools/R-ex
+ at dirrm lib/R/library/codetools/R
+ at dirrm lib/R/library/codetools/Meta
+ at dirrm lib/R/library/codetools
@dirrm lib/R/library/cluster/man
@dirrm lib/R/library/cluster/libs
@dirrm lib/R/library/cluster/latex
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